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Search of human proteins with 16554611
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|16554611 mitochondrial ribosomal protein S15 [Homo sapiens]
(257 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|16554611 mitochondrial ribosomal protein S15 [Homo sapiens] 511 e-145
gi|87116683 proline/serine-rich coiled-coil 2 [Homo sapiens] 38 0.010
gi|148833504 interleukin 16 isoform 2 [Homo sapiens] 33 0.24
gi|62821790 leucine zipper protein 2 [Homo sapiens] 33 0.24
gi|151101151 coiled-coil domain containing 2 isoform b [Homo sap... 32 0.42
gi|151101140 coiled-coil domain containing 2 isoform a [Homo sap... 32 0.42
gi|151105223 coiled-coil domain containing 2 isoform a [Homo sap... 32 0.42
gi|151105229 coiled-coil domain containing 2 isoform a [Homo sap... 32 0.42
gi|117414148 hypothetical protein LOC221322 [Homo sapiens] 32 0.42
gi|118918407 spectrin repeat containing, nuclear envelope 2 isof... 32 0.54
gi|118918403 spectrin repeat containing, nuclear envelope 2 isof... 32 0.54
gi|33356174 pinin, desmosome associated protein [Homo sapiens] 32 0.54
gi|44890052 stathmin 1 isoform a [Homo sapiens] 32 0.71
gi|44890050 stathmin 1 isoform a [Homo sapiens] 32 0.71
gi|5031851 stathmin 1 isoform a [Homo sapiens] 32 0.71
gi|223005859 WD repeat domain 67 isoform 1 [Homo sapiens] 31 0.93
gi|223005857 WD repeat domain 67 isoform 2 [Homo sapiens] 31 0.93
gi|115527120 nebulin [Homo sapiens] 31 0.93
gi|75677374 SLIT-ROBO Rho GTPase activating protein 3 isoform b ... 31 0.93
gi|24307967 SLIT-ROBO Rho GTPase activating protein 3 isoform a ... 31 0.93
gi|62420877 electron-transfer-flavoprotein, beta polypeptide iso... 31 1.2
gi|110349719 titin isoform N2-A [Homo sapiens] 30 1.6
gi|28269693 xylosyltransferase I [Homo sapiens] 30 1.6
gi|110815815 centlein isoform 1 [Homo sapiens] 30 1.6
gi|167555106 centlein isoform 2 [Homo sapiens] 30 1.6
gi|224465238 hypothetical protein LOC283999 [Homo sapiens] 30 2.1
gi|29570785 CCCTC-binding factor-like protein [Homo sapiens] 30 2.1
gi|122891870 melanoma inhibitory activity family, member 3 [Homo... 30 2.7
gi|229608967 spermatogenic leucine zipper 1 [Homo sapiens] 30 2.7
gi|32698688 citron [Homo sapiens] 30 2.7
>gi|16554611 mitochondrial ribosomal protein S15 [Homo sapiens]
Length = 257
Score = 511 bits (1315), Expect = e-145
Identities = 257/257 (100%), Positives = 257/257 (100%)
Query: 1 MLRVAWRTLSLIRTRAVTQVLVPGLPGGGSAKFPFNQWGLQPRSLLLQAARGYVVRKPAQ 60
