C1orf173 36484

Name: C1orf173	Sequence: fasta or formatted (1530aa)		NCBI GI: 83921609
Description: hypothetical protein LOC127254		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.0 138 3 C cysteine 0.8 12 2 D aspartate 5.0 77 2 E glutamate 15.8 242 4 F phenylalanine 1.9 29 2 G glycine 7.8 120 3 H histidine 2.1 32 2 I isoleucine 2.9 44 2 K lysine 7.8 119 3 L leucine 7.3 112 2 M methionine 2.3 35 2 N asparagine 3.3 51 2 P proline 5.1 78 3 Q glutamine 3.5 54 2 R arginine 5.8 89 4 S serine 7.5 114 3 T threonine 5.4 83 2 V valine 4.9 75 3 W tryptophan 0.3 5 1 Y tyrosine 1.4 21 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC127254 RP1L1 0.030 retinitis pigmentosa 1-like 1 RPGR 0.026 retinitis pigmentosa GTPase regulator isoform C [Hom... PCLO 0.021 piccolo isoform 2 PCLO 0.021 piccolo isoform 1 ATRX 0.020 transcriptional regulator ATRX isoform 2 PLEC1 0.019 plectin 1 isoform 11 PLEC1 0.019 plectin 1 isoform 10 PLEC1 0.019 plectin 1 isoform 8 PLEC1 0.019 plectin 1 isoform 7 PLEC1 0.019 plectin 1 isoform 6 PLEC1 0.019 plectin 1 isoform 3 PLEC1 0.019 plectin 1 isoform 2 PLEC1 0.019 plectin 1 isoform 1 MYH6 0.018 myosin heavy chain 6 NEFH 0.017 neurofilament, heavy polypeptide 200kDa BOD1L 0.016 biorientation of chromosomes in cell division 1-like... NES 0.016 nestin AKAP12 0.016 A kinase (PRKA) anchor protein 12 isoform 1 AKAP12 0.016 A kinase (PRKA) anchor protein 12 isoform 2 MYH10 0.015 myosin, heavy polypeptide 10, non-muscle TCHH 0.015 trichohyalin NUMA1 0.015 nuclear mitotic apparatus protein 1 MYH8 0.015 myosin, heavy chain 8, skeletal muscle, perinatal [... GOLIM4 0.015 golgi integral membrane protein 4 MYH11 0.014 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.014 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... NEFM 0.014 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.014 neurofilament, medium polypeptide 150kDa isoform 2 ... EIF5B 0.014 eukaryotic translation initiation factor 5B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.