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Search of human proteins with 16519559
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|16519559 tripartite motif protein 9 isoform 2 [Homo sapiens]
(550 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|16519559 tripartite motif protein 9 isoform 2 [Homo sapiens] 1137 0.0
gi|190341104 tripartite motif protein 9 isoform 1 [Homo sapiens] 1105 0.0
gi|134288906 tripartite motif-containing 67 [Homo sapiens] 692 0.0
gi|62865606 tripartite motif-containing 36 isoform 1 [Homo sapiens] 190 3e-48
gi|47174859 tripartite motif-containing 46 [Homo sapiens] 171 1e-42
gi|223890259 midline 2 isoform 2 [Homo sapiens] 163 3e-40
gi|223890257 midline 2 isoform 1 [Homo sapiens] 159 5e-39
gi|148833499 midline 1 [Homo sapiens] 149 8e-36
gi|4557753 midline 1 [Homo sapiens] 149 8e-36
gi|15451852 midline 1 [Homo sapiens] 149 8e-36
gi|78482626 ring finger protein 30 isoform 2 [Homo sapiens] 91 3e-18
gi|19924163 muscle specific ring finger protein 1 [Homo sapiens] 86 7e-17
gi|89886468 fibronectin type III and SPRY domain containing 1-li... 82 1e-15
gi|223718222 fibronectin type III and SPRY domain containing 1-l... 82 1e-15
gi|124487387 ring finger protein 207 [Homo sapiens] 81 3e-15
gi|13236585 fibronectin type III and SPRY domain containing 1 [H... 76 9e-14
gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens] 75 2e-13
gi|34878844 tripartite motif-containing 55 isoform 3 [Homo sapiens] 70 5e-12
gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens] 70 5e-12
gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens] 70 5e-12
gi|54792146 tripartite motif-containing 47 [Homo sapiens] 69 1e-11
gi|52487176 tripartite motif-containing 37 protein [Homo sapiens] 65 2e-10
gi|15147333 tripartite motif-containing 37 protein [Homo sapiens] 65 2e-10
gi|55741632 fibronectin type III and SPRY domain containing 2 [H... 65 2e-10
gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens] 63 6e-10
gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens] 63 6e-10
gi|15208643 ADP-ribosylation factor domain protein 1 isoform gam... 62 1e-09
gi|15208641 ADP-ribosylation factor domain protein 1 isoform bet... 62 1e-09
gi|4502197 ADP-ribosylation factor domain protein 1 isoform alph... 62 1e-09
gi|62241003 cardiomyopathy associated 5 [Homo sapiens] 60 4e-09
>gi|16519559 tripartite motif protein 9 isoform 2 [Homo sapiens]
Length = 550
Score = 1137 bits (2940), Expect = 0.0
Identities = 550/550 (100%), Positives = 550/550 (100%)
Query: 1 MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSHRAAGSGVSDY 60
MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSHRAAGSGVSDY
Sbjct: 1 MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSHRAAGSGVSDY 60
Query: 61 DYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPATHLSPALAPV 120
DYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPATHLSPALAPV
Sbjct: 61 DYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPATHLSPALAPV 120
Query: 121 PRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATV 180
PRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATV
Sbjct: 121 PRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATV 180
Query: 181 MCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMY 240
MCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMY
Sbjct: 181 MCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMY 240
Query: 241 CVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRN 300
CVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRN
Sbjct: 241 CVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRN 300
Query: 301 MVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKL 360
MVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKL
Sbjct: 301 MVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKL 360
Query: 361 RQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNS 420
RQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNS
Sbjct: 361 RQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNS 420
Query: 421 PLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELD 480
PLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELD
Sbjct: 421 PLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELD 480
Query: 481 DGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGKALQQ 540
DGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGKALQQ
Sbjct: 481 DGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGKALQQ 540
Query: 541 YPSERELRGI 550
YPSERELRGI
Sbjct: 541 YPSERELRGI 550
>gi|190341104 tripartite motif protein 9 isoform 1 [Homo sapiens]
