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Search of human proteins with 170763513
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|170763513 ATP/GTP binding protein 1 [Homo sapiens]
(1186 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|170763513 ATP/GTP binding protein 1 [Homo sapiens] 2395 0.0
gi|120444924 ATP/GTP binding protein-like 1 [Homo sapiens] 709 0.0
gi|222352158 carboxypeptidase 3, cytosolic [Homo sapiens] 355 1e-97
gi|31657119 carboxypeptidase 2, cytosolic [Homo sapiens] 332 1e-90
gi|190194403 ATP/GTP binding protein-like 4 [Homo sapiens] 208 2e-53
gi|118421091 ATP/GTP binding protein-like 5 isoform 1 [Homo sapi... 148 3e-35
gi|78482633 ATP/GTP binding protein-like 5 isoform 3 [Homo sapiens] 148 3e-35
gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens] 37 0.086
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 36 0.19
gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo... 35 0.33
gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo... 35 0.33
gi|193083197 ubiquitin-like domain containing CTD phosphatase 1 ... 35 0.42
gi|156071452 nardilysin isoform b [Homo sapiens] 34 0.95
gi|156071450 nardilysin isoform a [Homo sapiens] 34 0.95
gi|42542392 CCAAT/enhancer binding protein zeta [Homo sapiens] 33 1.2
gi|62526045 zinc finger protein 638 [Homo sapiens] 33 1.6
gi|21626468 zinc finger protein 638 [Homo sapiens] 33 1.6
gi|38569484 kinesin family member 21A [Homo sapiens] 33 2.1
gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens] 33 2.1
gi|239743493 PREDICTED: hypothetical protein XP_002342862 [Homo ... 32 2.8
gi|93141047 collagen, type XII, alpha 1 long isoform precursor [... 32 2.8
gi|222446616 hypothetical protein LOC341346 [Homo sapiens] 32 3.6
gi|239752832 PREDICTED: similar to SET translocation [Homo sapiens] 32 3.6
gi|239747380 PREDICTED: similar to SET translocation [Homo sapiens] 32 3.6
gi|239741205 PREDICTED: similar to SET translocation [Homo sapiens] 32 3.6
gi|61743916 carboxypeptidase A4 preproprotein [Homo sapiens] 32 3.6
gi|51873049 hypothetical protein LOC8603 [Homo sapiens] 32 3.6
gi|120431745 huntingtin-associated protein 1 isoform 4 [Homo sap... 32 3.6
gi|120431743 huntingtin-associated protein 1 isoform 3 [Homo sap... 32 3.6
gi|120431738 huntingtin-associated protein 1 isoform 2 [Homo sap... 32 3.6
>gi|170763513 ATP/GTP binding protein 1 [Homo sapiens]
Length = 1186
Score = 2395 bits (6206), Expect = 0.0
Identities = 1186/1186 (100%), Positives = 1186/1186 (100%)
Query: 1 MSKLKVIPEKSLTNNSRIVGLLAQLEKINAEPSESDTARYVTSKILHLAQSQEKTRREMT 60
MSKLKVIPEKSLTNNSRIVGLLAQLEKINAEPSESDTARYVTSKILHLAQSQEKTRREMT
Sbjct: 1 MSKLKVIPEKSLTNNSRIVGLLAQLEKINAEPSESDTARYVTSKILHLAQSQEKTRREMT 60
Query: 61 AKGSTGMEILLSTLENTKDLQTTLNILSILVELVSAGGGRRVSFLVTKGGSQILLQLLMN 120
AKGSTGMEILLSTLENTKDLQTTLNILSILVELVSAGGGRRVSFLVTKGGSQILLQLLMN
Sbjct: 61 AKGSTGMEILLSTLENTKDLQTTLNILSILVELVSAGGGRRVSFLVTKGGSQILLQLLMN 120
Query: 121 ASKESPPHEDLMVQIHSILAKIGPKDKKFGVKARINGALNITLNLVKQNLQNHRLVLPCL 180
ASKESPPHEDLMVQIHSILAKIGPKDKKFGVKARINGALNITLNLVKQNLQNHRLVLPCL
Sbjct: 121 ASKESPPHEDLMVQIHSILAKIGPKDKKFGVKARINGALNITLNLVKQNLQNHRLVLPCL 180
Query: 181 QLLRVYSANSVNSVSLGKNGVVELMFKIIGPFSKKNSSLIKVALDTLAALLKSKTNARRA 240
QLLRVYSANSVNSVSLGKNGVVELMFKIIGPFSKKNSSLIKVALDTLAALLKSKTNARRA
Sbjct: 181 QLLRVYSANSVNSVSLGKNGVVELMFKIIGPFSKKNSSLIKVALDTLAALLKSKTNARRA 240
Query: 241 VDRGYVQVLLTIYVDWHRHDNRHRNMLIRKGILQSLKSVTNIKLGRKAFIDANGMKILYN 300
VDRGYVQVLLTIYVDWHRHDNRHRNMLIRKGILQSLKSVTNIKLGRKAFIDANGMKILYN
Sbjct: 241 VDRGYVQVLLTIYVDWHRHDNRHRNMLIRKGILQSLKSVTNIKLGRKAFIDANGMKILYN 300
Query: 301 TSQLPVIPVTGPVAQLYSLPPEVDDVVDESDDNDDIDVEAENETENEDDLDQNFKNDDIE 360
TSQLPVIPVTGPVAQLYSLPPEVDDVVDESDDNDDIDVEAENETENEDDLDQNFKNDDIE
Sbjct: 301 TSQLPVIPVTGPVAQLYSLPPEVDDVVDESDDNDDIDVEAENETENEDDLDQNFKNDDIE 360
