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Search of human proteins with 169213640
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169213640 PREDICTED: hypothetical protein [Homo sapiens]
(160 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169213640 PREDICTED: hypothetical protein [Homo sapiens] 355 7e-99
gi|46249382 paired-like homeobox 2a [Homo sapiens] 38 0.003
gi|164565408 common-site lymphoma/leukemia guanine nucleotide ex... 37 0.006
gi|13128980 proline rich 14 [Homo sapiens] 37 0.006
gi|197276661 paired box 1 [Homo sapiens] 36 0.012
gi|24497460 Shaw-related voltage-gated potassium channel protein... 36 0.012
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 36 0.016
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 36 0.016
gi|194578898 hypothetical protein LOC100170841 [Homo sapiens] 36 0.016
gi|156416026 zinc finger protein 219 [Homo sapiens] 35 0.021
gi|156415998 zinc finger protein 219 [Homo sapiens] 35 0.021
gi|156415996 zinc finger protein 219 [Homo sapiens] 35 0.021
gi|116256460 zinc finger protein 775 [Homo sapiens] 35 0.027
gi|32483397 dopamine receptor D4 [Homo sapiens] 35 0.036
gi|239748716 PREDICTED: hypothetical protein XP_002346782 [Homo ... 35 0.036
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 34 0.047
gi|169208912 PREDICTED: hypothetical protein [Homo sapiens] 34 0.047
gi|169208667 PREDICTED: hypothetical protein [Homo sapiens] 34 0.047
gi|169207782 PREDICTED: hypothetical protein [Homo sapiens] 34 0.047
gi|169208084 PREDICTED: hypothetical protein [Homo sapiens] 34 0.047
gi|169207076 PREDICTED: hypothetical protein [Homo sapiens] 34 0.047
gi|13994190 frizzled 8 [Homo sapiens] 34 0.047
gi|156938257 leucine rich repeat containing 16B [Homo sapiens] 34 0.047
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 34 0.047
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 34 0.047
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 34 0.047
gi|169210256 PREDICTED: hypothetical protein [Homo sapiens] 34 0.061
gi|239755304 PREDICTED: hypothetical protein XP_002344521 [Homo ... 34 0.061
gi|239749797 PREDICTED: hypothetical protein XP_002347167 [Homo ... 34 0.061
gi|239744069 PREDICTED: hypothetical protein XP_002344285 [Homo ... 34 0.061
>gi|169213640 PREDICTED: hypothetical protein [Homo sapiens]
Length = 160
Score = 355 bits (912), Expect = 7e-99
Identities = 160/160 (100%), Positives = 160/160 (100%)
Query: 1 MGHRAALWASLSKTLRRHSRNGQTGLYPKSQRRQCRRKTGQESRLLPADLCQDLLCSDCG 60
MGHRAALWASLSKTLRRHSRNGQTGLYPKSQRRQCRRKTGQESRLLPADLCQDLLCSDCG
Sbjct: 1 MGHRAALWASLSKTLRRHSRNGQTGLYPKSQRRQCRRKTGQESRLLPADLCQDLLCSDCG 60
Query: 61 SGCSLRAHPRQGTLAWPRSPPEPGKLGSPRAKPDPWEGASRAEPGPGVAARPCSPRGGNW 120
SGCSLRAHPRQGTLAWPRSPPEPGKLGSPRAKPDPWEGASRAEPGPGVAARPCSPRGGNW
Sbjct: 61 SGCSLRAHPRQGTLAWPRSPPEPGKLGSPRAKPDPWEGASRAEPGPGVAARPCSPRGGNW 120
Query: 121 MAAGCGGGRHTCSEGDCGLQDLSPPCPRPRPGHVHGFLDP 160
MAAGCGGGRHTCSEGDCGLQDLSPPCPRPRPGHVHGFLDP
