HCCS 9378

Name: HCCS	Sequence: fasta or formatted (268aa)		NCBI GI: 169790851
Description: holocytochrome c synthase		Referenced in: Heme Oxidative Phosphorylation
Other entries for this name: alt mRNA [268aa] holocytochrome c synthase
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 23 2 C cysteine 2.6 7 1 D aspartate 5.2 14 1 E glutamate 7.8 21 2 F phenylalanine 1.9 5 1 G glycine 5.2 14 2 H histidine 1.9 5 1 I isoleucine 4.9 13 2 K lysine 6.7 18 2 L leucine 4.5 12 1 M methionine 3.4 9 1 N asparagine 4.9 13 2 P proline 9.0 24 3 Q glutamine 3.4 9 1 R arginine 5.6 15 1 S serine 7.8 21 2 T threonine 3.4 9 1 V valine 4.9 13 1 W tryptophan 4.5 12 2 Y tyrosine 4.1 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 holocytochrome c synthase HCCS 1.000 holocytochrome c synthase FAM71E2 0.029 hypothetical protein LOC284418 UBAP1 0.022 ubiquitin associated protein 1 MUC7 0.018 mucin 7, secreted precursor MUC7 0.018 mucin 7, secreted precursor MUC7 0.018 mucin 7, secreted precursor KIAA0754 0.016 hypothetical protein LOC643314 AFF4 0.014 ALL1 fused gene from 5q31 PRKCSH 0.014 protein kinase C substrate 80K-H isoform 1 DNAH1 0.014 dynein, axonemal, heavy chain 1 LOC100290436 0.013 PREDICTED: hypothetical protein XP_002347616 LOC100287267 0.013 PREDICTED: hypothetical protein XP_002343446 C4orf40 0.013 hypothetical protein LOC401137 RAPH1 0.011 Ras association and pleckstrin homology domains 1 is... GALNT7 0.011 polypeptide N-acetylgalactosaminyltransferase 7 [Ho... SAMD1 0.011 sterile alpha motif domain containing 1 NACA 0.011 nascent polypeptide-associated complex alpha subuni... WNK2 0.009 WNK lysine deficient protein kinase 2 BAT2D1 0.009 HBxAg transactivated protein 2 CCDC88C 0.009 DVL-binding protein DAPLE LOC100291632 0.009 PREDICTED: hypothetical protein XP_002344527 LOC100130882 0.009 PREDICTED: hypothetical protein LOC100288471 0.009 PREDICTED: hypothetical protein LOC100130882 0.009 PREDICTED: hypothetical protein LOC100288471 0.009 PREDICTED: hypothetical protein XP_002343034 LOC100130882 0.009 PREDICTED: hypothetical protein IRX1 0.009 iroquois homeobox protein 1 ABI1 0.009 abl-interactor 1 isoform d ABI1 0.009 abl-interactor 1 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.