Query: 361 TDINKLKPQQEPGRTIEDLKMYEHLFPELVDDFQDYDLISKEPKPFVFEGKVRGPIVVPT 420
TDINKLKPQQEPGRTIEDLKMYEHLFPELVDDFQDYDLISKEPKPFVFEGKVRGPIVVPT
Sbjct: 361 TDINKLKPQQEPGRTIEDLKMYEHLFPELVDDFQDYDLISKEPKPFVFEGKVRGPIVVPT 420
Query: 421 AGEETSGNSGNLRKVVMKENISSKGDEGEKKSTFMDLAKEDIKDNDRTLQQQPGDQNRTI 480
AGEETSGNSGNLRKVVMKENISSKGDEGEKKSTFMDLAKEDIKDNDRTLQQQPGDQNRTI
Sbjct: 421 AGEETSGNSGNLRKVVMKENISSKGDEGEKKSTFMDLAKEDIKDNDRTLQQQPGDQNRTI 480
Query: 481 SSVHGLNNDIVKALDRITLQNIPSQTAPGFTAEMKKDCSLPLTVLTCAKACPHMATCGNV 540
SSVHGLNNDIVKALDRITLQNIPSQTAPGFTAEMKKDCSLPLTVLTCAKACPHMATCGNV
Sbjct: 481 SSVHGLNNDIVKALDRITLQNIPSQTAPGFTAEMKKDCSLPLTVLTCAKACPHMATCGNV 540
Query: 541 LFEGRTVQLGKLCCTGVETEDDEDTESNSSVEQASVEVPDGPTLHDPDLYIEIVKNTKSV 600
LFEGRTVQLGKLCCTGVETEDDEDTESNSSVEQASVEVPDGPTLHDPDLYIEIVKNTKSV
Sbjct: 541 LFEGRTVQLGKLCCTGVETEDDEDTESNSSVEQASVEVPDGPTLHDPDLYIEIVKNTKSV 600
Query: 601 PEYSEVAYPDYFGHIPPPFKEPILERPYGVQRTKIAQDIERLIHQSDIIDRVVYDLDNPN 660
PEYSEVAYPDYFGHIPPPFKEPILERPYGVQRTKIAQDIERLIHQSDIIDRVVYDLDNPN
Sbjct: 601 PEYSEVAYPDYFGHIPPPFKEPILERPYGVQRTKIAQDIERLIHQSDIIDRVVYDLDNPN 660
Query: 661 YTIPEEGDILKFNSKFESGNLRKVIQIRKNEYDLILNSDINSNHYHQWFYFEVSGMRPGV 720
YTIPEEGDILKFNSKFESGNLRKVIQIRKNEYDLILNSDINSNHYHQWFYFEVSGMRPGV
Sbjct: 661 YTIPEEGDILKFNSKFESGNLRKVIQIRKNEYDLILNSDINSNHYHQWFYFEVSGMRPGV 720
Query: 721 AYRFNIINCEKSNSQFNYGMQPLMYSVQEALNARPWWIRMGTDICYYKNHFSRSSVAAGG 780
AYRFNIINCEKSNSQFNYGMQPLMYSVQEALNARPWWIRMGTDICYYKNHFSRSSVAAGG
Sbjct: 721 AYRFNIINCEKSNSQFNYGMQPLMYSVQEALNARPWWIRMGTDICYYKNHFSRSSVAAGG 780
Query: 781 QKGKSYYTITFTVNFPHKDDVCYFAYHYPYTYSTLQMHLQKLESAHNPQQIYFRKDVLCE 840
QKGKSYYTITFTVNFPHKDDVCYFAYHYPYTYSTLQMHLQKLESAHNPQQIYFRKDVLCE
Sbjct: 781 QKGKSYYTITFTVNFPHKDDVCYFAYHYPYTYSTLQMHLQKLESAHNPQQIYFRKDVLCE 840
Query: 841 TLSGNSCPLVTITAMPESNYYEHICHFRNRPYVFLSARVHPGETNASWVMKGTLEYLMSN 900
TLSGNSCPLVTITAMPESNYYEHICHFRNRPYVFLSARVHPGETNASWVMKGTLEYLMSN
Sbjct: 841 TLSGNSCPLVTITAMPESNYYEHICHFRNRPYVFLSARVHPGETNASWVMKGTLEYLMSN 900
Query: 901 NPTAQSLRESYIFKIVPMLNPDGVINGNHRCSLSGEDLNRQWQSPSPDLHPTIYHAKGLL 960
NPTAQSLRESYIFKIVPMLNPDGVINGNHRCSLSGEDLNRQWQSPSPDLHPTIYHAKGLL
Sbjct: 901 NPTAQSLRESYIFKIVPMLNPDGVINGNHRCSLSGEDLNRQWQSPSPDLHPTIYHAKGLL 960
Query: 961 QYLAAVKRLPLVYCDYHGHSRKKNVFMYGCSIKETVWHTNDNATSCDVVEDTGYRTLPKI 1020
QYLAAVKRLPLVYCDYHGHSRKKNVFMYGCSIKETVWHTNDNATSCDVVEDTGYRTLPKI
Sbjct: 961 QYLAAVKRLPLVYCDYHGHSRKKNVFMYGCSIKETVWHTNDNATSCDVVEDTGYRTLPKI 1020
Query: 1021 LSHIAPAFCMSSCSFVVEKSKESTARVVVWREIGVQRSYTMESTLCGCDQGKYKGLQIGT 1080
LSHIAPAFCMSSCSFVVEKSKESTARVVVWREIGVQRSYTMESTLCGCDQGKYKGLQIGT
Sbjct: 1021 LSHIAPAFCMSSCSFVVEKSKESTARVVVWREIGVQRSYTMESTLCGCDQGKYKGLQIGT 1080
Query: 1081 RELEEMGAKFCVGLLRLKRLTSPLEYNLPSSLLDFENDLIESSCKVTSPTTYVLDEDEPR 1140
RELEEMGAKFCVGLLRLKRLTSPLEYNLPSSLLDFENDLIESSCKVTSPTTYVLDEDEPR
Sbjct: 1081 RELEEMGAKFCVGLLRLKRLTSPLEYNLPSSLLDFENDLIESSCKVTSPTTYVLDEDEPR 1140
Query: 1141 FLEEVDYSAESNDELDIELAENVGDYEPSAQEEVLSDSELSRTYLP 1186
FLEEVDYSAESNDELDIELAENVGDYEPSAQEEVLSDSELSRTYLP
Sbjct: 1141 FLEEVDYSAESNDELDIELAENVGDYEPSAQEEVLSDSELSRTYLP 1186
>gi|120444924 ATP/GTP binding protein-like 1 [Homo sapiens]
Length = 1066
Score = 709 bits (1830), Expect = 0.0
Identities = 336/561 (59%), Positives = 422/561 (75%), Gaps = 24/561 (4%)
Query: 585 HDPDLYIEIVKNTKSVPEYSEVAYPDYFGHIPPPFKEPILERPYGVQRTKIAQDIERLIH 644
HDP LY+ + T SV ++ +A+PD +GH PPP +P+LER GVQR +I +DI RLI
Sbjct: 463 HDPYLYMAKARRTSSVVDFKMMAFPDVWGHCPPPTTQPMLERKCGVQRIRIFEDIRRLIQ 522
Query: 645 QSDIIDRVVYDLDNPNYTIPEEGDILKFNSKFESGNLRKVIQIRKNEYDLILNSDINSNH 704
SD+I++VV+ LD P + L+F SKFESGNLRK IQ+R+ EYDL++N+D+NS
Sbjct: 523 PSDVINKVVFSLDEPWPLQDNASNCLRFFSKFESGNLRKAIQVREFEYDLLVNADVNSTQ 582
Query: 705 YHQWFYFEVSGMRPGVAYRFNIINCEKSNSQFNYGMQPLMYSVQEALNARPWWIRMGTDI 764
+ QWFYF+VSGM+ + Y FNIINCEK NSQFNYGMQP +YSV+EAL +P WIR G +I
Sbjct: 583 HQQWFYFKVSGMQAAIPYHFNIINCEKPNSQFNYGMQPTLYSVKEALLGKPTWIRTGHEI 642
