CRTAP 32538

Name: CRTAP	Sequence: fasta or formatted (401aa)		NCBI GI: 5453601
Description: cartilage associated protein precursor		Referenced in: Bone and Related Tissues Collagen
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.5 42 3 C cysteine 2.7 11 1 D aspartate 6.0 24 3 E glutamate 9.0 36 2 F phenylalanine 5.7 23 2 G glycine 4.0 16 2 H histidine 2.7 11 1 I isoleucine 2.5 10 1 K lysine 5.2 21 1 L leucine 11.5 46 2 M methionine 2.2 9 2 N asparagine 3.2 13 2 P proline 4.7 19 1 Q glutamine 4.0 16 2 R arginine 6.7 27 2 S serine 5.0 20 1 T threonine 2.5 10 2 V valine 4.2 17 2 W tryptophan 0.7 3 1 Y tyrosine 6.7 27 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cartilage associated protein precursor SC65 0.491 synaptonemal complex protein SC65 LOC100134403 0.390 PREDICTED: similar to cartilage associated protein ... LEPRE1 0.236 leprecan 1 isoform 1 LEPRE1 0.236 leprecan 1 isoform 2 LEPREL1 0.206 leprecan-like 1 isoform a LEPREL2 0.115 leprecan-like 2 LEPREL1 0.094 leprecan-like 1 isoform b P4HA3 0.021 prolyl 4-hydroxylase, alpha III subunit precursor [H... FRAS1 0.009 Fraser syndrome 1 CCDC42B 0.007 coiled-coil domain containing 42B BRD9 0.007 bromodomain containing 9 isoform 1 GTF2I 0.006 general transcription factor II, i isoform 3 GTF2I 0.006 general transcription factor II, i isoform 2 GTF2I 0.006 general transcription factor II, i isoform 1 GTF2I 0.006 general transcription factor II, i isoform 4 FAM55B 0.006 hypothetical protein LOC120406 RORA 0.005 RAR-related orphan receptor A isoform d RORA 0.005 RAR-related orphan receptor A isoform c RORA 0.005 RAR-related orphan receptor A isoform b RORA 0.005 RAR-related orphan receptor A isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.