Sbjct: 121 MAAGCGGGRHTCSEGDCGLQDLSPPCPRPRPGHVHGFLDP 160
>gi|46249382 paired-like homeobox 2a [Homo sapiens]
Length = 284
Score = 38.1 bits (87), Expect = 0.003
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 80 PPEPGKLGSPRAKPDPWEGASRAEPGPGVAARPCSPRGGNWMAAGCGGG 128
PP PG L SPR P P A + PGPG +P +G W GGG
Sbjct: 195 PPAPG-LASPRLSPSPLPVALGSGPGPGPGPQPL--KGALWAGVAGGGG 240
>gi|164565408 common-site lymphoma/leukemia guanine nucleotide
exchange factor [Homo sapiens]
Length = 1386
Score = 37.4 bits (85), Expect = 0.006
Identities = 24/60 (40%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Query: 58 DCGSGCSLRAHPRQGTLAWPR------SPPEPGKLGSPRAKPDPWEGASRAEPGPGVAAR 111
DCG+ C R P T+A PR S G G P P P ASR EP PG R
Sbjct: 27 DCGTVCETRTAPAAPTMASPRGSGSSTSLSTVGSEGDPAPGPTPACSASRPEPLPGPPIR 86
Score = 28.5 bits (62), Expect = 2.6
Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 3/77 (3%)
Query: 80 PPEPGKLGS--PRAKPDPWEGASRAEPGPG-VAARPCSPRGGNWMAAGCGGGRHTCSEGD 136
P + G L S P P +G SR GP V ++P P + + G T
Sbjct: 1039 PKQEGHLDSESPTNIPLTKQGGSRDVQGPDPVCSQPIQPLSWHGSSLDPQGPGDTLPPLP 1098
Query: 137 CGLQDLSPPCPRPRPGH 153
C L DL P P P H
Sbjct: 1099 CHLPDLQIPGTSPLPAH 1115
>gi|13128980 proline rich 14 [Homo sapiens]
Length = 585
Score = 37.4 bits (85), Expect = 0.006
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 17/107 (15%)
Query: 10 SLSKTLRRHSRNGQTGLYPKSQRRQCRRKTGQESRLLPA-DLCQDLLCSDCGSGCSLRAH 68
++S+ + + G + P+ RQ R + LLP L + C D G
Sbjct: 287 AISEAEQSGAAEGTASVSPRPPIRQWRTQDHNTPALLPKPSLGRSYSCPDLGP------- 339
Query: 69 PRQGTLAWPRSPPEPGKLGSPRAKPDPWEGA--SRAEPGPGVAARPC 113
P GT WP +PP+P + PR + G +RA P P RPC
Sbjct: 340 PGPGTCTWPPAPPQPSR---PRPRRHTVGGGEMARAPPPP----RPC 379
>gi|197276661 paired box 1 [Homo sapiens]
Length = 534
Score = 36.2 bits (82), Expect = 0.012
Identities = 31/76 (40%), Positives = 33/76 (43%), Gaps = 10/76 (13%)
Query: 86 LGSPRAKPDPWEGASRAEPGPGV--------AARPCSPRGGNWMAAGCGGGRHTCSEGDC 137
LGS RA WEGA+ A GPG A R SPR G + G S G
Sbjct: 7 LGS-RAWRVSWEGAAAAAAGPGAGGSALRCRAQRVSSPRLGRRGSRLSGALPLCLSRGGG 65
Query: 138 GLQDLSPPCPRPRPGH 153
G Q L P C P PGH
Sbjct: 66 GAQAL-PDCAGPSPGH 80
>gi|24497460 Shaw-related voltage-gated potassium channel protein 3
[Homo sapiens]
Length = 757
Score = 36.2 bits (82), Expect = 0.012
Identities = 32/87 (36%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 61 SGCSLRAHPRQG-TLAWPRSPPEPGKLGSPRAKPDPWEGASRAEPGPGVA-ARPCSPRG- 117
S C RQG + P PP+P + SP P P + A+PGP + A P +PRG
Sbjct: 4 SVCVSSFRGRQGASKQQPAPPPQPPE--SPPPPPLPPQQQQPAQPGPAASPAGPPAPRGP 61
Query: 118 GNWMAAGCGG------GRHTCSEGDCG 138
G+ A C G GRH GD G
Sbjct: 62 GDRRAEPCPGLPAAAMGRHGGGGGDSG 88
Score = 33.9 bits (76), Expect = 0.061
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 78 RSPPEPGKLGSPRAKPDP-WEGASRAEPGPGVAARPCSPRGGNWMAAG-----CGGGRH 130
+ P +PG SP P P G RAEP PG+ A GG +G GG RH
Sbjct: 41 QQPAQPGPAASPAGPPAPRGPGDRRAEPCPGLPAAAMGRHGGGGGDSGKIVINVGGVRH 99
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 35.8 bits (81), Expect = 0.016