Query: 765 CYYKNHFSRSSVAAGGQKGKSYYTITFTVNFPHKDDVCYFAYHYPYTYSTLQMHLQKLES 824
CYYKNH+ +S+ AGG GK YYT+TF V FPH +DVCY AYHYPYTY+ L HL LE
Sbjct: 643 CYYKNHYRQSTAVAGGASGKCYYTLTFAVTFPHSEDVCYLAYHYPYTYTALMTHLDILEK 702
Query: 825 AHNPQQIYFRKDVLCETLSGNSCPLVTITAMPESNYYEHICHFRNRPYVFLSARVHPGET 884
+ N +++YFR+DVLC+TL GN CPLVTITAMPESN EH+ FR+RPY ++ARVHPGE+
Sbjct: 703 SVNLKEVYFRQDVLCQTLGGNPCPLVTITAMPESNSDEHLEQFRHRPYQVITARVHPGES 762
Query: 885 NASWVMKGTLEYLMSNNPTAQSLRESYIFKIVPMLNPDGVINGNHRCSLSGEDLNRQWQS 944
NASWVMKGTLE+L+S++P A+ LRE++IFKI+PMLNPDGVINGNHRCSLSGEDLNRQW S
Sbjct: 763 NASWVMKGTLEFLVSSDPVARLLRENFIFKIIPMLNPDGVINGNHRCSLSGEDLNRQWLS 822
Query: 945 PSPDLHPTIYHAKGLLQYLAAVKRLPLVYCDYHGHSRKKNVFMYGCSIKETVWHTNDNAT 1004
PS L PTIYHAKGLL +L+++ R P+V+CD+HGHS+KKNVF+YGCSIKET+W
Sbjct: 823 PSAHLQPTIYHAKGLLYHLSSIGRSPVVFCDFHGHSQKKNVFLYGCSIKETLWQAACTVG 882
Query: 1005 SCDVVEDTGYRTLPKILSHIAPAFCMSSCSFVVEKSKESTARVVVWREIGVQRSYTMEST 1064
+ ++E+ YRTLPKIL +APAF MSSCSF+VEKS+ STARVVVWRE+GV RSYTMES+
Sbjct: 883 TSTILEEVNYRTLPKILDKLAPAFTMSSCSFLVEKSRASTARVVVWREMGVSRSYTMESS 942
Query: 1065 LCGCDQGKY---------------------KGLQIGTRELEEMGAKFCVGLLRLKRLTSP 1103
CGC+QG Y +GLQ GTRELEEMGA FC+GLL L+ ++
Sbjct: 943 YCGCNQGPYQCTQRLLERTKNERAHPVDGLQGLQFGTRELEEMGAMFCLGLLILELKSAS 1002
Query: 1104 LEYNL---PSSLLDFENDLIE 1121
+ L ++LL E D ++
Sbjct: 1003 CSHQLLAQAATLLSAEEDALD 1023
Score = 205 bits (521), Expect = 2e-52
Identities = 120/320 (37%), Positives = 191/320 (59%), Gaps = 32/320 (10%)
Query: 105 LVTKGGSQILLQLLMNASKESPPHEDLMVQIHSILAKIGPKDKKFGVKARINGALNITLN 164
+++KGGS+ LLQ L++ ++ +PP D+++ + +LAK+G +DKK G KA AL++TL
Sbjct: 1 MISKGGSEALLQTLVDTARTAPPDYDILLPLFRLLAKVGLRDKKIGRKALELEALDVTLI 60
Query: 165 LVKQNLQNHRLVLPCLQLLRVYSANSVNSVSLGKNGVVELMFKIIGPFSKKNSSLIKVAL 224
L ++NL + + +L CL LRV++++ LG NG +EL+FK+I P+++K + I+ A
Sbjct: 61 LARKNLSHGQNLLHCLWALRVFASSVSMGAMLGINGAMELLFKVITPYTRKRTQAIRAAT 120
Query: 225 DTLAALLKSKTNARRAVDRGYVQVLLTIYVDWHRHDNRHRNMLIRKGILQSLKSVTNIKL 284
+ LAALLKSK+N RRAV+RGYV LL ++ DWH HD + + IR+G+L L+ + ++
Sbjct: 121 EVLAALLKSKSNGRRAVNRGYVTSLLGLHQDWHSHDTANAYVQIRRGLLLCLRHIAALRS 180
Query: 285 GRKAFIDANGMKILYNTSQ--------LPVIPV----------TGPV-----AQLYSLP- 320
GR+AF+ A GM+IL++T+Q PVI V T P+ + Y+ P
Sbjct: 181 GREAFLAAQGMEILFSTTQNCLDDKSMEPVISVVLQILRQCYPTSPLPLVTASSAYAFPV 240
Query: 321 -----PEVDDVVDESDDNDDIDVEAENETENEDDLDQNFKNDDIETDINKLKPQQEPGRT 375
E + E D DD D E + +++ ED ++DD+ETD+NKL + R
Sbjct: 241 PGCITTEPPHDLPEEDFEDDGDDEVDKDSDTEDG---KVEDDDLETDVNKLSSKPGLDRP 297
Query: 376 IEDLKMYEHLFPELVDDFQD 395
E+L YE + EL F++
Sbjct: 298 EEELMQYEVMCLELSYSFEE 317
>gi|222352158 carboxypeptidase 3, cytosolic [Homo sapiens]
Length = 920
Score = 355 bits (912), Expect = 1e-97
Identities = 186/428 (43%), Positives = 272/428 (63%), Gaps = 31/428 (7%)
Query: 670 LKFNSKFESGNLRKVIQIRKNEYDLILNSDINSNHYHQWFYFEVSGMRPGVAYRFNIINC 729
L F ++FESGNL+KV+++ + EY L + D+ +N + QW+YF+V+ MR G+ YRF I+N
Sbjct: 169 LMFEARFESGNLQKVVKVAEYEYQLTVRPDLFTNKHTQWYYFQVTNMRAGIVYRFTIVNF 228
Query: 730 EKSNSQFNYGMQPLMYSVQEALNARPWWIRMGTDICYYKNHFSRSSVAAGGQKGKSYYTI 789
K S ++ GM+PL YS +EA W R+G I YY+N+ GQ G+ Y+++
Sbjct: 229 TKPASLYSRGMRPLFYSEKEAKAHHIGWQRIGDQIKYYRNN--------PGQDGRHYFSL 280
Query: 790 TFTVNFPHKDDVCYFAYHYPYTYSTLQMHLQKLESAHNPQQIYFRK-DVLCETLSGNSCP 848
T+T FPH D CYFA+ YPYTY+ LQ +L + + +P + F K VLC TL+ N
Sbjct: 281 TWTFQFPHNKDTCYFAHCYPYTYTNLQEYLSGINN--DPVRSKFCKIRVLCHTLARNMVY 338
Query: 849 LVTITAMPESNYYEHICHFRNRPYVFLSARVHPGETNASWVMKGTLEYLMSNNPTAQSLR 908
++TIT +++ R R V L+ARVHPGETN+SW+MKG L+Y++ N+ AQ LR
Sbjct: 339 ILTITTPLKNS------DSRKRKAVILTARVHPGETNSSWIMKGFLDYILGNSSDAQLLR 392
Query: 909 ESYIFKIVPMLNPDGVINGNHRCSLSGEDLNRQWQSPSPDLHPTIYHAKGLLQYLAAVKR 968
++++FK+VPMLNPDGVI GN+RCSL+G DLNR + S + P++++ + ++ L KR
Sbjct: 393 DTFVFKVVPMLNPDGVIVGNYRCSLAGRDLNRNYTSLLKESFPSVWYTRNMVHRLME-KR 451