MLRVAWRTLSLIRTRAVTQVLVPGLPGGGSAKFPFNQWGLQPRSLLLQAARGYVVRKPAQ
Sbjct: 1 MLRVAWRTLSLIRTRAVTQVLVPGLPGGGSAKFPFNQWGLQPRSLLLQAARGYVVRKPAQ 60
Query: 61 SRLDDDPPPSTLLKDYQNVPGIEKVDDVVKRLLSLEMANKKEMLKIKQEQFMKKIVANPE 120
SRLDDDPPPSTLLKDYQNVPGIEKVDDVVKRLLSLEMANKKEMLKIKQEQFMKKIVANPE
Sbjct: 61 SRLDDDPPPSTLLKDYQNVPGIEKVDDVVKRLLSLEMANKKEMLKIKQEQFMKKIVANPE 120
Query: 121 DTRSLEARIIALSVKIRSYEEHLEKHRKDKAHKRYLLMSIDQRKKMLKNLRNTNYDVFEK 180
DTRSLEARIIALSVKIRSYEEHLEKHRKDKAHKRYLLMSIDQRKKMLKNLRNTNYDVFEK
Sbjct: 121 DTRSLEARIIALSVKIRSYEEHLEKHRKDKAHKRYLLMSIDQRKKMLKNLRNTNYDVFEK 180
Query: 181 ICWGLGIEYTFPPLYYRRAHRRFVTKKALCIRVFQETQKLKKRRRALKAAAAAQKQAKRR 240
ICWGLGIEYTFPPLYYRRAHRRFVTKKALCIRVFQETQKLKKRRRALKAAAAAQKQAKRR
Sbjct: 181 ICWGLGIEYTFPPLYYRRAHRRFVTKKALCIRVFQETQKLKKRRRALKAAAAAQKQAKRR 240
Query: 241 NPDSPAKAIPKTLKDSQ 257
NPDSPAKAIPKTLKDSQ
Sbjct: 241 NPDSPAKAIPKTLKDSQ 257
>gi|87116683 proline/serine-rich coiled-coil 2 [Homo sapiens]
Length = 1989
Score = 37.7 bits (86), Expect = 0.010
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 34/198 (17%)
Query: 58 PAQSRLDDDPPPSTLLKDYQNVPGIEKVDDVVKRLLSLEMANKKEMLKIKQEQF--MKKI 115
P +S ++DP L+ + +P +K++ RLL E+AN+++ IK +Q
Sbjct: 754 PPKSEKENDP-----LRTPEALPEEKKIE---YRLLKEEIANREKQRLIKSDQLKTSSSS 805
Query: 116 VANPEDTRSLEARIIALSVKIRSYEEHLEKHR----KDKAHKRYLLMSIDQRKKMLKNLR 171
AN + RI ++ ++ E L+KHR KD++ + L+ ++K+ ++N
Sbjct: 806 PANSDVEIDGIGRIAMVTKQVTDAESKLKKHRILLMKDESVLKNLVQQEAKKKESVRNAE 865
Query: 172 ------NTNYDVFEKICWGLGIEYTFPPLYYRRAHR---RFVTKKALCIRVFQETQKLKK 222
EKI L + F + HR R KKAL ++ +E + K
Sbjct: 866 AKITKLTEQLQATEKI---LNVNRMFLKKLQEQIHRVQQRVTIKKALTLKYGEELARAK- 921
Query: 223 RRRALKAAAAAQKQAKRR 240
A A+++ KR+
Sbjct: 922 -------AVASKEIGKRK 932
>gi|148833504 interleukin 16 isoform 2 [Homo sapiens]
Length = 1332
Score = 33.1 bits (74), Expect = 0.24
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 9/105 (8%)
Query: 24 GLPGGGSAKFPFNQWGLQPRSLLLQAARGYVVRKPAQSRLDDDPPPSTLLKDYQNVPGIE 83
G PG GSA+ P + + S L AR VV A SRL + PP +D ++
Sbjct: 523 GSPGSGSAEKPSSDVDISTHSPSLPLAREPVVLSIASSRLPQESPPLPESRDSHPPLRLK 582
Query: 84 KVDDVVKRLLSLEMANKKEMLKIKQEQFMKKIVANPEDTRSLEAR 128
K S E+ +K M + K ++ + +SLE R
Sbjct: 583 K---------SFEILVRKPMSSKPKPPPRKYFKSDSDPQKSLEER 618
>gi|62821790 leucine zipper protein 2 [Homo sapiens]
Length = 346
Score = 33.1 bits (74), Expect = 0.24
Identities = 41/192 (21%), Positives = 82/192 (42%), Gaps = 16/192 (8%)
Query: 70 STLLKDYQNVPGIEKVDDVVKRLLSLEMANKKEMLKIKQEQFMKKIVANPEDTRSLEARI 129
ST+L+ ++D + L SL+ N ++ K ++ ++ E+ +SL+