Identities = 29/96 (30%), Positives = 36/96 (37%), Gaps = 18/96 (18%)
Query: 60 GSGCSLRAHPRQGT--LAWP-RSPPEPGKLGSPRAKPDPWEGASRAEPGPGV---AARPC 113
GS +LR H G+ WP R PP P + P P AS PGP + ++R
Sbjct: 971 GSPPTLRVHGDTGSPRKPWPERRPPRPAATRTAPPTPSPGPSASPGPPGPALTSDSSREL 1030
Query: 114 SPRGGNWMAAGCGGGRHTCSEGDCGLQDLSPPCPRP 149
+P SE D SPP P P
Sbjct: 1031 TPHSA------------LTSEATSDAPDTSPPTPDP 1054
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 35.8 bits (81), Expect = 0.016
Identities = 29/84 (34%), Positives = 37/84 (44%), Gaps = 12/84 (14%)
Query: 71 QGTLAWPRSPPEPGKLGSPRAKPDPWEGASRAEPG-PGVAARPCSP-RGGNWMAAGCGGG 128
+G + P P PG+ G+P + P ++ E G PG RP SP R GN G G
Sbjct: 1265 RGQVGPPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPGRAGNPGTPGAPG- 1323
Query: 129 RHTCSEGDCGLQDLSPPCPRPRPG 152
+G GL P PR PG
Sbjct: 1324 ----LKGSPGL-----PGPRGDPG 1338
Score = 26.6 bits (57), Expect = 9.8
Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 5/75 (6%)
Query: 83 PGKLGSPRAKPDPWEGASRAEPGPGVAARPCSPRGGNWMAAGCGGGRHTCSEGDCGLQ-- 140
PG G+P P S EPGPG++ P G G +GD G+
Sbjct: 2078 PGLPGTPGPPGPPGPKVSVDEPGPGLSGEQ-GPPGLKGAKGEPGSNGDQGPKGDRGVPGI 2136
Query: 141 --DLSPPCPRPRPGH 153
D P PR + G+
Sbjct: 2137 KGDRGEPGPRGQDGN 2151
>gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]
Length = 379
Score = 35.8 bits (81), Expect = 0.016
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 13/66 (19%)
Query: 63 CSLRAHPRQGTLAWPRSPPEP--------GKLGSPRAK-----PDPWEGASRAEPGPGVA 109
C HPR+ T ++ +PP P G SP + P P G S GPG A
Sbjct: 140 CPAPPHPRESTTSFASAPPRPAPGLEPQRGPAASPPQEPSSRPPSPPAGLSTEPAGPGTA 199
Query: 110 ARPCSP 115
RP P
Sbjct: 200 PRPFLP 205
>gi|156416026 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 35.4 bits (80), Expect = 0.021
Identities = 34/102 (33%), Positives = 36/102 (35%), Gaps = 35/102 (34%)
Query: 66 RAHPRQGTLAWPRSPPEP------GKLGSPRAKPDP----W-EGASRAEP-----GPGVA 109
R H Q + A P PPEP G AKP P W EGAS P GPG
Sbjct: 547 RHHREQRSGAGPGPPPEPPPPSQRGSAPQSGAKPSPQPATWVEGASSPRPPSSGAGPGSR 606
Query: 110 ARPCSP-------------------RGGNWMAAGCGGGRHTC 132
+P SP R G AG GG H C
Sbjct: 607 RKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGPGGALHRC 648
Score = 28.5 bits (62), Expect = 2.6
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 77 PRSPPEPGKLGSPRAKPDPWEGASRAEPGPGVAARPCSPRGGNWMAAGCG 126
P+ PP+P P+ +P+P E A P P AA P + CG
Sbjct: 232 PQPPPQPEPRSVPQPEPEP-EPEREATPTPAPAAPEEPPAPPEFRCQVCG 280
Score = 26.9 bits (58), Expect = 7.5
Identities = 29/106 (27%), Positives = 36/106 (33%), Gaps = 12/106 (11%)
Query: 52 QDLLCSDCGSGCS----LRAHPRQGTLAWPRSPP--------EPGKLGSPRAKPDPWEGA 99
Q C CG + LR+H R PRSP E L R G
Sbjct: 83 QAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLLLELEERALLREARLGRARSSGG 142
Query: 100 SRAEPGPGVAARPCSPRGGNWMAAGCGGGRHTCSEGDCGLQDLSPP 145
+A P ARP +P + C G T +E + L L P
Sbjct: 143 MQATPATEGLARPQAPSSSAFRCPYCKGKFRTSAERERHLHILHRP 188