Query: 969 LPLVYCDYHGHSRKKNVFMYGCSIKETVWHTNDNATSCDVVEDTGYRTLPKILSHIAP-A 1027
++YCD HGHSRK+N+FMYGC +D + + + + R P +LS P
Sbjct: 452 EVILYCDLHGHSRKENIFMYGCD-------GSDRSKTLYLQQ----RIFPLMLSKNCPDK 500
Query: 1028 FCMSSCSFVVEKSKESTARVVVWREIGVQRSYTMESTLCGCDQGKYKGLQIGTRELEEMG 1087
F S+C F V+KSKE T RVV+W+ +G++ S+TME+T CG G +G T++LE MG
Sbjct: 501 FSFSACKFNVQKSKEGTGRVVMWK-MGIRNSFTMEATFCGSTLGNKRGTHFSTKDLESMG 559
Query: 1088 AKFCVGLL 1095
FC LL
Sbjct: 560 YHFCDSLL 567
>gi|31657119 carboxypeptidase 2, cytosolic [Homo sapiens]
Length = 902
Score = 332 bits (851), Expect = 1e-90
Identities = 184/434 (42%), Positives = 261/434 (60%), Gaps = 33/434 (7%)
Query: 664 PEEGDILKFNSKFESGNLRKVIQIRKNEYDLILNSDINSNHYHQWFYFEVSGMRPGVAYR 723
PE+ +L F S+FESGNL+K +++ EY+L L +D+ +N + QWFYF V R YR
Sbjct: 261 PEDNTLL-FESRFESGNLQKAVRVDTYEYELTLRTDLYTNKHTQWFYFRVQNTRKDATYR 319
Query: 724 FNIINCEKSNSQFNYGMQPLMYSVQEALNARPWWIRMGTDICYYKNHFSRSSVAAGGQKG 783
F I+N K S + GM+PL+YS +A W R G +I YYKN+ GQ+
Sbjct: 320 FTIVNLLKPKSLYTVGMKPLLYSQLDANTRNIGWRREGNEIKYYKNNTD------DGQQ- 372
Query: 784 KSYYTITFTVNFPHKDDVCYFAYHYPYTYSTLQMHLQKLESAHNPQQIYFRK-DVLCETL 842
+Y +T+T+ FP+ D C+FA+ YPYTY+ LQ +L L A+NP Q F K LC +L
Sbjct: 373 -PFYCLTWTIQFPYDQDTCFFAHFYPYTYTDLQCYL--LSVANNPIQSQFCKLQTLCRSL 429
Query: 843 SGNSCPLVTITAMPESNYYEHICHFRNRPYVFLSARVHPGETNASWVMKGTLEYLMSNNP 902
+GN+ L+TIT P E + V LSARVHPGE+N SWVMKG L++++SN+P
Sbjct: 430 AGNTVYLLTITN-PSQTPQEAAA----KKAVVLSARVHPGESNGSWVMKGFLDFILSNSP 484
Query: 903 TAQSLRESYIFKIVPMLNPDGVINGNHRCSLSGEDLNRQWQSPSPDLHPTIYHAKGLLQY 962
AQ LR+ ++FK++PMLNPDGVI GN+RCSL+G DLNR +++ + P I++ + +++
Sbjct: 485 DAQLLRDIFVFKVLPMLNPDGVIVGNYRCSLAGRDLNRHYKTILKESFPCIWYTRNMIKR 544
Query: 963 LAAVKRLPLVYCDYHGHSRKKNVFMYGCSIKETVWHTNDNATSCDVVEDTGYRTLPKILS 1022
L +R L+YCD+HGHSRK N+F+YGC+ + ++ R P +L
Sbjct: 545 LLE-EREVLLYCDFHGHSRKNNIFLYGCNNNNRKYWLHE-------------RVFPLMLC 590
Query: 1023 HIAP-AFCMSSCSFVVEKSKESTARVVVWREIGVQRSYTMESTLCGCDQGKYKGLQIGTR 1081
AP F SC+F V+K KE T RVV+WR +G+ SYTMEST G G +
Sbjct: 591 KNAPDKFSFHSCNFKVQKCKEGTGRVVMWR-MGILNSYTMESTFGGSTLGNKRDTHFTIE 649
Query: 1082 ELEEMGAKFCVGLL 1095
+L+ +G C LL
Sbjct: 650 DLKSLGYHVCDTLL 663
>gi|190194403 ATP/GTP binding protein-like 4 [Homo sapiens]
Length = 503
Score = 208 bits (530), Expect = 2e-53
Identities = 133/385 (34%), Positives = 199/385 (51%), Gaps = 41/385 (10%)
Query: 664 PEEGDILKFNSKFESGNLRKVIQIRKNEYDLILNSDINSNHYHQWFYFEVSGMRPGVAYR 723
P++G ++ F++ FESGNL +V Q+ + EYDL + D + + WF F V ++
Sbjct: 39 PKKGHLI-FDACFESGNLGRVDQVSEFEYDLFIRPDTCNPRFRVWFNFTVENVKESQRVI 97
Query: 724 FNIINCEKSNSQFNYGMQPLMYSVQEALNARPWWIRMGT-DICYYKNHFSRSSVAAGGQK 782
FNI+N K+ S + GM P++ S +RP W R+ ++ YY+ R +
Sbjct: 98 FNIVNFSKTKSLYRDGMAPMVKST-----SRPKWQRLPPKNVYYYRCPDHRKN------- 145
Query: 783 GKSYYTITFTVNFPHKDDVCYFAYHYPYTYSTLQMHLQKLESAHNPQQIYFRKDVLCETL 842
Y ++F F ++D+ FAY YPYTY+ Q +L L+ + YF ++ L +++
Sbjct: 146 ----YVMSFAFCFDREEDIYQFAYCYPYTYTRFQHYLDSLQKRNMD---YFFREQLGQSV 198
Query: 843 SGNSCPLVTITAMPESNYYEHICHFRNRPYVFLSARVHPGETNASWVMKGTLEYLMSNNP 902
L+TIT+ +++ + VF++ RVHPGET +S+V +G +++L+S +P
Sbjct: 199 QQRKLDLLTITSP------DNLREGAEQKVVFITGRVHPGETPSSFVCQGIIDFLVSQHP 252
Query: 903 TAQSLRESYIFKIVPMLNPDGVINGNHRCSLSGEDLNRQWQSPSPDLHPTIYHAKGLLQY 962
A LRE +FKI PMLNPDGV GN+RCSL G DLNR W PSP +HPT++ K L+
Sbjct: 253 IACVLREYLVFKIAPMLNPDGVYLGNYRCSLMGFDLNRHWLDPSPWVHPTLHGVKQLIVQ 312
Query: 963 LAAVKRLPL-VYCDYHGHSRKKNVFMYGCSIKETVWHTNDNATSCDVVEDTGYRTLPKIL 1021
+ + L Y D H HS N FMYG + D PK+L
Sbjct: 313 MYNDPKTSLEFYIDIHAHSTMMNGFMYGNIFE-------------DEERFQRQAIFPKLL 359
Query: 1022 SHIAPAFCMSSCSFVVEKSKESTAR 1046
A F SS SF + K T R
Sbjct: 360 CQNAEDFSYSSTSFNRDAVKAGTGR 384
>gi|118421091 ATP/GTP binding protein-like 5 isoform 1 [Homo
sapiens]
Length = 886
Score = 148 bits (373), Expect = 3e-35