Sbjct: 39 STILRQLTKTS--RELDGIKVNLQSLK--NDEQSAKTDVQKLLELGQKQREEMKSLQE-- 92
Query: 130 IALSVKIRSYEEHLEKHRKDKAHKRYLLMSIDQRKKMLKNLRNTNYDVFEKICWG---LG 186
AL +++ E EKH+ A +L ++++ KM+++L+N N + K+ G G
Sbjct: 93 -ALQNQLKETSEKAEKHQ---ATINFLKTEVERKSKMIRDLQNENKSLKNKLLSGNKLCG 148
Query: 187 IEYTFPPLYYRRAHRRFVTKKALCIRVFQET---QKLKKRRRALKAAAAAQKQAKRRNPD 243
I + KK L + Q T QKL + L+ AA ++ + +
Sbjct: 149 IHAEESKKIQAQLKELRYGKKDLLFKAQQLTDLEQKLAVAKNELEKAALDRESQMKAMKE 208
Query: 244 SPAKAIPKTLKD 255
+ + +D
Sbjct: 209 TVQLCLTSVFRD 220
>gi|151101151 coiled-coil domain containing 2 isoform b [Homo
sapiens]
Length = 372
Score = 32.3 bits (72), Expect = 0.42
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 83 EKVDDVVKRLLS------LEMANKKEMLKIKQEQFMKKIVANPEDTRSLEARIIALSVKI 136
+ DD++K + LEM E L + + +++ + SLEA I VK
Sbjct: 213 QATDDIIKNMSFENQVKYLEMKTTNEKLLQELDTLQQQLDSQNMKKESLEAEIAHSQVKQ 272
Query: 137 RSYEEH-----LEKHRKDK-AHKRYLLMSIDQRKKMLKNLRNTNYDV 177
+ H LE HR A + + +++R+K+LK +++ N ++
Sbjct: 273 EAVLLHEKLYELESHRDQMIAEDKSIGSPMEEREKLLKQIKDDNQEI 319
>gi|151101140 coiled-coil domain containing 2 isoform a [Homo
sapiens]
Length = 600
Score = 32.3 bits (72), Expect = 0.42
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 83 EKVDDVVKRLLS------LEMANKKEMLKIKQEQFMKKIVANPEDTRSLEARIIALSVKI 136
+ DD++K + LEM E L + + +++ + SLEA I VK
Sbjct: 213 QATDDIIKNMSFENQVKYLEMKTTNEKLLQELDTLQQQLDSQNMKKESLEAEIAHSQVKQ 272
Query: 137 RSYEEH-----LEKHRKDK-AHKRYLLMSIDQRKKMLKNLRNTNYDV 177
+ H LE HR A + + +++R+K+LK +++ N ++
Sbjct: 273 EAVLLHEKLYELESHRDQMIAEDKSIGSPMEEREKLLKQIKDDNQEI 319
>gi|151105223 coiled-coil domain containing 2 isoform a [Homo
sapiens]
Length = 600
Score = 32.3 bits (72), Expect = 0.42
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 83 EKVDDVVKRLLS------LEMANKKEMLKIKQEQFMKKIVANPEDTRSLEARIIALSVKI 136
+ DD++K + LEM E L + + +++ + SLEA I VK
Sbjct: 213 QATDDIIKNMSFENQVKYLEMKTTNEKLLQELDTLQQQLDSQNMKKESLEAEIAHSQVKQ 272
Query: 137 RSYEEH-----LEKHRKDK-AHKRYLLMSIDQRKKMLKNLRNTNYDV 177
+ H LE HR A + + +++R+K+LK +++ N ++
Sbjct: 273 EAVLLHEKLYELESHRDQMIAEDKSIGSPMEEREKLLKQIKDDNQEI 319
>gi|151105229 coiled-coil domain containing 2 isoform a [Homo
sapiens]
Length = 600
Score = 32.3 bits (72), Expect = 0.42
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 83 EKVDDVVKRLLS------LEMANKKEMLKIKQEQFMKKIVANPEDTRSLEARIIALSVKI 136
+ DD++K + LEM E L + + +++ + SLEA I VK
Sbjct: 213 QATDDIIKNMSFENQVKYLEMKTTNEKLLQELDTLQQQLDSQNMKKESLEAEIAHSQVKQ 272
Query: 137 RSYEEH-----LEKHRKDK-AHKRYLLMSIDQRKKMLKNLRNTNYDV 177