>gi|156415998 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 35.4 bits (80), Expect = 0.021
Identities = 34/102 (33%), Positives = 36/102 (35%), Gaps = 35/102 (34%)
Query: 66 RAHPRQGTLAWPRSPPEP------GKLGSPRAKPDP----W-EGASRAEP-----GPGVA 109
R H Q + A P PPEP G AKP P W EGAS P GPG
Sbjct: 547 RHHREQRSGAGPGPPPEPPPPSQRGSAPQSGAKPSPQPATWVEGASSPRPPSSGAGPGSR 606
Query: 110 ARPCSP-------------------RGGNWMAAGCGGGRHTC 132
+P SP R G AG GG H C
Sbjct: 607 RKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGPGGALHRC 648
Score = 28.5 bits (62), Expect = 2.6
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 77 PRSPPEPGKLGSPRAKPDPWEGASRAEPGPGVAARPCSPRGGNWMAAGCG 126
P+ PP+P P+ +P+P E A P P AA P + CG
Sbjct: 232 PQPPPQPEPRSVPQPEPEP-EPEREATPTPAPAAPEEPPAPPEFRCQVCG 280
Score = 26.9 bits (58), Expect = 7.5
Identities = 29/106 (27%), Positives = 36/106 (33%), Gaps = 12/106 (11%)
Query: 52 QDLLCSDCGSGCS----LRAHPRQGTLAWPRSPP--------EPGKLGSPRAKPDPWEGA 99
Q C CG + LR+H R PRSP E L R G
Sbjct: 83 QAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLLLELEERALLREARLGRARSSGG 142
Query: 100 SRAEPGPGVAARPCSPRGGNWMAAGCGGGRHTCSEGDCGLQDLSPP 145
+A P ARP +P + C G T +E + L L P
Sbjct: 143 MQATPATEGLARPQAPSSSAFRCPYCKGKFRTSAERERHLHILHRP 188
>gi|156415996 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 35.4 bits (80), Expect = 0.021
Identities = 34/102 (33%), Positives = 36/102 (35%), Gaps = 35/102 (34%)
Query: 66 RAHPRQGTLAWPRSPPEP------GKLGSPRAKPDP----W-EGASRAEP-----GPGVA 109
R H Q + A P PPEP G AKP P W EGAS P GPG
Sbjct: 547 RHHREQRSGAGPGPPPEPPPPSQRGSAPQSGAKPSPQPATWVEGASSPRPPSSGAGPGSR 606
Query: 110 ARPCSP-------------------RGGNWMAAGCGGGRHTC 132
+P SP R G AG GG H C
Sbjct: 607 RKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGPGGALHRC 648
Score = 28.5 bits (62), Expect = 2.6
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 77 PRSPPEPGKLGSPRAKPDPWEGASRAEPGPGVAARPCSPRGGNWMAAGCG 126
P+ PP+P P+ +P+P E A P P AA P + CG
Sbjct: 232 PQPPPQPEPRSVPQPEPEP-EPEREATPTPAPAAPEEPPAPPEFRCQVCG 280
Score = 26.9 bits (58), Expect = 7.5
Identities = 29/106 (27%), Positives = 36/106 (33%), Gaps = 12/106 (11%)
Query: 52 QDLLCSDCGSGCS----LRAHPRQGTLAWPRSPP--------EPGKLGSPRAKPDPWEGA 99
Q C CG + LR+H R PRSP E L R G
Sbjct: 83 QAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLLLELEERALLREARLGRARSSGG 142
Query: 100 SRAEPGPGVAARPCSPRGGNWMAAGCGGGRHTCSEGDCGLQDLSPP 145
+A P ARP +P + C G T +E + L L P
Sbjct: 143 MQATPATEGLARPQAPSSSAFRCPYCKGKFRTSAERERHLHILHRP 188
>gi|116256460 zinc finger protein 775 [Homo sapiens]
Length = 537
Score = 35.0 bits (79), Expect = 0.027
Identities = 39/114 (34%), Positives = 45/114 (39%), Gaps = 23/114 (20%)
Query: 10 SLSKTLRRHSRNGQTGLYPKSQRRQCRRKTGQESRLLP-----ADLCQDLLCSDCGSGC- 63
S L RH RN TG P C R Q+ LL Q C CG C
Sbjct: 319 SQKPNLTRHLRN-HTGERPHPCPH-CGRGFRQKQHLLKHLRTHLPGAQAAPCPSCGKSCR 376
Query: 64 ---SLRAHPRQGTLAWPRSPPEPGKLGSPRAKPDPWEGASRAEPGPGVAARPCS 114
+LRAH R +A P P G P +P +AE PG+AARP S
