Guide to the Human Genome
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Name: FLJ46210 Sequence: fasta or formatted (262aa) NCBI GI: 197927231
Description:

hypothetical protein LOC389152

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.7         28           2
 C cysteine            2.7          7           1
 D aspartate           5.0         13           1
 E glutamate          10.3         27           3
 F phenylalanine       2.3          6           1
 G glycine             7.6         20           2
 H histidine           1.5          4           1
 I isoleucine          1.9          5           1
 K lysine              0.8          2           1
 L leucine             9.9         26           2
 M methionine          1.9          5           1
 N asparagine          0.4          1           1
 P proline            14.5         38           2
 Q glutamine           2.3          6           2
 R arginine            6.5         17           3
 S serine             10.3         27           2
 T threonine           1.1          3           1
 V valine              7.6         20           3
 W tryptophan          1.5          4           2
 Y tyrosine            1.1          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC389152 
LOC389151             0.802   hypothetical protein LOC389151 
LOC729627             0.790   hypothetical protein LOC729627 
LOC100131608          0.037   PREDICTED: hypothetical protein 
LOC100133251          0.037   PREDICTED: hypothetical protein 
LOC100131608          0.037   PREDICTED: hypothetical protein 
SYNJ1                 0.029   synaptojanin 1 isoform d 
EMILIN2               0.029   elastin microfibril interfacer 2 
MXRA7                 0.027   transmembrane anchor protein 1 isoform 3 
MXRA7                 0.027   transmembrane anchor protein 1 isoform 2 
MXRA7                 0.027   transmembrane anchor protein 1 isoform 1 
LOC100293874          0.025   PREDICTED: hypothetical protein 
PRR12                 0.025   proline rich 12 
ENAH                  0.023   enabled homolog isoform a 
ENAH                  0.023   enabled homolog isoform b 
RTN4                  0.023   reticulon 4 isoform B 
RTN4                  0.023   reticulon 4 isoform D 
RTN4                  0.023   reticulon 4 isoform A 
MLL2                  0.023   myeloid/lymphoid or mixed-lineage leukemia 2 
IRS2                  0.023   insulin receptor substrate 2 
ARAP3                 0.023   ArfGAP with RhoGAP domain, ankyrin repeat and PH dom...
UBN2                  0.021   ubinuclein 2 
LOC100291797          0.021   PREDICTED: hypothetical protein XP_002345651 
LOC100291443          0.021   PREDICTED: hypothetical protein XP_002346504 
LOC100289394          0.021   PREDICTED: hypothetical protein XP_002342316 
GAS2L1                0.021   growth arrest-specific 2 like 1 isoform a 
GAS2L1                0.021   growth arrest-specific 2 like 1 isoform a 
KIAA1671              0.019   hypothetical protein LOC85379 
LOC100289134          0.019   PREDICTED: hypothetical protein XP_002343933 
ZFHX4                 0.019   zinc finger homeodomain 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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