Identities = 107/354 (30%), Positives = 166/354 (46%), Gaps = 73/354 (20%)
Query: 670 LKFNSKFESGNLRKVIQIRKNEYD--------LILNSDINS------------------- 702
L F+S+F+SGNL V ++ D L S I S
Sbjct: 8 LLFSSRFDSGNLAHVEKVESLSSDGEGVGGGASALTSGIASSPDYEFNVWTRPDCAETEF 67
Query: 703 -NHYHQWFYFEVSGMRPGVAYRFNIINCEKSNSQFNYGMQPLMYSVQEALNARPWWIRMG 761
N WFYF V G PG + NI+N K + ++ GM P + L RP W R+
Sbjct: 68 ENGNRSWFYFSVRGGMPGKLIKINIMNMNKQSKLYSQGMAPFV----RTLPTRPRWERIR 123
Query: 762 TDICYYKNHFSRSSVAAGGQKGKSYYTITFTVNFPH-KDDVCYFAYHYPYTYSTLQMHLQ 820
+ + ++ + ++F F + +FA+ YP++YS Q L
Sbjct: 124 DRPTF--------------EMTETQFVLSFVHRFVEGRGATTFFAFCYPFSYSDCQELLN 169
Query: 821 KLESA---HNPQQ------IYFRKDVLCETLSGNSCPLVTITA---------------MP 856
+L+ ++P IY+ +++LC +L G L+TIT+ P
Sbjct: 170 QLDQRFPENHPTHSSPLDTIYYHRELLCYSLDGLRVDLLTITSCHGLREDREPRLEQLFP 229
Query: 857 ESNYYEHICHFRNRPYVFLSARVHPGETNASWVMKGTLEYLMS-NNPTAQSLRESYIFKI 915
+++ F + FLS+RVHPGET +S+V G L++++ ++P AQ+LR ++FK+
Sbjct: 230 DTSTPRPF-RFAGKRIFFLSSRVHPGETPSSFVFNGFLDFILRPDDPRAQTLRRLFVFKL 288
Query: 916 VPMLNPDGVINGNHRCSLSGEDLNRQWQSPSPDLHPTIYHAKGLLQYLAAVKRL 969
+PMLNPDGV+ G++R G +LNRQ+ P LHP IY AK +L Y RL
Sbjct: 289 IPMLNPDGVVRGHYRTDSRGVNLNRQYLKPDAVLHPAIYGAKAVLLYHHVHSRL 342
Score = 46.6 bits (109), Expect = 1e-04
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 26/110 (23%)
Query: 973 YCDYHGHSRKKNVFMYGCSIKETVWHTNDNATSCDVVEDTGYRTLPKILSHIAPAFCMSS 1032
Y D HGH+ K+ FMYG S +D +T VE+ Y PK++S + F
Sbjct: 430 YVDLHGHASKRGCFMYGNSF-------SDESTQ---VENMLY---PKLISLNSAHFDFQG 476
Query: 1033 CSFVVE----------KSKESTARVVVWREIGVQRSYTMESTLCGCDQGK 1072
C+F + +SKE + RV +++ G+ SYT+E C + G+
Sbjct: 477 CNFSEKNMYARDRRDGQSKEGSGRVAIYKASGIIHSYTLE---CNYNTGR 523
>gi|78482633 ATP/GTP binding protein-like 5 isoform 3 [Homo sapiens]
Length = 717
Score = 148 bits (373), Expect = 3e-35
Identities = 107/354 (30%), Positives = 166/354 (46%), Gaps = 73/354 (20%)
Query: 670 LKFNSKFESGNLRKVIQIRKNEYD--------LILNSDINS------------------- 702
L F+S+F+SGNL V ++ D L S I S
Sbjct: 8 LLFSSRFDSGNLAHVEKVESLSSDGEGVGGGASALTSGIASSPDYEFNVWTRPDCAETEF 67
Query: 703 -NHYHQWFYFEVSGMRPGVAYRFNIINCEKSNSQFNYGMQPLMYSVQEALNARPWWIRMG 761
N WFYF V G PG + NI+N K + ++ GM P + L RP W R+
Sbjct: 68 ENGNRSWFYFSVRGGMPGKLIKINIMNMNKQSKLYSQGMAPFV----RTLPTRPRWERIR 123
Query: 762 TDICYYKNHFSRSSVAAGGQKGKSYYTITFTVNFPH-KDDVCYFAYHYPYTYSTLQMHLQ 820
+ + ++ + ++F F + +FA+ YP++YS Q L
Sbjct: 124 DRPTF--------------EMTETQFVLSFVHRFVEGRGATTFFAFCYPFSYSDCQELLN 169
Query: 821 KLESA---HNPQQ------IYFRKDVLCETLSGNSCPLVTITA---------------MP 856
+L+ ++P IY+ +++LC +L G L+TIT+ P
Sbjct: 170 QLDQRFPENHPTHSSPLDTIYYHRELLCYSLDGLRVDLLTITSCHGLREDREPRLEQLFP 229
Query: 857 ESNYYEHICHFRNRPYVFLSARVHPGETNASWVMKGTLEYLMS-NNPTAQSLRESYIFKI 915
+++ F + FLS+RVHPGET +S+V G L++++ ++P AQ+LR ++FK+
Sbjct: 230 DTSTPRPF-RFAGKRIFFLSSRVHPGETPSSFVFNGFLDFILRPDDPRAQTLRRLFVFKL 288
Query: 916 VPMLNPDGVINGNHRCSLSGEDLNRQWQSPSPDLHPTIYHAKGLLQYLAAVKRL 969
+PMLNPDGV+ G++R G +LNRQ+ P LHP IY AK +L Y RL
Sbjct: 289 IPMLNPDGVVRGHYRTDSRGVNLNRQYLKPDAVLHPAIYGAKAVLLYHHVHSRL 342
Score = 46.6 bits (109), Expect = 1e-04
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 26/110 (23%)
Query: 973 YCDYHGHSRKKNVFMYGCSIKETVWHTNDNATSCDVVEDTGYRTLPKILSHIAPAFCMSS 1032
Y D HGH+ K+ FMYG S +D +T VE+ Y PK++S + F
Sbjct: 430 YVDLHGHASKRGCFMYGNSF-------SDESTQ---VENMLY---PKLISLNSAHFDFQG 476
Query: 1033 CSFVVE----------KSKESTARVVVWREIGVQRSYTMESTLCGCDQGK 1072
C+F + +SKE + RV +++ G+ SYT+E C + G+
Sbjct: 477 CNFSEKNMYARDRRDGQSKEGSGRVAIYKASGIIHSYTLE---CNYNTGR 523
>gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens]
Length = 619
Score = 37.4 bits (85), Expect = 0.086
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 324 DDVVDESDDNDDIDVEAENETENEDDLDQNFKNDDIETDINKLKPQQEPGRTIEDLKMYE 383
DD DE DD+++ + E E E E++DD ++F + + D + Q P +T + E