Length = 710
Score = 1105 bits (2859), Expect = 0.0
Identities = 534/534 (100%), Positives = 534/534 (100%)
Query: 1 MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSHRAAGSGVSDY 60
MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSHRAAGSGVSDY
Sbjct: 1 MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSHRAAGSGVSDY 60
Query: 61 DYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPATHLSPALAPV 120
DYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPATHLSPALAPV
Sbjct: 61 DYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPATHLSPALAPV 120
Query: 121 PRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATV 180
PRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATV
Sbjct: 121 PRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATV 180
Query: 181 MCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMY 240
MCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMY
Sbjct: 181 MCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMY 240
Query: 241 CVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRN 300
CVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRN
Sbjct: 241 CVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRN 300
Query: 301 MVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKL 360
MVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKL
Sbjct: 301 MVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKL 360
Query: 361 RQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNS 420
RQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNS
Sbjct: 361 RQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNS 420
Query: 421 PLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELD 480
PLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELD
Sbjct: 421 PLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELD 480
Query: 481 DGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSE 534
DGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSE
Sbjct: 481 DGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSE 534
>gi|134288906 tripartite motif-containing 67 [Homo sapiens]
Length = 783
Score = 692 bits (1785), Expect = 0.0
Identities = 359/616 (58%), Positives = 425/616 (68%), Gaps = 95/616 (15%)
Query: 4 MEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESES--PQ------------- 48
MEEELKCPVCGS +REPIILPCSHN+C CAR I VQTP+ E PQ
Sbjct: 1 MEEELKCPVCGSLFREPIILPCSHNVCLPCARTIAVQTPDGEQHLPQPLLLSRGSGLQAG 60
Query: 49 -------SHRAA------GSGVSDYDYLD---------LDKMSLYSEADSGYGSYGGFAS 86
H AA G+G S L DK+SLYSE DSGYGSY
Sbjct: 61 AAAAASLEHDAAAGPACGGAGGSAAGGLGGGAGGGGDHADKLSLYSETDSGYGSY----- 115
Query: 87 APTTPCQKSPNGVRVFPPAMPPPATHLSPALAPV-----PRNSCITCPQCHRSLILDDRG 141
TP KSPNGVRV P PP + + A +S ITCPQCHRS LD RG
Sbjct: 116 ---TPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSLSSSSSSITCPQCHRSASLDHRG 172
Query: 142 LRGFPKNRVLEGVIDRYQQSK---------AAALKCQLCEKAPKE-ATVMCEQCDVFYCD 191
LRGF +NR+LE ++ RYQQ + AA CQLC++ P E A +CEQCDV YC
Sbjct: 173 LRGFQRNRLLEAIVQRYQQGRGAVPGTSAAAAVAICQLCDRTPPEPAATLCEQCDVLYCS 232
Query: 192 PCRLRCHPPRGPLAKHRLVPP-----------------AQGRVSRR-------------- 220
C+L+CHP RGP AKHRLV P AQG S
Sbjct: 233 ACQLKCHPSRGPFAKHRLVQPPPPPPPPAEAASGPTGTAQGAPSGGGGCKSPGGAGAGAT 292
Query: 221 --LSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLS 278
+ RK TC +HE+EN+SMYCV C+ PVCY CLEEG+H+ HEVK LGAMWK HK+QLS
Sbjct: 293 GGSTARKFPTCPEHEMENYSMYCVSCRTPVCYLCLEEGRHAKHEVKPLGAMWKQHKAQLS 352
Query: 279 QALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARV 338
QALNG+SD+AKEAKEFLVQL+N++QQIQEN +++EACLVAQCDAL+DAL R+KA+LL +V
Sbjct: 353 QALNGVSDKAKEAKEFLVQLKNILQQIQENGLDYEACLVAQCDALVDALTRQKAKLLTKV 412
Query: 339 NKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTED 398
KE EHKLK+V DQI+HCT+KLRQ+TGLMEYCLEVIKENDPSGFLQISDALI+RV ++++
Sbjct: 413 TKEREHKLKMVWDQINHCTLKLRQSTGLMEYCLEVIKENDPSGFLQISDALIKRVQVSQE 472
Query: 399 QWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSA 458
QW KG L P+++ +FDL+LD+ PLLQ+IHQLDF+Q+K VP P+LQLE+CCT NNS
Sbjct: 473 QWVKGALEPKVSAEFDLTLDSEPLLQAIHQLDFIQMKCR--VPPVPLLQLEKCCTRNNSV 530
Query: 459 TLSWKQPPLSTVPADGYILELDDGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNK 518
TL+W+ PP + P DGYILELDDG GGQFREVYVGKET+CT+DGLHFNSTYNARVKAFN
Sbjct: 531 TLAWRMPPFTHSPVDGYILELDDGAGGQFREVYVGKETLCTIDGLHFNSTYNARVKAFNS 590
Query: 519 TGVSPYSKTLVLQTSE 534
+GV PYSKT+VLQTS+
Sbjct: 591 SGVGPYSKTVVLQTSD 606
>gi|62865606 tripartite motif-containing 36 isoform 1 [Homo sapiens]
Length = 728
Score = 190 bits (482), Expect = 3e-48
Identities = 142/542 (26%), Positives = 245/542 (45%), Gaps = 68/542 (12%)
