UBAP1 36511

Name: UBAP1	Sequence: fasta or formatted (502aa)		NCBI GI: 8394499
Description: ubiquitin associated protein 1		Referenced in: Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 31 1 C cysteine 2.2 11 1 D aspartate 5.0 25 2 E glutamate 9.0 45 2 F phenylalanine 4.2 21 1 G glycine 5.0 25 2 H histidine 2.2 11 2 I isoleucine 3.6 18 1 K lysine 7.6 38 3 L leucine 11.4 57 3 M methionine 3.4 17 2 N asparagine 4.8 24 2 P proline 7.0 35 3 Q glutamine 4.0 20 1 R arginine 2.0 10 1 S serine 11.0 55 3 T threonine 5.6 28 2 V valine 4.8 24 2 W tryptophan 0.2 1 1 Y tyrosine 1.2 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin associated protein 1 LOC100293156 0.069 PREDICTED: similar to rCG58239 LOC100287308 0.069 PREDICTED: similar to rCG58239 LOC100287308 0.069 PREDICTED: hypothetical protein XP_002343390 USP5 0.015 ubiquitin specific peptidase 5 isoform 2 USP5 0.015 ubiquitin specific peptidase 5 isoform 1 LOC100131251 0.012 PREDICTED: hypothetical protein LOC100131251 0.012 PREDICTED: hypothetical protein HCCS 0.012 holocytochrome c synthase HCCS 0.012 holocytochrome c synthase LOC100128719 0.010 PREDICTED: hypothetical protein, partial LOC100128719 0.010 PREDICTED: hypothetical protein, partial LOC100291878 0.009 PREDICTED: similar to RIKEN cDNA C230030N03 NEIL3 0.009 nei endonuclease VIII-like 3 ACACA 0.008 acetyl-Coenzyme A carboxylase alpha isoform 2 ACACA 0.008 acetyl-Coenzyme A carboxylase alpha isoform 4 ACACA 0.008 acetyl-Coenzyme A carboxylase alpha isoform 3 ACACA 0.008 acetyl-Coenzyme A carboxylase alpha isoform 2 ACACA 0.008 acetyl-Coenzyme A carboxylase alpha isoform 1 RAD23A 0.008 UV excision repair protein RAD23 homolog A MYOCD 0.008 myocardin isoform 2 CYTSB 0.008 spectrin domain with coiled-coils 1 NSP5a3b CYTSB 0.008 spectrin domain with coiled-coils 1 NSP5a3a CYTSB 0.008 spectrin domain with coiled-coils 1 NSP5b3b CYTSB 0.008 spectrin domain with coiled-coils 1 NSP5b3a BEST3 0.008 vitelliform macular dystrophy 2-like 3 isoform 2 [H... BEST3 0.008 vitelliform macular dystrophy 2-like 3 isoform 1 [H... DLEC1 0.007 deleted in lung and esophageal cancer 1 isoform DLEC... DLEC1 0.007 deleted in lung and esophageal cancer 1 isoform DLEC... BAZ2B 0.007 bromodomain adjacent to zinc finger domain, 2B [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.