Sbjct: 141 DDDDDEDDDDEEDEEEEEEEEEDDDDDTEDFADQENLPDPQDISCHQSPSKTDH---LTE 197
Query: 384 HLFPELVDDFQD 395
+ + DF D
Sbjct: 198 KAYSDTPRDFPD 209
>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
sapiens]
Length = 2168
Score = 36.2 bits (82), Expect = 0.19
Identities = 46/173 (26%), Positives = 71/173 (41%), Gaps = 31/173 (17%)
Query: 324 DDVVDESDDNDDIDVEAENE-----------TENEDDLDQNFKNDDIETDINKLKPQQEP 372
DD D+SDD D D E E + E+ED+ DQ +++E I KL QQ
Sbjct: 1301 DDDDDDSDDQGDEDDEDEEDKEDKKGKKTDICEDEDEGDQAASVEELEKQIEKLSKQQSQ 1360
Query: 373 GRTIEDLKMYE--HLFPELV---DDFQDYDLISKEPKPFVFEGKVRGPIVVPTAGEETSG 427
R K+++ H ++ D ++ I + EG G + EE +
Sbjct: 1361 YRR----KLFDASHSLRSVMFGQDRYRRRYWILPQCGGIFVEGMESGEGL-----EEIAK 1411
Query: 428 NSGNLRKV----VMKENISSKGDEGEKKSTFMDLAKEDIKDNDRT--LQQQPG 474
L+K + +E + GD +T KED+K+ D T Q+PG
Sbjct: 1412 EREKLKKAESVQIKEEMFETSGDSLNCSNTDHCEQKEDLKEKDNTNLFLQKPG 1464
Score = 31.2 bits (69), Expect = 6.1
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 322 EVDDVVDESDDNDD--IDVEAENETENEDDLDQNFKNDDIETDINKLKPQQEPGRT 375
E D+ DE DD DD D ++E+++ +E D + + + DD + D ++ E +T
Sbjct: 613 EDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSEEEDDDDKDQDESDSDTEGEKT 668
Score = 31.2 bits (69), Expect = 6.1
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 9/55 (16%)
Query: 322 EVDDVVDESDDNDDIDVEAE---------NETENEDDLDQNFKNDDIETDINKLK 367
E D+ DE D++DD E++ +E E++DD DQ+ + D E + +K
Sbjct: 617 EEDEEDDEDDESDDSQSESDSNSESDTEGSEEEDDDDKDQDESDSDTEGEKTSMK 671
>gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo
sapiens]
Length = 1272
Score = 35.4 bits (80), Expect = 0.33
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Query: 423 EETSGNSGNLRKVVMKENISSKGDEGEKKST-----FMDLAKEDIKDNDRTLQQQPGDQN 477
EE SGN + + +E + DEGE++ D KE+ D + T G
Sbjct: 1043 EEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLTDSNKENETDEENTEVMIKGGGL 1102
Query: 478 RTISSVHGLNNDIVKALDRITLQNIPSQTAPGFTAEMKKDCSLPL 522
+ + V + D ++ALD++ L+N+ ++ + D ++PL
Sbjct: 1103 KHVPCVE--DEDFIQALDKMMLENLQQRSGESVKVH-QLDVAIPL 1144
>gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo
sapiens]
Length = 1272
Score = 35.4 bits (80), Expect = 0.33
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Query: 423 EETSGNSGNLRKVVMKENISSKGDEGEKKST-----FMDLAKEDIKDNDRTLQQQPGDQN 477
EE SGN + + +E + DEGE++ D KE+ D + T G
Sbjct: 1043 EEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLTDSNKENETDEENTEVMIKGGGL 1102
Query: 478 RTISSVHGLNNDIVKALDRITLQNIPSQTAPGFTAEMKKDCSLPL 522
+ + V + D ++ALD++ L+N+ ++ + D ++PL
Sbjct: 1103 KHVPCVE--DEDFIQALDKMMLENLQQRSGESVKVH-QLDVAIPL 1144
>gi|193083197 ubiquitin-like domain containing CTD phosphatase 1
[Homo sapiens]
Length = 318
Score = 35.0 bits (79), Expect = 0.42
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 25/149 (16%)
Query: 271 GILQSLKSVTNIKL-GRKAFIDAN--GMKILYNTSQLPVIPVTGPVAQLYSLPPEVDDVV 327
G+L + + +K+ G+ A D +K+ NT + + + + PP+ DDVV
Sbjct: 37 GVLPERQKLLGLKVKGKPAENDVKLGALKLKPNTKIMMMGTREESLEDVLGPPPDNDDVV 96
Query: 328 DESDDNDDIDVEAENETENEDDLDQNFKNDDIETDINKLKPQQEPGRTI---EDLKMYEH 384
++ D D++ VE EN EN + + K +E L P +E + + D +++H
Sbjct: 97 NDFDIEDEV-VEVENREENLLKISRRVKEYKVEI----LNPPREGKKLLVLDVDYTLFDH 151
Query: 385 --------------LFPELVDDFQDYDLI 399
L L ++DYD++
Sbjct: 152 RSCAETGVELMRPYLHEFLTSAYEDYDIV 180
>gi|156071452 nardilysin isoform b [Homo sapiens]
Length = 1151
Score = 33.9 bits (76), Expect = 0.95
Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 322 EVDDVVDESDDNDDIDVEAENETENEDDLDQNFK-----NDDIETDINKLKPQQE 371
E ++ V+E +++DD D AE E ++E+ D + +DD++T+ N+L+ +E
Sbjct: 144 EEEEEVEEEEEDDDEDSGAEIEDDDEEGFDDEDEFDDEHDDDLDTEDNELEELEE 198
>gi|156071450 nardilysin isoform a [Homo sapiens]
Length = 1219
Score = 33.9 bits (76), Expect = 0.95
Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 322 EVDDVVDESDDNDDIDVEAENETENEDDLDQNFK-----NDDIETDINKLKPQQE 371