Query: 1 MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSHRAAGSGVSDY 60
++ +E EL CP C + P+ILPC H++C C + +L+
Sbjct: 24 IKNIERELICPACKELFTHPLILPCQHSICHKCVKELLLTL------------------- 64
Query: 61 DYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPATHLSPAL--- 117
D + G S ++P + P+ P+M P
Sbjct: 65 --------------DDSFNDVGSDNSNQSSPRLRLPS------PSMDKIDRINRPGWKRN 104
Query: 118 APVPRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSK--AAALKCQLCEKAP 175
+ PR + CP C + L +RG+ G +N LE +++RY+Q+ A A+ C LC+ P
Sbjct: 105 SLTPRTTVFPCPGCEHDVDLGERGINGLFRNFTLETIVERYRQAARAATAIMCDLCKPPP 164
Query: 176 KEATVMCEQCDVFYCDPCRLRCHPPRGPL-AKHRLVPPAQGRVSRRLSPRKVSTCTDHEL 234
+E+T C C YC+ C + H P G + A+H V P + P K+ C +HE
Sbjct: 165 QESTKSCMDCSASYCNEC-FKIHHPWGTIKAQHEYVGP-----TTNFRP-KILMCPEHET 217
Query: 235 ENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEF 294
E +MYC C+ PVC+ C G H++H V + + +K K +LS+ ++ L + + K
Sbjct: 218 ERINMYCELCRRPVCHLCKLGGNHANHRVTTMSSAYKTLKEKLSKDIDYLIGKESQVKSQ 277
Query: 295 LVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQIS 354
+ +L ++++ + N + + + L + L RK+ +L ++ + +L + Q+
Sbjct: 278 ISELNLLMKETECNGERAKEEAITHFEKLFEVLEERKSSVLKAIDSSKKLRLDKFQTQME 337
Query: 355 HCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDF- 413
L + GL+ Y EV+KE D S F+Q + L R+ + + P T F
Sbjct: 338 EYQ-GLLENNGLVGYAQEVLKETDQSCFVQTAKQLHLRIQKATE--SLKSFRPAAQTSFE 394
Query: 414 DLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVPAD 473
D ++ S + + +L F SS + P + E+ +NN A ++W P AD
Sbjct: 395 DYVVNTSKQTELLGELSFF----SSGID-VPEINEEQSKVYNN-ALINWHHPEKD--KAD 446
Query: 474 GYILE---LDDGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVL 530
Y+LE ++ + + E+ V T + L +STY RV+A+ + SP S+ L+L
Sbjct: 447 SYVLEYRKINRDDEMSWNEIEV-CGTSKIIQDLENSSTYAFRVRAYKGSICSPCSRELIL 505
Query: 531 QT 532
T
Sbjct: 506 HT 507
>gi|47174859 tripartite motif-containing 46 [Homo sapiens]
Length = 759
Score = 171 bits (434), Expect = 1e-42
Identities = 156/573 (27%), Positives = 243/573 (42%), Gaps = 86/573 (15%)
Query: 1 MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQ--------TPESE------- 45
M+ ME+EL CPVC Y++P++LPC+HN+CQACAR +L Q P SE
Sbjct: 24 MKNMEKELLCPVCQEMYKQPLVLPCTHNVCQACAREVLGQQGYIGHGGDPSSEPTSPAST 83
Query: 46 -SPQSHRAAGSGVSDYDYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPP 104
S +S R + + D LD SG+G+Y G P V +FP
Sbjct: 84 PSTRSPRLSRRTLPKPDRLD-------RLLKSGFGTYPGRKRGALHP------QVIMFP- 129
Query: 105 AMPPPATHLSPALAPVPRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKA- 163
CP C + L +RGL G +N LE V++RY+QS +
Sbjct: 130 -----------------------CPACQGDVELGERGLAGLFRNLTLERVVERYRQSVSV 166
Query: 164 -AALKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLS 222
A+ CQLC+ P EAT C +C +C+ C HP A+H P LS
Sbjct: 167 GGAILCQLCKPPPLEATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPT-------LS 219
Query: 223 PR-KVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQAL 281
R K C DH+ E + YC C+ VC C HS H++ + + ++ K +L+++L
Sbjct: 220 FRPKGLMCPDHK-EEVTHYCKTCQRLVCQLCRVRRTHSGHKITPVLSAYQALKDKLTKSL 278
Query: 282 NGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKE 341
+ + + +L V+ + + + + + L L ++A LL + +
Sbjct: 279 TYILGNQDTVQTQICELEEAVRHTEVSGQQAKEEVSQLVRGLGAVLEEKRASLLQAIEEC 338
Query: 342 HEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWG 401
+ +L + QI L +GL+ Y EV+KE D F+Q + L R+ +
Sbjct: 339 QQERLARLSAQIQEHR-SLLDGSGLVGYAQEVLKETDQPCFVQAAKQLHNRIARATE--A 395
Query: 402 KGTLTPRMTTDF-DLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATL 460
T P ++ F LD ++ + +L+F++ VP P++ + + + L
Sbjct: 396 LQTFRPAASSSFRHCQLDVGREMKLLTELNFLR------VPEAPVIDTQRTFAY-DQIFL 448
Query: 461 SWKQPPLSTVPADGYILEL--------DDGNGGQFREVYVGKETMCTVDGLHFNSTYNAR 512
W+ PP S PA Y +E Q RE G T ++ S Y R
Sbjct: 449 CWRLPPHSP-PAWHYTVEFRRTDVPAQPGPTRWQRREEVRG--TSALLENPDTGSVYVLR 505
Query: 513 VKAFNKTGVSPYSKTLVLQTSEGKALQQYPSER 545
V+ NK G YS+ + L T L + R
Sbjct: 506 VRGCNKAGYGEYSEDVHLHTPPAPVLHFFLDSR 538
>gi|223890259 midline 2 isoform 2 [Homo sapiens]
Length = 705
Score = 163 bits (413), Expect = 3e-40
Identities = 120/459 (26%), Positives = 201/459 (43%), Gaps = 54/459 (11%)
Query: 128 CPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAA---------------------- 165
CP C + L+ RGL G +N L+ +IDR+Q++ +
Sbjct: 76 CPTCRYVISLNHRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSESRRERTYRPTTAMSSE 135
Query: 166 -LKCQLCEK-APKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSP 223
+ CQ CE+ P++A C C+V YCD C HP + P HRLV P R +
Sbjct: 136 RIACQFCEQDPPRDAVKTCITCEVSYCDRCLRATHPNKKPFTSHRLVEPVPDTHLRGI-- 193