Sbjct: 377 SRAALRAHQRAHAVAEPAVP-----AGEPGDQP-------QAEAIPGLAARPRS 418
Score = 32.3 bits (72), Expect = 0.18
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 8/73 (10%)
Query: 66 RAHPRQGTLAWPRSPPEPGKLGSPRAKPDPWEGASRAEPGPGVAARPCSPRGGNWMAAGC 125
R P + T+ PR+ + GSPR P + A A PG A+ P SP +
Sbjct: 49 RGLPPRQTMGRPRALGGQEESGSPRWAPPTEQDAGLAGRAPGSASGPLSP------SLSS 102
Query: 126 GGGRHTCSEGDCG 138
G G C DCG
Sbjct: 103 GEGHFVCL--DCG 113
>gi|32483397 dopamine receptor D4 [Homo sapiens]
Length = 419
Score = 34.7 bits (78), Expect = 0.036
Identities = 26/84 (30%), Positives = 32/84 (38%), Gaps = 18/84 (21%)
Query: 69 PRQGTLAWPRSPPEPGKLGSPRAKPDPWEGASRAEPGPGVAARPCSPRGGNWMAAGCGGG 128
PR+ + P SP P +PR DP G A P PG+ PC P C
Sbjct: 235 PRRPSGPGPPSPTPP----APRLPQDPC-GPDCAPPAPGLPRGPCGP--------DCAPA 281
Query: 129 RHTCSEGDCGLQDLSPPCPRPRPG 152
+ + CG P C P PG
Sbjct: 282 APSLPQDPCG-----PDCAPPAPG 300
>gi|239748716 PREDICTED: hypothetical protein XP_002346782 [Homo
sapiens]
Length = 267
Score = 34.7 bits (78), Expect = 0.036
Identities = 42/163 (25%), Positives = 59/163 (36%), Gaps = 18/163 (11%)
Query: 2 GHRAALWASLSKTLRRHSRNGQTGLYPKSQRRQCRRKTGQESRLLPADLCQDLLCSDCGS 61
G +AALW++L ++++ + GQ G+ S R+ +T Q P L C
Sbjct: 13 GCKAALWSTLGGSMQQSAPTGQWGIRADSSPRRRTVRTAQPKERSP------LRRGSCAR 66
Query: 62 GCSLRAHPRQGTLAWPRSP-PEPGKLGSP---RAKPDPWEGASRAEPG-PGVAARPCSPR 116
G P G W SP P P RA RAE G + + +
Sbjct: 67 GEKRPPGPTGGQWRWGVSPRPSAASATGPPQDRAARGCELREGRAEAGHSSTSQKDTLSK 126
Query: 117 GGNWMAAGCGGGRHTCSEGDCG------LQDLSPPCP-RPRPG 152
G A G+H G + +PP P R RPG
Sbjct: 127 GSAAAATAVAAGKHLAVPETRGGVPARRRETANPPGPGRARPG 169
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 34.3 bits (77), Expect = 0.047
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 83 PGKLGSPRAKPDPWEGASRAEPGPGVAARPCSPRG--GNWMAAGCGGGR 129
PG G P AK +P + ++ + GP A P P G GN A G G R
Sbjct: 817 PGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGAR 865
Score = 30.4 bits (67), Expect = 0.68
Identities = 28/88 (31%), Positives = 33/88 (37%), Gaps = 13/88 (14%)
Query: 77 PRSPP-EPGKLGSPRAKPDPWEGASRAEPGPGVAARPCSPRGGNWMAAGCGGGR----HT 131
P PP PG G+P + R E GP A P P G AG G R T
Sbjct: 1041 PAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARG-PAGPQGPRGDKGET 1099
Query: 132 CSEGDCGLQD-------LSPPCPRPRPG 152
+GD G++ PP P PG
Sbjct: 1100 GEQGDRGIKGHRGFSGLQGPPGPPGSPG 1127
Score = 28.9 bits (63), Expect = 2.0
Identities = 24/77 (31%), Positives = 27/77 (35%), Gaps = 9/77 (11%)
Query: 77 PRSPPEP-GKLGSPRAKPDPWEGASRAEPGPGVAARPCSPRGGNWMAAGCGGGRHTCSEG 135
P PP P G G P A + ++ EPGP P P G G G
Sbjct: 423 PGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARG------EPG 476
Query: 136 DCGLQDLSPPCPRPRPG 152
GL PP R PG
Sbjct: 477 PTGLP--GPPGERGGPG 491
Score = 27.7 bits (60), Expect = 4.4
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 7/70 (10%)
Query: 84 GKLGSPRAKPDPWEGASRAEPGPGVAARPCSPRGGNWMAAGCGGGRHTCSEGDCGLQ-DL 142
G G + P S E GP A+ P PRG A G +G GL +