E ++ V+E +++DD D AE E ++E+ D + +DD++T+ N+L+ +E
Sbjct: 144 EEEEEVEEEEEDDDEDSGAEIEDDDEEGFDDEDEFDDEHDDDLDTEDNELEELEE 198
>gi|42542392 CCAAT/enhancer binding protein zeta [Homo sapiens]
Length = 1054
Score = 33.5 bits (75), Expect = 1.2
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Query: 321 PEVDDVVDESDDNDDIDVEAENETENEDDLDQNFKNDDI--ETDINKLKPQQEPGRTIED 378
PE DD + D NDD D+E + + E ++ + + ++ ETD+ KP+ ++
Sbjct: 627 PESDDEENFIDANDDEDMEKFTDADKETEIVKKLETEETVPETDVETKKPEVASWVHFDN 686
Query: 379 LKMYEHLFPELVDDFQDYDLISKEP 403
LK + L YD S+ P
Sbjct: 687 LKGGKQL--------NKYDPFSRNP 703
>gi|62526045 zinc finger protein 638 [Homo sapiens]
Length = 1978
Score = 33.1 bits (74), Expect = 1.6
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 323 VDDVVDESDDNDDIDVE-AENETENEDDLDQNFKNDDIETDINKLKPQQEPGRTIEDLKM 381
VD+V +E D ++D+ VE A+++ ++ D N K ++T KL+ + G +
Sbjct: 1777 VDEVGEEEDGDNDLKVELAQSKNDHPTDKKGNRKKRAVDTKKTKLESLSQVG------PV 1830
Query: 382 YEHLFPELVDDFQDYDLISKEPKPFVFEGKV----RGPIVVPTAGEE 424
E++ E + + L +K P V GK + + P GEE
Sbjct: 1831 NENVMEEDLKTMIERHLTAKTPTKRVRIGKTLPSEKAVVTEPAKGEE 1877
>gi|21626468 zinc finger protein 638 [Homo sapiens]
Length = 1978
Score = 33.1 bits (74), Expect = 1.6
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 323 VDDVVDESDDNDDIDVE-AENETENEDDLDQNFKNDDIETDINKLKPQQEPGRTIEDLKM 381
VD+V +E D ++D+ VE A+++ ++ D N K ++T KL+ + G +
Sbjct: 1777 VDEVGEEEDGDNDLKVELAQSKNDHPTDKKGNRKKRAVDTKKTKLESLSQVG------PV 1830
Query: 382 YEHLFPELVDDFQDYDLISKEPKPFVFEGKV----RGPIVVPTAGEE 424
E++ E + + L +K P V GK + + P GEE
Sbjct: 1831 NENVMEEDLKTMIERHLTAKTPTKRVRIGKTLPSEKAVVTEPAKGEE 1877
>gi|38569484 kinesin family member 21A [Homo sapiens]
Length = 1661
Score = 32.7 bits (73), Expect = 2.1
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 327 VDESDDNDDIDVEAENETENEDDLDQNFKNDDIETDIN-KLKPQQEPGRTIEDLKMYEHL 385
V+ES + D + E E E E EDD+D +D+ +++ + K Q + ++ + + L
Sbjct: 588 VEESQEVSDHEDEEEEEEEEEDDIDGGESSDESDSESDEKANYQADLANITCEIAIKQKL 647
Query: 386 FPELVDDFQDYDLISK--EPKPFVFEGKVR 413
EL + + + K E K + + K+R
Sbjct: 648 IDELENSQKRLQTLKKQYEEKLMMLQHKIR 677
>gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]
Length = 1312
Score = 32.7 bits (73), Expect = 2.1
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 322 EVDDVVDESDDNDDIDVEAENETENEDDLDQNFKNDDIETDINKLKPQQEPGRTIEDLKM 381
E + DE D+ + + E E E E+EDD D N + ++ E +K Q GR ++ KM
Sbjct: 530 ETNKEEDEDDEEAEEEEEEEEEEEDEDD-DDNNEEEEFECYPPGMKVQVRYGRG-KNQKM 587
Query: 382 YE 383
YE
Sbjct: 588 YE 589
>gi|239743493 PREDICTED: hypothetical protein XP_002342862 [Homo
sapiens]
Length = 169
Score = 32.3 bits (72), Expect = 2.8
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 73 TLENTKDLQTTLNILSILVELVSAGGGRRVSFLVTKGGSQ 112
+LENT+ QT N+L + +VSA G R SF ++GG++
Sbjct: 30 SLENTRVTQTPENMLLADLMIVSAVGNRAASFHYSRGGAK 69
>gi|93141047 collagen, type XII, alpha 1 long isoform precursor
[Homo sapiens]
Length = 3063
Score = 32.3 bits (72), Expect = 2.8
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 306 VIPVTGPVAQLYSLPPE---VDDVVDESDDNDDIDVEAENETENEDDLDQNFKNDDIETD 362
V P + L SL PE + +V E +D I + E TE +N K D TD
Sbjct: 678 VEPASSTSVVLSSLKPETLYLVNVTAEYEDGFSIPLAGEETTEEVKGAPRNLKVTDETTD 737
Query: 363 INKLKPQQEPGRTI 376
K+ Q PGR +
Sbjct: 738 SFKITWTQAPGRVL 751
>gi|222446616 hypothetical protein LOC341346 [Homo sapiens]
Length = 343
Score = 32.0 bits (71), Expect = 3.6
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 14/55 (25%)
Query: 322 EVDDVVDESDDNDDIDVE-----------AENETENEDDLDQNFKNDDIETDINK 365
+VD ++D SDD DDI E E E E++ DL K D ETD+++
Sbjct: 52 KVDHILDRSDDEDDISSENPQTDFLHKGMLELEAEHDQDLS---KQDKQETDVDE 103
>gi|239752832 PREDICTED: similar to SET translocation [Homo sapiens]
Length = 302
Score = 32.0 bits (71), Expect = 3.6