Query: 224 RKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNG 283
TC DHE E +MYCV +C C G+H H+V +L ++ K L L
Sbjct: 194 ----TCLDHENEKVNMYCVSDDQLICALCKLVGRHRDHQVASLNDRFEKLKQTLEMNLTN 249
Query: 284 LSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHE 343
L R E + + +L + QQ++ N+ EA L+ +CD L++ + +RK + ++ +
Sbjct: 250 LVKRNSELENQMAKLIQICQQVEVNTAMHEAKLMEECDELVEIIQQRKQMIAVKIKETKV 309
Query: 344 HKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKG 403
KL+ + Q+++C L ++T L+ ++KEND + FLQ + + RV +
Sbjct: 310 MKLRKLAQQVANCRQCLERSTVLINQAEHILKENDQARFLQSAKNIAERVAMATA--SSQ 367
Query: 404 TLTPRMTTD---FDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATL 460
L P + + + +LD S + + LD++ P P ++ E C +++ T+
Sbjct: 368 VLIPDINFNDAFENFALDFSREKKLLEGLDYL------TAPNPPSIREELCTASHDTITV 421
Query: 461 SWKQPPLSTVPADGYILELDDGNG-GQFREVYVG----------KETMCTVDGLHFNSTY 509
W ++ Y L+ G F +Y K+ TV GL + Y
Sbjct: 422 HWISDDEFSI--SSYELQYTIFTGQANFISLYNSVDSWMIVPNIKQNHYTVHGLQSGTRY 479
Query: 510 NARVKAFNKTGVSPYSKTLVLQTSEGKALQQYPSERELR 548
VKA N+ G T + S+ L + ++L+
Sbjct: 480 IFIVKAINQAGSRNSEPTRLKTNSQPFKLDPKMTHKKLK 518
>gi|223890257 midline 2 isoform 1 [Homo sapiens]
Length = 735
Score = 159 bits (403), Expect = 5e-39
Identities = 100/362 (27%), Positives = 168/362 (46%), Gaps = 41/362 (11%)
Query: 128 CPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAA---------------------- 165
CP C + L+ RGL G +N L+ +IDR+Q++ +
Sbjct: 76 CPTCRYVISLNHRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSESRRERTYRPTTAMSSE 135
Query: 166 -LKCQLCEK-APKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSP 223
+ CQ CE+ P++A C C+V YCD C HP + P HRLV P R +
Sbjct: 136 RIACQFCEQDPPRDAVKTCITCEVSYCDRCLRATHPNKKPFTSHRLVEPVPDTHLRGI-- 193
Query: 224 RKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNG 283
TC DHE E +MYCV +C C G+H H+V +L ++ K L L
Sbjct: 194 ----TCLDHENEKVNMYCVSDDQLICALCKLVGRHRDHQVASLNDRFEKLKQTLEMNLTN 249
Query: 284 LSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHE 343
L R E + + +L + QQ++ N+ EA L+ +CD L++ + +RK + ++ +
Sbjct: 250 LVKRNSELENQMAKLIQICQQVEVNTAMHEAKLMEECDELVEIIQQRKQMIAVKIKETKV 309
Query: 344 HKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKG 403
KL+ + Q+++C L ++T L+ ++KEND + FLQ + + RV +
Sbjct: 310 MKLRKLAQQVANCRQCLERSTVLINQAEHILKENDQARFLQSAKNIAERVAMATA--SSQ 367
Query: 404 TLTPRMTTD---FDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATL 460
L P + + + +LD S + + LD++ P P ++ E C +++ T+
Sbjct: 368 VLIPDINFNDAFENFALDFSREKKLLEGLDYL------TAPNPPSIREELCTASHDTITV 421
Query: 461 SW 462
W
Sbjct: 422 HW 423
>gi|148833499 midline 1 [Homo sapiens]
Length = 667
Score = 149 bits (375), Expect = 8e-36
Identities = 113/429 (26%), Positives = 182/429 (42%), Gaps = 50/429 (11%)
Query: 128 CPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSK-----------------------AA 164
CP C + L RGL G +N L+ +IDR+Q++ A
Sbjct: 56 CPTCRHVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAE 115
Query: 165 ALKCQLCEKAP-KEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSP 223
+ CQ C++ P ++A C C+V YCD C HP + P HRL+ P R L
Sbjct: 116 KVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLM- 174
Query: 224 RKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNG 283
C +HE E +MYCV +C C G+H H+V AL + K L L
Sbjct: 175 -----CLEHEDEKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTN 229
Query: 284 LSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHE 343
L R E + L +L Q ++ N+ EA L +CD LI+ + +R+ + ++ +
Sbjct: 230 LIKRNTELETLLAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQRRQIIGTKIKEGKV 289
Query: 344 HKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKG 403
+L+ + QI++C + ++ L+ +KEND + FLQ + + RV +
Sbjct: 290 MRLRKLAQQIANCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATA--SSQ 347
Query: 404 TLTPRMTTD--FD-LSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATL 460
L P + + FD +LD S + + LD++ P P ++ E C ++ T+
Sbjct: 348 VLIPEINLNDTFDTFALDFSREKKLLECLDYL------TAPNPPTIREELCTASYDTITV 401
Query: 461 SWKQPPLSTVPADGYILELDDG---------NGGQFREVYVGKETMCTVDGLHFNSTYNA 511
W +V + + G + + V K+ TV GL + Y
Sbjct: 402 HWTSDDEFSVVSYELQYTIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIF 461
Query: 512 RVKAFNKTG 520
VKA N+ G
Sbjct: 462 MVKAINQAG 470
>gi|4557753 midline 1 [Homo sapiens]
Length = 667
Score = 149 bits (375), Expect = 8e-36
Identities = 113/429 (26%), Positives = 182/429 (42%), Gaps = 50/429 (11%)
Query: 128 CPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSK-----------------------AA 164
CP C + L RGL G +N L+ +IDR+Q++ A