+ H LE HR A + + +++R+K+LK +++ N ++
Sbjct: 273 EAVLLHEKLYELESHRDQMIAEDKSIGSPMEEREKLLKQIKDDNQEI 319
>gi|117414148 hypothetical protein LOC221322 [Homo sapiens]
Length = 1257
Score = 32.3 bits (72), Expect = 0.42
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 67 PPPSTLLKDYQNVPGIEKVDDVVKRLLSLEMANKK-EMLKIKQEQFMKKIVANPE 120
P P+ L D GI++ +D+ K LL L++++K+ E ++ Q QF K + A P+
Sbjct: 907 PLPNCYLSDITRNAGIKQDNDLDKLLLCLKISDKQTEWIENCQRQFCKMMKAKPD 961
>gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform 5
[Homo sapiens]
Length = 6907
Score = 32.0 bits (71), Expect = 0.54
Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 8/142 (5%)
Query: 95 LEMANKKEMLK--IKQEQFMKKIVANPEDTRSLEARIIALSVKIRSYEEHLEKHRKDKAH 152
+++ N +E L+ +++++ ++ VA+ +D I + K++ E K+ A
Sbjct: 3284 VDVGNPEESLEMPLRKQEELESTVAHIQDLTEKLGMISSPEAKLQLQYTLQELVSKNSAM 3343
Query: 153 KRYLLMSIDQRKKMLKNL---RNTNYDVF---EKICWGLGIEYTFPPLYYRRAHRRFVTK 206
K + ++ L+N R D++ K+ LG + PL YR A R
Sbjct: 3344 KEAFKAQETEAERYLENYKCYRKMEEDIYTNLSKMETVLGQSMSSLPLSYREALERLEQS 3403
Query: 207 KALCIRVFQETQKLKKRRRALK 228
KAL + ++L K R+ L+
Sbjct: 3404 KALVSNLISTKEELMKLRQILR 3425
>gi|118918403 spectrin repeat containing, nuclear envelope 2 isoform 1
[Homo sapiens]
Length = 6885
Score = 32.0 bits (71), Expect = 0.54
Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 8/142 (5%)
Query: 95 LEMANKKEMLK--IKQEQFMKKIVANPEDTRSLEARIIALSVKIRSYEEHLEKHRKDKAH 152
+++ N +E L+ +++++ ++ VA+ +D I + K++ E K+ A
Sbjct: 3284 VDVGNPEESLEMPLRKQEELESTVAHIQDLTEKLGMISSPEAKLQLQYTLQELVSKNSAM 3343
Query: 153 KRYLLMSIDQRKKMLKNL---RNTNYDVF---EKICWGLGIEYTFPPLYYRRAHRRFVTK 206
K + ++ L+N R D++ K+ LG + PL YR A R
Sbjct: 3344 KEAFKAQETEAERYLENYKCYRKMEEDIYTNLSKMETVLGQSMSSLPLSYREALERLEQS 3403
Query: 207 KALCIRVFQETQKLKKRRRALK 228
KAL + ++L K R+ L+
Sbjct: 3404 KALVSNLISTKEELMKLRQILR 3425
>gi|33356174 pinin, desmosome associated protein [Homo sapiens]
Length = 717
Score = 32.0 bits (71), Expect = 0.54
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 88 VVKRLLSLEMANKKEMLKIKQEQFMKKIVANPEDTRSLEARIIALS 133
V R L ++ KE LK E K +P D R ++AR++ALS
Sbjct: 3 VAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALS 48
>gi|44890052 stathmin 1 isoform a [Homo sapiens]
Length = 149
Score = 31.6 bits (70), Expect = 0.71
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 90 KRLLSLEMANKKEMLKIKQEQFMKKIVANPEDTRSLEARIIALSVKIRSYEEHLEKHRKD 149
K +L + K+ +E+ K+ AN E+ EA++ A ++R ++H+E+ RK+
Sbjct: 80 KEVLQKAIEENNNFSKMAEEKLTHKMEANKENR---EAQMAAKLERLREKDKHIEEVRKN 136