Sbjct: 1109 GHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPG------KDGLNGLPGPI 1162
Query: 143 SPPCPRPRPG 152
PP PR R G
Sbjct: 1163 GPPGPRGRTG 1172
Score = 27.3 bits (59), Expect = 5.7
Identities = 24/77 (31%), Positives = 27/77 (35%), Gaps = 6/77 (7%)
Query: 77 PRSPP-EPGKLGSPRAKPDPWEGASRAEPGPGVAARPCSPRGGNWMAAGCGGGRHTCSEG 135
PR PP PGK G P R PGP A G M G ++G
Sbjct: 219 PRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKG 278
Query: 136 DCGLQDLSPPCPRPRPG 152
D G P P+ PG
Sbjct: 279 DAG-----PAGPKGEPG 290
Score = 27.3 bits (59), Expect = 5.7
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 10/75 (13%)
Query: 79 SPPEPGKLGSPRAKPDPWEGASRAEPGPGVAARPCSPRGGNWMAAGCGGGRHTCSEGDCG 138
+P PG G+P + P E + PGP P+G A G G +G G
Sbjct: 714 APGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKG----ADGSPG-----KDGVRG 764
Query: 139 LQ-DLSPPCPRPRPG 152
L + PP P PG
Sbjct: 765 LTGPIGPPGPAGAPG 779
Score = 27.3 bits (59), Expect = 5.7
Identities = 25/85 (29%), Positives = 29/85 (34%), Gaps = 3/85 (3%)
Query: 72 GTLAWPRSPPEPGKLGSPRAKPDPWEGASRAEPGPGVAARPCSPRGGNWMAAGCGGGRHT 131
G + P + G G P A P PGP A P P G G G T
Sbjct: 854 GNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGET 913
Query: 132 CSEGDCGLQDLSPPCPRPRPGHVHG 156
G G ++ PP P P P G
Sbjct: 914 GPAGRPG--EVGPPGP-PGPAGEKG 935
Score = 26.9 bits (58), Expect = 7.5
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 77 PRSPPEPGKLGSPRAKPDPWEGASRAEPG-PGV--AARPCSPRG 117
P + PG+ GSP AK D E PG PG A P P G
Sbjct: 1018 PGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAG 1061
>gi|169208912 PREDICTED: hypothetical protein [Homo sapiens]
Length = 266
Score = 34.3 bits (77), Expect = 0.047
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 13/67 (19%)
Query: 78 RSPPEPGKLGSPRAKPDPWEGASRAEPGPGVAARPCSPRGGNWMAAG-CGGGRHTCSEGD 136
R+PP+ P A PW R + GPG P GG A G CG C+ G
Sbjct: 33 RAPPQSPPPAGPGAPGAPWR---RGDEGPG-------PAGGE--AGGPCGAAPGGCASGG 80
Query: 137 CGLQDLS 143
CG+ +S
Sbjct: 81 CGVMGVS 87
>gi|169208667 PREDICTED: hypothetical protein [Homo sapiens]
Length = 266
Score = 34.3 bits (77), Expect = 0.047
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 13/67 (19%)
Query: 78 RSPPEPGKLGSPRAKPDPWEGASRAEPGPGVAARPCSPRGGNWMAAG-CGGGRHTCSEGD 136
R+PP+ P A PW R + GPG P GG A G CG C+ G
Sbjct: 33 RAPPQSPPPAGPGAPGAPWR---RGDEGPG-------PAGGE--AGGPCGAAPGGCASGG 80
Query: 137 CGLQDLS 143
CG+ +S
Sbjct: 81 CGVMGVS 87
>gi|169207782 PREDICTED: hypothetical protein [Homo sapiens]
Length = 330
Score = 34.3 bits (77), Expect = 0.047
Identities = 34/103 (33%), Positives = 40/103 (38%), Gaps = 17/103 (16%)
Query: 59 CGSGCSL-------RAHPRQGTLAWPRSPPEPGK-LGSPRAKPDPWEGASRAEPGPGVAA 110
CG +L R PR G R PG+ L +P A+P G PG G AA
Sbjct: 156 CGGAAALQQEPTNFRGRPRPGA----RGTDPPGRTLPAPLARPSTQPGR---RPGLGRAA 208
Query: 111 RPCSPRGGNWMAAG--CGGGRHTCSEGDCGLQDLSPPCPRPRP 151
P PRG AG GGR G + + P P RP
Sbjct: 209 SPLGPRGAGVTGAGPATQGGRDRGRWGRWVRRRVPCPLPGLRP 251
>gi|169208084 PREDICTED: hypothetical protein [Homo sapiens]