Sbjct: 56 CPTCRHVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAE 115
Query: 165 ALKCQLCEKAP-KEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSP 223
+ CQ C++ P ++A C C+V YCD C HP + P HRL+ P R L
Sbjct: 116 KVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLM- 174
Query: 224 RKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNG 283
C +HE E +MYCV +C C G+H H+V AL + K L L
Sbjct: 175 -----CLEHEDEKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTN 229
Query: 284 LSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHE 343
L R E + L +L Q ++ N+ EA L +CD LI+ + +R+ + ++ +
Sbjct: 230 LIKRNTELETLLAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQRRQIIGTKIKEGKV 289
Query: 344 HKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKG 403
+L+ + QI++C + ++ L+ +KEND + FLQ + + RV +
Sbjct: 290 MRLRKLAQQIANCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATA--SSQ 347
Query: 404 TLTPRMTTD--FD-LSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATL 460
L P + + FD +LD S + + LD++ P P ++ E C ++ T+
Sbjct: 348 VLIPEINLNDTFDTFALDFSREKKLLECLDYL------TAPNPPTIREELCTASYDTITV 401
Query: 461 SWKQPPLSTVPADGYILELDDG---------NGGQFREVYVGKETMCTVDGLHFNSTYNA 511
W +V + + G + + V K+ TV GL + Y
Sbjct: 402 HWTSDDEFSVVSYELQYTIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIF 461
Query: 512 RVKAFNKTG 520
VKA N+ G
Sbjct: 462 MVKAINQAG 470
>gi|15451852 midline 1 [Homo sapiens]
Length = 667
Score = 149 bits (375), Expect = 8e-36
Identities = 113/429 (26%), Positives = 182/429 (42%), Gaps = 50/429 (11%)
Query: 128 CPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSK-----------------------AA 164
CP C + L RGL G +N L+ +IDR+Q++ A
Sbjct: 56 CPTCRHVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAE 115
Query: 165 ALKCQLCEKAP-KEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSP 223
+ CQ C++ P ++A C C+V YCD C HP + P HRL+ P R L
Sbjct: 116 KVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLM- 174
Query: 224 RKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNG 283
C +HE E +MYCV +C C G+H H+V AL + K L L
Sbjct: 175 -----CLEHEDEKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTN 229
Query: 284 LSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHE 343
L R E + L +L Q ++ N+ EA L +CD LI+ + +R+ + ++ +
Sbjct: 230 LIKRNTELETLLAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQRRQIIGTKIKEGKV 289
Query: 344 HKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKG 403
+L+ + QI++C + ++ L+ +KEND + FLQ + + RV +
Sbjct: 290 MRLRKLAQQIANCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATA--SSQ 347
Query: 404 TLTPRMTTD--FD-LSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATL 460
L P + + FD +LD S + + LD++ P P ++ E C ++ T+
Sbjct: 348 VLIPEINLNDTFDTFALDFSREKKLLECLDYL------TAPNPPTIREELCTASYDTITV 401
Query: 461 SWKQPPLSTVPADGYILELDDG---------NGGQFREVYVGKETMCTVDGLHFNSTYNA 511
W +V + + G + + V K+ TV GL + Y
Sbjct: 402 HWTSDDEFSVVSYELQYTIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIF 461
Query: 512 RVKAFNKTG 520
VKA N+ G
Sbjct: 462 MVKAINQAG 470
>gi|78482626 ring finger protein 30 isoform 2 [Homo sapiens]
Length = 358
Score = 90.9 bits (224), Expect = 3e-18
Identities = 64/266 (24%), Positives = 110/266 (41%), Gaps = 53/266 (19%)
Query: 128 CPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDV 187
CP C ++LD G+ G +N ++E +ID Y+Q +
Sbjct: 78 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSR----------------------- 114
Query: 188 FYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMP 247
P + + L C +HE E ++YC+ C++P
Sbjct: 115 ------------------------PLHSKAEQHLM------CEEHEEEKINIYCLSCEVP 144
Query: 248 VCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQE 307
C C G H EV L ++K KS+LS + L + + Q+ + Q I++
Sbjct: 145 TCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGNDRVQAVITQMEEVCQTIED 204
Query: 308 NSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLM 367
NS + L + ++L L RK +LL + +E E KL+ VR I L ++ L+
Sbjct: 205 NSRRQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQRVRGLIRQYGDHLEASSKLV 264
Query: 368 EYCLEVIKENDPSGFLQISDALIRRV 393
E ++ ++E + +LQ + LI +V
Sbjct: 265 ESAIQSMEEPQMALYLQQAKELINKV 290
Score = 47.4 bits (111), Expect = 3e-05
Identities = 17/38 (44%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 1 MEEMEEELKCPVCGSFYREPI-ILPCSHNLCQACARNI 37
M+ +E++L CP+C + +P+ ILPC HNLC+ CA ++
Sbjct: 17 MDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDV 54
>gi|19924163 muscle specific ring finger protein 1 [Homo sapiens]
Length = 353
Score = 86.3 bits (212), Expect = 7e-17
