Guide to the Human Genome
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Name: EGLN2 Sequence: fasta or formatted (407aa) NCBI GI: 16604260
Description:

EGL nine (C.elegans) homolog 2

Referenced in:

Oxygen Sensing and Hemoglobin

Other entries for this name:
alt mRNA [407aa] EGL nine (C.elegans) homolog 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.8         44           3
 C cysteine            3.2         13           1
 D aspartate           4.2         17           1
 E glutamate           6.1         25           2
 F phenylalanine       1.5          6           1
 G glycine            11.1         45           2
 H histidine           2.0          8           1
 I isoleucine          3.4         14           1
 K lysine              3.2         13           1
 L leucine             7.9         32           2
 M methionine          1.7          7           1
 N asparagine          2.0          8           1
 P proline             9.3         38           2
 Q glutamine           4.7         19           1
 R arginine            7.9         32           2
 S serine              7.4         30           3
 T threonine           2.9         12           2
 V valine              5.9         24           2
 W tryptophan          1.5          6           1
 Y tyrosine            3.4         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   EGL nine (C.elegans) homolog 2 
EGLN2                 1.000   EGL nine (C.elegans) homolog 2 
EGLN1                 0.374   egl nine homolog 1 
EGLN3                 0.334   egl nine homolog 3 
KIAA1543              0.020   NEZHA isoform 2 
KIAA1543              0.020   NEZHA isoform 1 
LOC651856             0.017   PREDICTED: similar to hCG2023245 
TNS1                  0.015   tensin 
EPHB6                 0.015   ephrin receptor EphB6 precursor 
LOC441056             0.015   PREDICTED: double homeobox, 4-like 
PRR12                 0.015   proline rich 12 
LOC100292721          0.013   PREDICTED: hypothetical protein 
ATG9B                 0.013   ATG9 autophagy related 9 homolog B 
TTBK1                 0.013   tau tubulin kinase 1 
AGAP2                 0.012   centaurin, gamma 1 isoform PIKE-L 
LOC100289661          0.012   PREDICTED: hypothetical protein 
LOC100289661          0.012   PREDICTED: hypothetical protein XP_002343723 
SPEG                  0.011   SPEG complex locus 
CNOT3                 0.011   CCR4-NOT transcription complex, subunit 3 
CCDC24                0.011   coiled-coil domain containing 24 
GNAS                  0.011   GNAS complex locus XLas 
HOXA11                0.010   homeobox A11 
BSN                   0.010   bassoon protein 
AMELY                 0.010   amelogenin, Y-linked precursor 
LOC100129129          0.010   PREDICTED: hypothetical protein 
LEPRE1                0.010   leprecan 1 isoform 1 
JSRP1                 0.010   junctional sarcoplasmic reticulum protein 1 
E4F1                  0.010   p120E4F 
FAM171A2              0.010   family with sequence similarity 171, member A2 [Hom...
CUX1                  0.010   cut-like homeobox 1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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