Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PITPNM2 Sequence: fasta or formatted (1349aa) NCBI GI: 24308237
Description:

phosphatidylinositol transfer protein, membrane-associated 2

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5        101           3
 C cysteine            1.5         20           2
 D aspartate           5.4         73           2
 E glutamate           5.7         77           2
 F phenylalanine       3.5         47           2
 G glycine             7.6        103          11
 H histidine           3.3         45           1
 I isoleucine          4.4         59           2
 K lysine              4.2         56           2
 L leucine             8.7        117           3
 M methionine          2.2         30           1
 N asparagine          2.7         36           2
 P proline             6.7         91           2
 Q glutamine           4.5         61           3
 R arginine            6.4         87           2
 S serine             10.1        136           4
 T threonine           5.0         67           2
 V valine              6.2         84           2
 W tryptophan          1.3         18           2
 Y tyrosine            3.0         41           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidylinositol transfer protein, membrane-asso... 
PITPNM1               0.492   phosphatidylinositol transfer protein, membrane-ass...
PITPNM1               0.491   phosphatidylinositol transfer protein, membrane-ass...
PITPNM3               0.384   PITPNM family member 3 
PITPNC1               0.078   phosphatidylinositol transfer protein, cytoplasmic 1...
PITPNC1               0.077   phosphatidylinositol transfer protein, cytoplasmic 1...
PITPNA                0.075   phosphatidylinositol transfer protein, alpha 
PITPNB                0.073   phosphatidylinositol transfer protein, beta 
DDHD1                 0.013   DDHD domain containing 1 isoform b 
DDHD1                 0.013   DDHD domain containing 1 isoform a 
KCNMA1                0.010   large conductance calcium-activated potassium chann...
KCNMA1                0.010   large conductance calcium-activated potassium chann...
KCNMA1                0.010   large conductance calcium-activated potassium channe...
KCNMA1                0.010   large conductance calcium-activated potassium channe...
PURA                  0.010   purine-rich element binding protein A 
DDHD1                 0.010   DDHD domain containing 1 isoform c 
YEATS2                0.009   YEATS domain containing 2 
HOXB3                 0.008   homeobox B3 
AR                    0.008   androgen receptor isoform 1 
POU4F2                0.008   Brn3b POU domain transcription factor 
RALY                  0.008   RNA binding protein (autoantigenic, hnRNP-associated ...
RALY                  0.008   RNA binding protein (autoantigenic, hnRNP-associated...
TCF7L1                0.008   HMG-box transcription factor TCF-3 
ZIC2                  0.008   zinc finger protein of the cerebellum 2 
SEC23IP               0.008   Sec23-interacting protein p125 
ARID1B                0.008   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.008   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.008   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
EVX2                  0.007   even-skipped homeobox 2 
POU3F3                0.007   POU class 3 homeobox 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press