Identities = 61/266 (22%), Positives = 113/266 (42%), Gaps = 54/266 (20%)
Query: 128 CPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDV 187
CP C +I+D G+ G +N ++E +ID Y+ ++C
Sbjct: 75 CPTCRHEVIMDRHGVYGLQRNLLVENIIDIYK-----------------------QECS- 110
Query: 188 FYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMP 247
SR L C +HE E ++YC+ C++P
Sbjct: 111 ------------------------------SRPLQKGSHPMCKEHEDEKINIYCLTCEVP 140
Query: 248 VCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQE 307
C C G H + EV L ++++ K++L+ ++ L + + QL + + +E
Sbjct: 141 TCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGNDRVQTIITQLEDSRRVTKE 200
Query: 308 NSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLM 367
NS + + L + D L L+ +K++LL R+ +E E KL + I +L ++T L+
Sbjct: 201 NSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLSFIEALIQQYQEQLDKSTKLV 260
Query: 368 EYCLEVIKENDPSGFLQISDALIRRV 393
E ++ + E + FL + LI+ +
Sbjct: 261 ETAIQSLDEPGGATFLLTAKQLIKSI 286
Score = 48.9 bits (115), Expect = 1e-05
Identities = 19/38 (50%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 1 MEEMEEELKCPVCGSFYREPI-ILPCSHNLCQACARNI 37
ME +E++L CP+C + +P+ ILPC HNLC+ CA +I
Sbjct: 14 MENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDI 51
>gi|89886468 fibronectin type III and SPRY domain containing 1-like
isoform 1 [Homo sapiens]
Length = 498
Score = 82.4 bits (202), Expect = 1e-15
Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 20/270 (7%)
Query: 274 KSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRKAQ 333
K L + ++ L+++ E + F+ L + ++ +QENS + L + D+L L+ K
Sbjct: 5 KEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEVKES 64
Query: 334 LLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRV 393
++ + +E K + ++ QIS C L + L+E+ + +P F + + + RV
Sbjct: 65 MINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKAARQIKDRV 124
Query: 394 HLTEDQWGKGTLTPRMTTDF-DLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECC 452
T + +L P+++ + L +D S Q + L F+ PVP P + EC
Sbjct: 125 --TMASAFRLSLKPKVSDNMTHLMVDFSQERQMLQTLKFL------PVPKAPEIDPVECL 176
Query: 453 THNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVYVG---------KETMCTVDGL 503
+NS T++W+ P D +ILE N V K T T+ GL
Sbjct: 177 VADNSVTVAWRMPEEDN-KIDHFILEHRKTNFDGLPRVKDERCWEIIDNIKGTEYTLSGL 235
Query: 504 HFNSTY-NARVKAFNKTGVSPYSKTLVLQT 532
F+S Y N RV+A NK YS + L+T
Sbjct: 236 KFDSKYMNFRVRACNKAVAGEYSDPVTLET 265
>gi|223718222 fibronectin type III and SPRY domain containing 1-like
isoform 3 [Homo sapiens]
Length = 530
Score = 82.4 bits (202), Expect = 1e-15
Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 20/272 (7%)
Query: 272 LHKSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRK 331
L + L + ++ L+++ E + F+ L + ++ +QENS + L + D+L L+ K
Sbjct: 35 LQQEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEVK 94
Query: 332 AQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIR 391
++ + +E K + ++ QIS C L + L+E+ + +P F + + +
Sbjct: 95 ESMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKAARQIKD 154
Query: 392 RVHLTEDQWGKGTLTPRMTTDF-DLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEE 450
RV T + +L P+++ + L +D S Q + L F+ PVP P + E
Sbjct: 155 RV--TMASAFRLSLKPKVSDNMTHLMVDFSQERQMLQTLKFL------PVPKAPEIDPVE 206
Query: 451 CCTHNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVYVG---------KETMCTVD 501
C +NS T++W+ P D +ILE N V K T T+
Sbjct: 207 CLVADNSVTVAWRMPEEDN-KIDHFILEHRKTNFDGLPRVKDERCWEIIDNIKGTEYTLS 265
Query: 502 GLHFNSTY-NARVKAFNKTGVSPYSKTLVLQT 532
GL F+S Y N RV+A NK YS + L+T
Sbjct: 266 GLKFDSKYMNFRVRACNKAVAGEYSDPVTLET 297
>gi|124487387 ring finger protein 207 [Homo sapiens]
Length = 634
Score = 80.9 bits (198), Expect = 3e-15
Identities = 73/273 (26%), Positives = 123/273 (45%), Gaps = 15/273 (5%)
Query: 126 ITCPQCHRSLILDDRGLRGFPK-NRVLEGVIDRYQQSKAAA--LKCQL-CEKAPKEATVM 181
+TCP C +L +G G P +R+L+ ++D A C L C + E T
Sbjct: 58 LTCPLCQHQTVL--KGPSGLPPVDRLLQFLVDSSGDGVEAVRCANCDLECSEQDVETTYF 115
Query: 182 CEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYC 241
C C C CR H R A+H +V A G+ SR + P+K CT H E + ++
Sbjct: 116 CNTCGQPLCARCRDETHRAR-MFARHDIV--ALGQRSRDV-PQK---CTLHA-EPYLLFS 167
Query: 242 VQCKMPVCYQCLEE-GKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRN 300
K+ +C +C + K S L + + +L QA+ + +E + L+
Sbjct: 168 TDKKLLLCIRCFRDMQKESRAHCVDLESAYVQGCERLEQAVLAVKALQTATREAIALLQA 227
Query: 301 MVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKL 360
MV++++ ++ E E + A ++ D L RKA LL V ++E K K ++Q+SH L
Sbjct: 228 MVEEVRHSAAEEEDAIHALFGSMQDRLAERKALLLQAVQSQYEEKDKAFKEQLSHLATLL 287