Length = 266
Score = 34.3 bits (77), Expect = 0.047
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 13/67 (19%)
Query: 78 RSPPEPGKLGSPRAKPDPWEGASRAEPGPGVAARPCSPRGGNWMAAG-CGGGRHTCSEGD 136
R+PP+ P A PW R + GPG P GG A G CG C+ G
Sbjct: 33 RAPPQSPPPAGPGAPGAPWR---RGDEGPG-------PAGGE--AGGPCGAAPGGCASGG 80
Query: 137 CGLQDLS 143
CG+ +S
Sbjct: 81 CGVMGVS 87
>gi|169207076 PREDICTED: hypothetical protein [Homo sapiens]
Length = 330
Score = 34.3 bits (77), Expect = 0.047
Identities = 34/103 (33%), Positives = 40/103 (38%), Gaps = 17/103 (16%)
Query: 59 CGSGCSL-------RAHPRQGTLAWPRSPPEPGK-LGSPRAKPDPWEGASRAEPGPGVAA 110
CG +L R PR G R PG+ L +P A+P G PG G AA
Sbjct: 156 CGGAAALQQEPTNFRGRPRPGA----RGTDPPGRTLPAPLARPSTQPGR---RPGLGRAA 208
Query: 111 RPCSPRGGNWMAAG--CGGGRHTCSEGDCGLQDLSPPCPRPRP 151
P PRG AG GGR G + + P P RP
Sbjct: 209 SPLGPRGAGVTGAGPATQGGRDRGRWGRWVRRRVPCPLPGLRP 251
>gi|13994190 frizzled 8 [Homo sapiens]
Length = 694
Score = 34.3 bits (77), Expect = 0.047
Identities = 29/94 (30%), Positives = 30/94 (31%), Gaps = 4/94 (4%)
Query: 46 LPADLCQDLLCSDCGSGCSLRAHPRQGTLAWPRSPPEPGKLGSPRAKPD----PWEGASR 101
LP D LC D A P P P E GS +P P G R
Sbjct: 138 LPEQGNPDTLCMDYNRTDLTTAAPSPPRRLPPPPPGEQPPSGSGHGRPPGARPPHRGGGR 197
Query: 102 AEPGPGVAARPCSPRGGNWMAAGCGGGRHTCSEG 135
G AA P GG A GGG C G
Sbjct: 198 GGGGGDAAAPPARGGGGGGKARPPGGGAAPCEPG 231
>gi|156938257 leucine rich repeat containing 16B [Homo sapiens]
Length = 1372
Score = 34.3 bits (77), Expect = 0.047
Identities = 31/98 (31%), Positives = 36/98 (36%), Gaps = 16/98 (16%)
Query: 69 PRQGTLAWPRSPPEPGKLGSPRAKPDPWEGASRAEPGPGVAARPC-SPRGGNWMAAGCGG 127
P G L P PP P + P PDP P G + PC SP + + G GG
Sbjct: 1073 PTTGLLLPPPPPPPPTQESPP--SPDP--------PSLGNNSSPCWSPEEESSLLPGFGG 1122
Query: 128 GRHTCSEGDCGLQDLSPPCPRPRPG-----HVHGFLDP 160
GR G + P P PG VHG P
Sbjct: 1123 GRGPSFRRKMGTEGSEPGEGGPAPGTAQQPRVHGVALP 1160
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 34.3 bits (77), Expect = 0.047
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 12/104 (11%)
Query: 68 HPRQGTLAWPRSPPE-PGKLGSPRAKPD---PWEGASRAEPGPGVAARPCSPRGGNWMAA 123
HP G L + P PG G P A P+ + A+ A GPG A PC + G +
Sbjct: 144 HPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSP 203
Query: 124 GCGGGRHTCSEGDCG-------LQDLSPPCPRPRPGHVHGFLDP 160
G G H+ S G LQ+ P + H G+ P
Sbjct: 204 GM-GMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRP 246
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 34.3 bits (77), Expect = 0.047
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 12/104 (11%)
Query: 68 HPRQGTLAWPRSPPE-PGKLGSPRAKPD---PWEGASRAEPGPGVAARPCSPRGGNWMAA 123
HP G L + P PG G P A P+ + A+ A GPG A PC + G +
Sbjct: 144 HPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSP 203
Query: 124 GCGGGRHTCSEGDCG-------LQDLSPPCPRPRPGHVHGFLDP 160
G G H+ S G LQ+ P + H G+ P
Sbjct: 204 GM-GMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRP 246
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 34.3 bits (77), Expect = 0.047
