Guide to the Human Genome
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Name: ETFB Sequence: fasta or formatted (346aa) NCBI GI: 62420877
Description:

electron-transfer-flavoprotein, beta polypeptide isoform 2

Referenced in:

Oxidative Phosphorylation

Other entries for this name:
alt prot [255aa] electron-transfer-flavoprotein, beta polypeptide isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         26           1
 C cysteine            1.7          6           1
 D aspartate           5.8         20           3
 E glutamate           6.9         24           2
 F phenylalanine       1.4          5           1
 G glycine             7.8         27           2
 H histidine           0.6          2           1
 I isoleucine          4.6         16           1
 K lysine              6.9         24           4
 L leucine            11.6         40           2
 M methionine          1.7          6           1
 N asparagine          2.6          9           1
 P proline             8.7         30           3
 Q glutamine           4.3         15           1
 R arginine            5.8         20           3
 S serine              3.8         13           1
 T threonine           6.6         23           2
 V valine             10.1         35           3
 W tryptophan          0.9          3           1
 Y tyrosine            0.6          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   electron-transfer-flavoprotein, beta polypeptide iso... 
ETFB                  0.659   electron-transfer-flavoprotein, beta polypeptide isof...
LOC642515             0.020   PREDICTED: similar to NG5 protein 
LOC642515             0.020   PREDICTED: similar to NG5 protein 
SLC10A4               0.018   solute carrier family 10, member 4 
RBM26                 0.018   RNA binding motif protein 26 
LOC100133915          0.015   PREDICTED: hypothetical protein 
PPP1R13B              0.015   apoptosis-stimulating protein of p53, 1 
PYGO2                 0.015   pygopus homolog 2 
LOC100291533          0.014   PREDICTED: hypothetical protein XP_002347080 
LOC100288002          0.014   PREDICTED: hypothetical protein XP_002342946 
HDAC7                 0.012   histone deacetylase 7 isoform d 
HDAC7                 0.012   histone deacetylase 7 isoform a 
MLL4                  0.012   myeloid/lymphoid or mixed-lineage leukemia 4 
NACA                  0.012   nascent polypeptide-associated complex alpha subuni...
EPS8L1                0.012   epidermal growth factor receptor pathway substrate ...
EPS8L1                0.012   epidermal growth factor receptor pathway substrate ...
TET3                  0.011   tet oncogene family member 3 
ZNF48                 0.011   zinc finger protein 48 
RNF44                 0.011   ring finger protein 44 
ZFHX2                 0.011   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.011   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.011   PREDICTED: zinc finger homeobox 2 
SRCAP                 0.011   Snf2-related CBP activator protein 
LOC100287250          0.011   PREDICTED: hypothetical protein XP_002344493 
DNM3                  0.011   dynamin 3 isoform a 
DNM3                  0.011   dynamin 3 isoform b 
TSPYL1                0.011   TSPY-like 1 
CAMK2G                0.009   calcium/calmodulin-dependent protein kinase II gamma...
FUSSEL18              0.009   PREDICTED: functional smad suppressing element 18 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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