Guide to the Human Genome
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Name: EMILIN2 Sequence: fasta or formatted (1053aa) NCBI GI: 60498978
Description:

elastin microfibril interfacer 2

Referenced in:

Complement
Extracellular Matrix

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         72           3
 C cysteine            2.1         22           2
 D aspartate           5.2         55           2
 E glutamate           7.3         77           2
 F phenylalanine       2.5         26           1
 G glycine             8.2         86           2
 H histidine           2.2         23           1
 I isoleucine          2.6         27           1
 K lysine              5.5         58           2
 L leucine             9.1         96           2
 M methionine          1.7         18           2
 N asparagine          4.2         44           2
 P proline             7.8         82           4
 Q glutamine           6.1         64           3
 R arginine            5.8         61           2
 S serine              7.1         75           2
 T threonine           5.6         59           2
 V valine              6.9         73           3
 W tryptophan          1.0         11           1
 Y tyrosine            2.3         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   elastin microfibril interfacer 2 
EMILIN1               0.120   elastin microfibril interfacer 1 
EMILIN3               0.093   elastin microfibril interfacer 3 
EMID2                 0.030   EMI domain containing 2 
MMRN1                 0.028   multimerin 1 
C1QL2                 0.027   complement component 1, q subcomponent-like 2 [Homo...
EMID1                 0.026   EMI domain containing 1 
COL8A2                0.025   collagen, type VIII, alpha 2 
C1QL4                 0.024   complement component 1, q subcomponent-like 4 
COL10A1               0.024   type X collagen alpha 1 precursor 
C1QTNF7               0.024   C1q and tumor necrosis factor related protein 7 isof...
C1QTNF7               0.024   C1q and tumor necrosis factor related protein 7 iso...
C1QTNF7               0.024   C1q and tumor necrosis factor related protein 7 iso...
COL8A1                0.023   alpha 1 type VIII collagen precursor 
COL8A1                0.023   alpha 1 type VIII collagen precursor 
COLEC12               0.022   collectin sub-family member 12 
C1QTNF2               0.021   C1q and tumor necrosis factor related protein 2 [Hom...
MMRN2                 0.021   multimerin 2 precursor 
C1QL1                 0.020   complement component 1, q subcomponent-like 1 
COL3A1                0.019   collagen type III alpha 1 preproprotein 
COL4A5                0.018   type IV collagen alpha 5 isoform 1 precursor 
COL11A1               0.018   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.018   alpha 1 type XI collagen isoform C preproprotein [Ho...
COL11A1               0.018   alpha 1 type XI collagen isoform A preproprotein [Ho...
COL4A5                0.018   type IV collagen alpha 5 isoform 3 precursor 
COL4A3                0.018   alpha 3 type IV collagen isoform 5 precursor 
COL4A3                0.018   alpha 3 type IV collagen isoform 4 precursor 
COL4A3                0.018   alpha 3 type IV collagen isoform 2 precursor 
COL4A3                0.018   alpha 3 type IV collagen isoform 1 precursor 
COL1A1                0.018   alpha 1 type I collagen preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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