Query: 150 KAHK 153
K K
Sbjct: 137 KESK 140
>gi|44890050 stathmin 1 isoform a [Homo sapiens]
Length = 149
Score = 31.6 bits (70), Expect = 0.71
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 90 KRLLSLEMANKKEMLKIKQEQFMKKIVANPEDTRSLEARIIALSVKIRSYEEHLEKHRKD 149
K +L + K+ +E+ K+ AN E+ EA++ A ++R ++H+E+ RK+
Sbjct: 80 KEVLQKAIEENNNFSKMAEEKLTHKMEANKENR---EAQMAAKLERLREKDKHIEEVRKN 136
Query: 150 KAHK 153
K K
Sbjct: 137 KESK 140
>gi|5031851 stathmin 1 isoform a [Homo sapiens]
Length = 149
Score = 31.6 bits (70), Expect = 0.71
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 90 KRLLSLEMANKKEMLKIKQEQFMKKIVANPEDTRSLEARIIALSVKIRSYEEHLEKHRKD 149
K +L + K+ +E+ K+ AN E+ EA++ A ++R ++H+E+ RK+
Sbjct: 80 KEVLQKAIEENNNFSKMAEEKLTHKMEANKENR---EAQMAAKLERLREKDKHIEEVRKN 136
Query: 150 KAHK 153
K K
Sbjct: 137 KESK 140
>gi|223005859 WD repeat domain 67 isoform 1 [Homo sapiens]
Length = 1066
Score = 31.2 bits (69), Expect = 0.93
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 73 LKDYQNVPGIE-KVDDVVKRLLSLEMANKKEMLKIKQEQFMKKIVANPEDTRSLEARIIA 131
L++ Q V ++ KVD +R+ K+E+L+ +E + ++ E R+ A
Sbjct: 703 LRERQTVEDMQAKVDQ--QRVEDEAWYQKQELLRKAEETRREMLLQEEEKMIQQRQRLAA 760
Query: 132 LSVKIRSYEEHLEKHRKDKAHKRYLLMSIDQRKKMLKNL 170
+ +++ E HL+ D A +R+L + DQ++ L+ L
Sbjct: 761 VKRELKVKEMHLQ----DAARRRFLKLQQDQQEMELRRL 795
>gi|223005857 WD repeat domain 67 isoform 2 [Homo sapiens]
Length = 970
Score = 31.2 bits (69), Expect = 0.93
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 73 LKDYQNVPGIE-KVDDVVKRLLSLEMANKKEMLKIKQEQFMKKIVANPEDTRSLEARIIA 131
L++ Q V ++ KVD +R+ K+E+L+ +E + ++ E R+ A
Sbjct: 703 LRERQTVEDMQAKVDQ--QRVEDEAWYQKQELLRKAEETRREMLLQEEEKMIQQRQRLAA 760
Query: 132 LSVKIRSYEEHLEKHRKDKAHKRYLLMSIDQRKKMLKNL 170
+ +++ E HL+ D A +R+L + DQ++ L+ L
Sbjct: 761 VKRELKVKEMHLQ----DAARRRFLKLQQDQQEMELRRL 795
>gi|115527120 nebulin [Homo sapiens]
Length = 6669
Score = 31.2 bits (69), Expect = 0.93
Identities = 35/179 (19%), Positives = 74/179 (41%), Gaps = 24/179 (13%)
Query: 85 VDDVVKRLLSLEMANKKEMLKIKQEQFMKKIVAN--PEDTRSLEARIIALSVKIRSYEEH 142
V D +L+L + LK K++ ++ + P+ + L A+ ++ V Y++H
Sbjct: 5596 VTDDKNTVLALRNTLIESDLKYKEKHVKERGTCHAVPDTPQILLAKTVSNLVSENKYKDH 5655
Query: 143 LEKH-----------RKDKAHKRYLLMSI---DQRKKMLKNLRNTNYDVF---EKICWGL 185
++KH +D H + + + + +KK +K +NY + ++ +
Sbjct: 5656 VKKHLAQGSYTTLPETRDTVHVKEVTKHVSDTNYKKKFVKEKGKSNYSIMLEPPEVKHAM 5715
Query: 186 GIEYTFPPLYYRRAHRRFVTKKALCIRVFQETQKLKKRRRALKAAAAAQKQAKRRNPDS 244