Query: 361 RQTTGLMEYCLEVIKENDPSGFLQISDALIRRV 393
+ C + + + FL + L+ R+
Sbjct: 288 PTLQVHLVICSSFLSLANKAEFLDLGYELMERL 320
Score = 33.9 bits (76), Expect = 0.40
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 8 LKCPVCGSFYREPIILPCSHNLCQACAR 35
L CP+C Y P +L C H+ C C R
Sbjct: 23 LVCPLCHVQYERPCLLDCFHDFCAGCLR 50
>gi|13236585 fibronectin type III and SPRY domain containing 1 [Homo
sapiens]
Length = 496
Score = 75.9 bits (185), Expect = 9e-14
Identities = 67/272 (24%), Positives = 123/272 (45%), Gaps = 24/272 (8%)
Query: 274 KSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRKAQ 333
+ L + + L+ + +E + F+ L+ M+ ++ NS + + L A+ +L L K
Sbjct: 5 REALRKIIKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEELKEG 64
Query: 334 LLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRV 393
+L ++ ++ + +++Q++ CT L + L+E + ++ D F Q + + V
Sbjct: 65 MLMKIKQDRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAKQIKDGV 124
Query: 394 HLTEDQWGKGTLTP--RMTTDFDLSLDNSPLLQSIHQ-LDFVQVKASSPVPATPILQLEE 450
T+ P R++ +S + S L+ Q +Q PVP+ P++ L E
Sbjct: 125 ----------TMAPAFRLSLKAKVSDNMSHLMVDFAQERQMLQALKFLPVPSAPVIDLAE 174
Query: 451 CCTHNNSATLSWKQPPLSTVPADGYILELDDGN--------GGQFREVYVG-KETMCTVD 501
+N TL W+ P + D Y+LE N Q V G ++T T+
Sbjct: 175 SLVADNCVTLVWRMPDEDS-KIDHYVLEYRRTNFEGPPRLKEDQPWMVIEGIRQTEYTLT 233
Query: 502 GLHFNSTY-NARVKAFNKTGVSPYSKTLVLQT 532
GL F+ Y N RVKA NK +S+ + L+T
Sbjct: 234 GLKFDMKYMNFRVKACNKAVAGEFSEPVTLET 265
>gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens]
Length = 400
Score = 74.7 bits (182), Expect = 2e-13
Identities = 64/272 (23%), Positives = 115/272 (42%), Gaps = 23/272 (8%)
Query: 128 CPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQ-----LCEKAPKE-ATVM 181
CP C ++LD G+ G +N ++E +ID Y+Q + L + +CE+ +E +
Sbjct: 78 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLMCEEHEEEKINIY 137
Query: 182 CEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYC 241
C C+V C C++ +A + Q + L PR
Sbjct: 138 CLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKKQDLTLLPR----------------- 180
Query: 242 VQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRNM 301
++C C + SS K+ S+LS + L + + Q+ +
Sbjct: 181 LECSGTNTTYCSLDLPSSSDPPILASQNTKIIDSELSDGIAMLVAGNDRVQAVITQMEEV 240
Query: 302 VQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLR 361
Q I++NS + L + ++L L RK +LL + +E E KL+ VR I L
Sbjct: 241 CQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQRVRGLIRQYGDHLE 300
Query: 362 QTTGLMEYCLEVIKENDPSGFLQISDALIRRV 393
++ L+E ++ ++E + +LQ + LI +V
Sbjct: 301 ASSKLVESAIQSMEEPQMALYLQQAKELINKV 332
Score = 47.4 bits (111), Expect = 3e-05
Identities = 17/38 (44%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 1 MEEMEEELKCPVCGSFYREPI-ILPCSHNLCQACARNI 37
M+ +E++L CP+C + +P+ ILPC HNLC+ CA ++
Sbjct: 17 MDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDV 54
>gi|34878844 tripartite motif-containing 55 isoform 3 [Homo sapiens]
Length = 452
Score = 70.1 bits (170), Expect = 5e-12
Identities = 43/165 (26%), Positives = 81/165 (49%)
Query: 229 CTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRA 288
C +HE E ++YC+ C++P C C G H +V L +++ KS+LS + L
Sbjct: 124 CEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGSN 183
Query: 289 KEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKV 348
+ + QL + + I+E + + L + D L L RK ++ + + E KL+
Sbjct: 184 DRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQEEKLEH 243
Query: 349 VRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRV 393
VR I + L + L+E ++ + E + + FLQ + L++++
Sbjct: 244 VRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKI 288
Score = 47.4 bits (111), Expect = 3e-05
Identities = 18/38 (47%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 1 MEEMEEELKCPVCGSFYREPI-ILPCSHNLCQACARNI 37
M+ +E++L CP+C + +P+ ILPC HNLC+ CA +I
Sbjct: 17 MDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDI 54
Score = 46.2 bits (108), Expect = 8e-05
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 128 CPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQ---LCEKAPKE-ATVMCE 183
CP C ++LD G+ G +N ++E +ID Y+Q K +CE+ +E + C
Sbjct: 78 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYCL 137
Query: 184 QCDVFYCDPCRL 195
C+V C C++
Sbjct: 138 NCEVPTCSLCKV 149
>gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens]
Length = 548
Score = 70.1 bits (170), Expect = 5e-12
Identities = 43/165 (26%), Positives = 81/165 (49%)
Query: 229 CTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRA 288
C +HE E ++YC+ C++P C C G H +V L +++ KS+LS + L
Sbjct: 124 CEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGSN 183