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 317 YSLPPEVDDVVDESDDNDDID--VEAENETENEDDLDQNFKNDDIETD 362
Y L P++DD DD+DD D E E E E+ D+ D++ +D + D
Sbjct: 242 YYLVPDMDDEEGGEDDDDDDDDGDEGEEELEDIDEGDEDEGEEDEDDD 289
>gi|239747380 PREDICTED: similar to SET translocation [Homo sapiens]
Length = 302
Score = 32.0 bits (71), Expect = 3.6
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 317 YSLPPEVDDVVDESDDNDDID--VEAENETENEDDLDQNFKNDDIETD 362
Y L P++DD DD+DD D E E E E+ D+ D++ +D + D
Sbjct: 242 YYLVPDMDDEEGGEDDDDDDDDGDEGEEELEDIDEGDEDEGEEDEDDD 289
>gi|239741205 PREDICTED: similar to SET translocation [Homo sapiens]
Length = 302
Score = 32.0 bits (71), Expect = 3.6
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 317 YSLPPEVDDVVDESDDNDDID--VEAENETENEDDLDQNFKNDDIETD 362
Y L P++DD DD+DD D E E E E+ D+ D++ +D + D
Sbjct: 242 YYLVPDMDDEEGGEDDDDDDDDGDEGEEELEDIDEGDEDEGEEDEDDD 289
>gi|61743916 carboxypeptidase A4 preproprotein [Homo sapiens]
Length = 421
Score = 32.0 bits (71), Expect = 3.6
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 16/91 (17%)
Query: 870 RPYVFLSARVHPGETNASWVMKGTLEYLMSN---NPTAQSLRESYIFKIVPMLNPDGVI- 925
RP V+L+A +H E + T ++S+ +P S+ E ++P+ NPDG +
Sbjct: 171 RPAVWLNAGIHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVY 230
Query: 926 ------------NGNHRCSLSGEDLNRQWQS 944
+ N S G D NR W +
Sbjct: 231 TQTQNRLWRKTRSRNPGSSCIGADPNRNWNA 261
>gi|51873049 hypothetical protein LOC8603 [Homo sapiens]
Length = 1224
Score = 32.0 bits (71), Expect = 3.6
Identities = 31/133 (23%), Positives = 44/133 (33%), Gaps = 25/133 (18%)
Query: 506 TAPGFTAEMKKDCSLPLTVLTCAKACPHMATCGNVLFEGRTVQLG---KLCCTGVETEDD 562
T PGF K C PL T + C + EG + G G E+ D+
Sbjct: 708 TTPGFVDTRKSFCPAPLPPATDGSISAPPSVCSDPDCEGHRCENGVYDPQQDDGDESADE 767
Query: 563 EDTESNSSVEQASVEVPDGPTLHDPDLYIEIVKNTKSVPEYSEVAYPDYFGHIPPPFKEP 622
+ +SS S +G +Y + Y ++FGH PP
Sbjct: 768 DSCSEHSSSTSTSTNQKEG--------------------KYCDCCYCEFFGHGGPPAAP- 806
Query: 623 ILERPYGVQRTKI 635
R Y R K+
Sbjct: 807 -TSRNYAEMREKL 818
>gi|120431745 huntingtin-associated protein 1 isoform 4 [Homo
sapiens]
Length = 594
Score = 32.0 bits (71), Expect = 3.6
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 324 DDVVDESDDNDDIDVEAENETENEDDLDQNFKNDDIETDINKLKPQQEPGRTIEDLKMYE 383
D+++ D+D+ D E E E E E + ++ + ++ E D+ P P ++ +++
Sbjct: 250 DELLQLYSDSDEED-EDEEEEEEEKEAEEEQEEEEAEEDLQCAHPCDAPKLISQEALLHQ 308
Query: 384 HLFPEL 389
H P+L
Sbjct: 309 HHCPQL 314
>gi|120431743 huntingtin-associated protein 1 isoform 3 [Homo
sapiens]
Length = 602
Score = 32.0 bits (71), Expect = 3.6
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 324 DDVVDESDDNDDIDVEAENETENEDDLDQNFKNDDIETDINKLKPQQEPGRTIEDLKMYE 383
D+++ D+D+ D E E E E E + ++ + ++ E D+ P P ++ +++
Sbjct: 258 DELLQLYSDSDEED-EDEEEEEEEKEAEEEQEEEEAEEDLQCAHPCDAPKLISQEALLHQ 316
Query: 384 HLFPEL 389
H P+L
Sbjct: 317 HHCPQL 322
>gi|120431738 huntingtin-associated protein 1 isoform 2 [Homo
sapiens]
Length = 619
Score = 32.0 bits (71), Expect = 3.6
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 324 DDVVDESDDNDDIDVEAENETENEDDLDQNFKNDDIETDINKLKPQQEPGRTIEDLKMYE 383
D+++ D+D+ D E E E E E + ++ + ++ E D+ P P ++ +++
Sbjct: 250 DELLQLYSDSDEED-EDEEEEEEEKEAEEEQEEEEAEEDLQCAHPCDAPKLISQEALLHQ 308
Query: 384 HLFPEL 389
H P+L
Sbjct: 309 HHCPQL 314
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,126,246
Number of Sequences: 37866
Number of extensions: 2081837
Number of successful extensions: 7600
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 7267
Number of HSP's gapped (non-prelim): 286
length of query: 1186
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1073
effective length of database: 13,968,660
effective search space: 14988372180
effective search space used: 14988372180
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.