+ + YR+ K+ L + +KK +A K A+ + +AK R S
Sbjct: 5716 EVAKKQSDVAYRKD-----AKENLHYTTVADRPDIKKATQAAKQASEVEYRAKHRKEGS 5769
>gi|75677374 SLIT-ROBO Rho GTPase activating protein 3 isoform b
[Homo sapiens]
Length = 1075
Score = 31.2 bits (69), Expect = 0.93
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 91 RLLSLEMANKKEMLKIKQEQFMKKIVANPEDTRSLEARIIALSVKIRSYEEHLEKHRKDK 150
+ L + ++ ++L+ QE F +K E +RSLE S KIRS EH + +KD
Sbjct: 33 KCLEQQSESRLQLLQDLQEFFRRKAEIELEYSRSLEKLAERFSSKIRSSREH--QFKKD- 89
Query: 151 AHKRYLLMSIDQRKKMLKNLRNTNYD 176
+YLL ++ +L R + D
Sbjct: 90 ---QYLLSPVNCWYLVLHQTRRESRD 112
>gi|24307967 SLIT-ROBO Rho GTPase activating protein 3 isoform a
[Homo sapiens]
Length = 1099
Score = 31.2 bits (69), Expect = 0.93
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 91 RLLSLEMANKKEMLKIKQEQFMKKIVANPEDTRSLEARIIALSVKIRSYEEHLEKHRKDK 150
+ L + ++ ++L+ QE F +K E +RSLE S KIRS EH + +KD
Sbjct: 33 KCLEQQSESRLQLLQDLQEFFRRKAEIELEYSRSLEKLAERFSSKIRSSREH--QFKKD- 89
Query: 151 AHKRYLLMSIDQRKKMLKNLRNTNYD 176
+YLL ++ +L R + D
Sbjct: 90 ---QYLLSPVNCWYLVLHQTRRESRD 112
>gi|62420877 electron-transfer-flavoprotein, beta polypeptide
isoform 2 [Homo sapiens]
Length = 346
Score = 30.8 bits (68), Expect = 1.2
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 15/97 (15%)
Query: 26 PGGGSAKFPFNQWGLQPRSLLLQAARGYVVRKPAQSRLDDDP---PPSTLLKDYQNVPGI 82
PG G A F Q +L+Q RG +R P DP PP+ ++ + G+
Sbjct: 68 PGQGPAPF-------QAVVVLIQPGRGLALRPPPSCLFPPDPTPSPPAGQIRVKPDRTGV 120
Query: 83 EKVDDVVKRLLS--LEMANKKEMLKIKQEQFMKKIVA 117
V D VK ++ E+A +E +++K+++ +K+++A
Sbjct: 121 --VTDGVKHSMNPFCEIA-VEEAVRLKEKKLVKEVIA 154
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 30.4 bits (67), Expect = 1.6
Identities = 23/110 (20%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Query: 58 PAQSRLDDDPPPSTLLKDYQNVPGIEKVDDVVKRLLSLEMANKKEMLKIKQEQFMKKIVA 117
P + + PPP+TL+ P I V + + + + KKE+ K K+ + KK
Sbjct: 9005 PREEIVKKPPPPTTLIP--AKAPEIIDVSSKAEEVKIMTITRKKEVQKEKEAVYEKKQAV 9062
Query: 118 NPEDTRSLEARIIAL-SVKIRSYEEHLEKHRKDKAHKRYLLMSIDQRKKM 166
+ E +E+ +++ Y E E+ ++ + Y + ++ +K++
Sbjct: 9063 HKEKRVFIESFEEPYDELEVEPYTEPFEQPYYEEPDEDYEEIKVEAKKEV 9112
>gi|28269693 xylosyltransferase I [Homo sapiens]
Length = 959
Score = 30.4 bits (67), Expect = 1.6
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 13/100 (13%)
Query: 24 GLPGGGSAKFPFNQWGLQPRSL--------LLQAARGYVVRKPAQSRLDDDPPPSTLLKD 75
G PG + P ++ L R+L L+ GY +P + D +++ KD
Sbjct: 100 GGPGEPRGQQPASRGALPARALDPHPSPLITLETQDGYFSHRPKEKVRTDSNNENSVPKD 159
