LEPRE1 9975

Name: LEPRE1	Sequence: fasta or formatted (736aa)		NCBI GI: 186928835
Description: leprecan 1 isoform 1		Referenced in: Collagen
Other entries for this name: alt prot [697aa] leprecan 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.2 68 3 C cysteine 2.0 15 1 D aspartate 5.0 37 2 E glutamate 9.6 71 2 F phenylalanine 4.3 32 2 G glycine 5.4 40 2 H histidine 2.3 17 1 I isoleucine 2.3 17 1 K lysine 4.2 31 1 L leucine 10.3 76 2 M methionine 2.2 16 1 N asparagine 3.4 25 1 P proline 5.4 40 2 Q glutamine 5.2 38 2 R arginine 6.0 44 2 S serine 6.1 45 2 T threonine 4.8 35 2 V valine 6.2 46 2 W tryptophan 0.8 6 1 Y tyrosine 5.0 37 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 leprecan 1 isoform 1 LEPRE1 0.933 leprecan 1 isoform 2 LEPREL1 0.438 leprecan-like 1 isoform a LEPREL2 0.366 leprecan-like 2 LEPREL1 0.352 leprecan-like 1 isoform b CRTAP 0.129 cartilage associated protein precursor SC65 0.110 synaptonemal complex protein SC65 LOC100134403 0.034 PREDICTED: similar to cartilage associated protein ... C17orf101 0.022 hypothetical protein LOC79701 isoform 1 P4HA3 0.008 prolyl 4-hydroxylase, alpha III subunit precursor [H... NOP14 0.007 probable nucleolar complex protein 14 EGLN2 0.005 EGL nine (C.elegans) homolog 2 EGLN2 0.005 EGL nine (C.elegans) homolog 2 EGLN1 0.005 egl nine homolog 1 RBBP6 0.005 retinoblastoma-binding protein 6 isoform 2 RBBP6 0.005 retinoblastoma-binding protein 6 isoform 1 RAPH1 0.005 Ras association and pleckstrin homology domains 1 is... RTN4 0.005 reticulon 4 isoform E RTN4 0.005 reticulon 4 isoform A EP400 0.005 E1A binding protein p400 C1orf173 0.005 hypothetical protein LOC127254 FARP1 0.004 FERM, RhoGEF, and pleckstrin domain protein 1 isoform... P4HA1 0.004 prolyl 4-hydroxylase, alpha I subunit isoform 1 prec... P4HA1 0.004 prolyl 4-hydroxylase, alpha I subunit isoform 3 pre... P4HA1 0.004 prolyl 4-hydroxylase, alpha I subunit isoform 2 pre... P4HA1 0.004 prolyl 4-hydroxylase, alpha I subunit isoform 2 prec... EGLN3 0.003 egl nine homolog 3 EIF4ENIF1 0.003 eukaryotic translation initiation factor 4E nuclear i... C7orf58 0.003 hypothetical protein LOC79974 isoform 2 C7orf58 0.003 hypothetical protein LOC79974 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.