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 12/104 (11%)
Query: 68 HPRQGTLAWPRSPPE-PGKLGSPRAKPD---PWEGASRAEPGPGVAARPCSPRGGNWMAA 123
HP G L + P PG G P A P+ + A+ A GPG A PC + G +
Sbjct: 144 HPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSP 203
Query: 124 GCGGGRHTCSEGDCG-------LQDLSPPCPRPRPGHVHGFLDP 160
G G H+ S G LQ+ P + H G+ P
Sbjct: 204 GM-GMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRP 246
>gi|169210256 PREDICTED: hypothetical protein [Homo sapiens]
Length = 447
Score = 33.9 bits (76), Expect = 0.061
Identities = 26/90 (28%), Positives = 32/90 (35%), Gaps = 27/90 (30%)
Query: 77 PRSPPEPGKLGSPRAKPDPWEG-------ASRAEPGPGVAARPCSPRG----GNWMAAGC 125
P P EPG+ +PR+ P E SRA G G PC G+W + C
Sbjct: 294 PGEPAEPGRARAPRSAPSSREPRQTKRRVGSRARAGAGAVTGPCPAAAQGARGSWPSPRC 353
Query: 126 ----GGGRHTCSEGDCGLQDLSPPCPRPRP 151
GG R +PP P P
Sbjct: 354 LPSDGGARE------------APPTSAPHP 371
>gi|239755304 PREDICTED: hypothetical protein XP_002344521 [Homo
sapiens]
Length = 209
Score = 33.9 bits (76), Expect = 0.061
Identities = 28/63 (44%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Query: 57 SDCGSGCS--LRAHPRQGTLAWPRSP--PEPGKLGSPRAKPDPWEGASRAEPGPGVAARP 112
S G GC+ LR PR+G PR P P PG L +PRA P + +RA P P A R
Sbjct: 150 SAMGEGCARCLRLPPRRGP---PRPPGLPYPGGLAAPRASPP--QHPNRAAP-PASARRL 203
Query: 113 CSP 115
SP
Sbjct: 204 RSP 206
>gi|239749797 PREDICTED: hypothetical protein XP_002347167 [Homo
sapiens]
Length = 209
Score = 33.9 bits (76), Expect = 0.061
Identities = 28/63 (44%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Query: 57 SDCGSGCS--LRAHPRQGTLAWPRSP--PEPGKLGSPRAKPDPWEGASRAEPGPGVAARP 112
S G GC+ LR PR+G PR P P PG L +PRA P + +RA P P A R
Sbjct: 150 SAMGEGCARCLRLPPRRGP---PRPPGLPYPGGLAAPRASPP--QHPNRAAP-PASARRL 203
Query: 113 CSP 115
SP
Sbjct: 204 RSP 206
>gi|239744069 PREDICTED: hypothetical protein XP_002344285 [Homo
sapiens]
Length = 209
Score = 33.9 bits (76), Expect = 0.061
Identities = 28/63 (44%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Query: 57 SDCGSGCS--LRAHPRQGTLAWPRSP--PEPGKLGSPRAKPDPWEGASRAEPGPGVAARP 112
S G GC+ LR PR+G PR P P PG L +PRA P + +RA P P A R
Sbjct: 150 SAMGEGCARCLRLPPRRGP---PRPPGLPYPGGLAAPRASPP--QHPNRAAP-PASARRL 203
Query: 113 CSP 115
SP
Sbjct: 204 RSP 206
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.138 0.478
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,727,121
Number of Sequences: 37866
Number of extensions: 629561
Number of successful extensions: 4751
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 443
Number of HSP's that attempted gapping in prelim test: 3793
Number of HSP's gapped (non-prelim): 1388
length of query: 160
length of database: 18,247,518
effective HSP length: 94
effective length of query: 66
effective length of database: 14,688,114
effective search space: 969415524
effective search space used: 969415524
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.