Query: 76 YQNVPGIEKVDDVVKRLLSLEMANK-----KEMLKIKQEQ 110
++NV K+ E+A K KE+LK K EQ
Sbjct: 160 FENVDNSNFAPRTQKQKHQPELAKKPPSRQKELLKRKLEQ 199
>gi|110815815 centlein isoform 1 [Homo sapiens]
Length = 1406
Score = 30.4 bits (67), Expect = 1.6
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 83 EKVDDVVKRLLSLEMAN-----------KKEMLKIKQEQFMKKIVANPEDT-----RSLE 126
++++D+VKR ++++ N KK K ++ + K+ V N E+ ++LE
Sbjct: 185 QEINDLVKRKIAVDEENAFLRKEFSDLEKKFKDKSQEIKDTKECVQNKEEQNRLVIKNLE 244
Query: 127 ARIIALSVKIRSYEEHLEKHRKDKAHKRYLLMSIDQRKKMLKN 169
LS + LEK RK +AH R S D + K ++
Sbjct: 245 EENKKLSTRCTDLLNDLEKLRKQEAHLRKEKYSTDAKIKTFED 287
Score = 28.5 bits (62), Expect = 6.0
Identities = 18/87 (20%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 80 PGIEKVDDVVKRLLSLEMANKKEMLKIKQEQFMKKIVANPEDTRSLEARIIALSVKIRSY 139
P I+ R + LEM + L+ K + ++ + ++L+ ++A I+
Sbjct: 1077 PRIQVTSLSPSRSMDLEM----KQLQYKLKNATNELTKQSSNVKTLKFELLAKEEHIKEM 1132
Query: 140 EEHLEKHRKDKAHKRYLLMSIDQRKKM 166
E + + +D KR+L+ + R+K+
Sbjct: 1133 HEKISRMERDITMKRHLIEDLKFRQKV 1159
>gi|167555106 centlein isoform 2 [Homo sapiens]
Length = 391
Score = 30.4 bits (67), Expect = 1.6
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 83 EKVDDVVKRLLSLEMAN-----------KKEMLKIKQEQFMKKIVANPEDT-----RSLE 126
++++D+VKR ++++ N KK K ++ + K+ V N E+ ++LE
Sbjct: 185 QEINDLVKRKIAVDEENAFLRKEFSDLEKKFKDKSQEIKDTKECVQNKEEQNRLVIKNLE 244
Query: 127 ARIIALSVKIRSYEEHLEKHRKDKAHKRYLLMSIDQRKKMLKN 169
LS + LEK RK +AH R S D + K ++
Sbjct: 245 EENKKLSTRCTDLLNDLEKLRKQEAHLRKEKYSTDAKIKTFED 287
>gi|224465238 hypothetical protein LOC283999 [Homo sapiens]
Length = 394
Score = 30.0 bits (66), Expect = 2.1
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Query: 19 QVLVPGLPGGGSAKFPFNQWGLQPRSLLLQAARGYVV--------RKPAQSRLDDDPPPS 70
Q+L PGL G G+A +P G +PR L L G + PA S LD P P
Sbjct: 259 QLLAPGLCGDGAAVWPAAHAG-RPRQLRLVHGPGLGLLCLGGIQRNPPALSCLDPQPEPP 317
Query: 71 TLLKDYQNVPGIEK 84
L G E+
Sbjct: 318 NLWSSESPAGGRER 331
>gi|29570785 CCCTC-binding factor-like protein [Homo sapiens]
Length = 663
Score = 30.0 bits (66), Expect = 2.1
Identities = 32/162 (19%), Positives = 65/162 (40%), Gaps = 14/162 (8%)
Query: 77 QNVPGIEKVDDVVKRLLSLEMANKKEMLKIKQEQFMK-KIVANPEDTRSLEARI-----I 130
+ + G E+ D++V + + + +++ Q K K N T+ + +
Sbjct: 204 ETMSGDERSDEIVLTVSNSNVEEQEDQPTAGQADAEKAKSTKNQRKTKGAKGTFHCDVCM 263
Query: 131 ALSVKIRSYEEHLEKHRKDKAHKRYLLMSIDQRKKMLKNLRNTNYDVFEKICWGLGIEYT 190
S ++ S+ H++ H +K H +L + + +L+N NT+ C + +
Sbjct: 264 FTSSRMSSFNRHMKTHTSEKPHLCHLCLKTFRTVTLLRNHVNTHTGTRPYKCNDCNMAFV 323
Query: 191 FPPLYYRRAHRRF------VTKKALCIRVFQETQKLKKRRRA 226
R HRR+ K ++C E KLK+ R+
Sbjct: 324 TSGELVR--HRRYKHTHEKPFKCSMCKYASVEASKLKRHVRS 363
>gi|122891870 melanoma inhibitory activity family, member 3 [Homo
sapiens]
Length = 1907
Score = 29.6 bits (65), Expect = 2.7
Identities = 33/149 (22%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 88 VVKRLLSLEMANKKEMLKIKQ-EQFMKKIVANPEDTRSLEARIIALSVKIRSYEEHLEKH 146
+ ++L ++ N + + K+ EQ +K+ + ++TR + ++K + + LEK+
Sbjct: 1216 ISEKLKTIMKENTELVQKLSNYEQKIKESKKHVQETRKQNMILSDEAIKYKDKIKTLEKN 1275
Query: 147 RK--DKAHKRYLLMSIDQRKKMLKN--LRNTNYDVFEKICWGLGI---EYTFPPLYYRRA 199
++ D K +M +R++ +KN L + N EK+ + + E++ + A
Sbjct: 1276 QEILDDTAKNLRVMLESEREQNVKNQDLISENKKSIEKLKDVISMNASEFSEVQIALNEA 1335
Query: 200 HRRFVTKKALCIRVFQETQKLKKRRRALK 228
K+ C RV +E +LKK++ L+
Sbjct: 1336 KLSEEKVKSECHRVQEENARLKKKKEQLQ 1364
>gi|229608967 spermatogenic leucine zipper 1 [Homo sapiens]
Length = 430
Score = 29.6 bits (65), Expect = 2.7
Identities = 20/87 (22%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 77 QNVPGIEKVDDVVKRLLSLEMANKKEMLKIKQEQFM-----KKIVANPEDTRSLEARIIA 131
+N+ G++K+++++ L + +A +KE + KQE + + + A+ E+ R L+
Sbjct: 111 ENIRGLDKINEMLSTNLPVSLAPEKEDNEKKQEMILETNITEDVSAHKENIRGLDKINEM 170
Query: 132 LSVKIRSYEEHLEKHRKDKAHKRYLLM 158
LS + L ++D K+ ++M
Sbjct: 171 LSTNL---PVSLAPEKEDNEKKQQMIM 194
Score = 29.6 bits (65), Expect = 2.7
Identities = 15/52 (28%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 77 QNVPGIEKVDDVVKRLLSLEMANKKEMLKIKQEQFMKKIVANPEDTRSLEAR 128
+N+ G++K+++++ L + +A +KE + KQ+ M+ N E+T + AR
Sbjct: 159 ENIRGLDKINEMLSTNLPVSLAPEKEDNEKKQQMIMEN--QNSENTAQVFAR 208
>gi|32698688 citron [Homo sapiens]
Length = 2027
Score = 29.6 bits (65), Expect = 2.7
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 193 PLYYRRAHRRFVTKKALCIRVFQETQKLKKRRRALKAAAAAQKQAKRRNPDSPAKA 248
PL Y +KA C + + QK + R+ + AA +K +P +PA A
Sbjct: 1255 PLQYNELKLALEKEKARCAELEEALQKTRIELRSAREEAAHRKATDHPHPSTPATA 1310
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,612,023
Number of Sequences: 37866
Number of extensions: 404509
Number of successful extensions: 1885
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 1861
Number of HSP's gapped (non-prelim): 75
length of query: 257
length of database: 18,247,518
effective HSP length: 100
effective length of query: 157
effective length of database: 14,460,918
effective search space: 2270364126
effective search space used: 2270364126
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.