Query: 289 KEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKV 348
+ + QL + + I+E + + L + D L L RK ++ + + E KL+
Sbjct: 184 DRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQEEKLEH 243
Query: 349 VRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRV 393
VR I + L + L+E ++ + E + + FLQ + L++++
Sbjct: 244 VRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKI 288
Score = 47.4 bits (111), Expect = 3e-05
Identities = 18/38 (47%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 1 MEEMEEELKCPVCGSFYREPI-ILPCSHNLCQACARNI 37
M+ +E++L CP+C + +P+ ILPC HNLC+ CA +I
Sbjct: 17 MDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDI 54
Score = 46.2 bits (108), Expect = 8e-05
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 128 CPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQ---LCEKAPKE-ATVMCE 183
CP C ++LD G+ G +N ++E +ID Y+Q K +CE+ +E + C
Sbjct: 78 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYCL 137
Query: 184 QCDVFYCDPCRL 195
C+V C C++
Sbjct: 138 NCEVPTCSLCKV 149
>gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens]
Length = 540
Score = 70.1 bits (170), Expect = 5e-12
Identities = 43/165 (26%), Positives = 81/165 (49%)
Query: 229 CTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRA 288
C +HE E ++YC+ C++P C C G H +V L +++ KS+LS + L
Sbjct: 124 CEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAILVGSN 183
Query: 289 KEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKV 348
+ + QL + + I+E + + L + D L L RK ++ + + E KL+
Sbjct: 184 DRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQEEKLEH 243
Query: 349 VRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRV 393
VR I + L + L+E ++ + E + + FLQ + L++++
Sbjct: 244 VRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKI 288
Score = 47.4 bits (111), Expect = 3e-05
Identities = 18/38 (47%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 1 MEEMEEELKCPVCGSFYREPI-ILPCSHNLCQACARNI 37
M+ +E++L CP+C + +P+ ILPC HNLC+ CA +I
Sbjct: 17 MDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDI 54
Score = 46.2 bits (108), Expect = 8e-05
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 128 CPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQ---LCEKAPKE-ATVMCE 183
CP C ++LD G+ G +N ++E +ID Y+Q K +CE+ +E + C
Sbjct: 78 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPEKKSDQPMCEEHEEERINIYCL 137
Query: 184 QCDVFYCDPCRL 195
C+V C C++
Sbjct: 138 NCEVPTCSLCKV 149
>gi|54792146 tripartite motif-containing 47 [Homo sapiens]
Length = 638
Score = 68.9 bits (167), Expect = 1e-11
Identities = 108/424 (25%), Positives = 151/424 (35%), Gaps = 102/424 (24%)
Query: 10 CPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSHRAAGSGVSDYDYLDLDKMS 69
CP+C REP+ LPC HN C AC + HR A
Sbjct: 9 CPICLEPLREPVTLPCGHNFCLACLGALW----------PHRGA---------------- 42
Query: 70 LYSEADSGYGSYGGFASAPTTPCQKS-PNGVRVF----------------PPAMPPPATH 112
SG G GG A P CQ+ P+G+++ P + P PA
Sbjct: 43 ------SGAGGPGGAARCPL--CQEPFPDGLQLRKNHTLSELLQLRQGSGPGSGPGPAPA 94
Query: 113 LSP------ALAPVPRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAAL 166
L+P AL VP S P+ +P +
Sbjct: 95 LAPEPSAPSALPSVPEPSAPCAPE-------------PWPAGE--------------EPV 127
Query: 167 KCQLC-EKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRK 225
+C C E A A + C C +C P L H L HRLVPP + R+ L PR
Sbjct: 128 RCDACPEGAALPAALSCLSCLASFC-PAHLGPHERSPALRGHRLVPPLR-RLEESLCPR- 184
Query: 226 VSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLS 285
L YC ++ +C C + +H HE+ L L +++ S+ L+ +
Sbjct: 185 -------HLRPLERYCRAERVCLCEACAAQ-EHRGHELVPLEQERALQEAEQSKVLSAVE 236
Query: 286 DRAKEAKEFLVQLRNMVQQIQENSV-EFEACLVAQCDALIDALNRRKAQLLARVNKEHEH 344
DR E + Q R V I+ +V E E DA AL + Q+L + +
Sbjct: 237 DRMDELGAGIAQSRRTVALIKSAAVAERERVSRLFADAAA-ALQGFQTQVLGFIEEGEAA 295
Query: 345 KLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGT 404
L + + + R L + E D FLQ + L R+ L ED G G
Sbjct: 296 MLGRSQGDLRR-QEEQRSRLSRARQNLSQVPEADSVSFLQ--ELLALRLAL-EDGCGPGP 351
Query: 405 LTPR 408
PR
Sbjct: 352 GPPR 355
>gi|52487176 tripartite motif-containing 37 protein [Homo sapiens]
Length = 964
Score = 65.1 bits (157), Expect = 2e-10
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 36/236 (15%)
Query: 160 QSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPC--------RLRCHPPRGPLAKHRLVP 211
+S A +C +C + ++A +C C C C R +C R PL LV
Sbjct: 7 ESIAEVFRCFICMEKLRDAR-LCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVN 65
Query: 212 PAQGR-VSRRLSPRKVSTCTDHE------LENH----SMYCVQCKMPVCYQC-LEEGKHS 259
V+++L ++ + T HE ENH S++C CK +C+QC L G H
Sbjct: 66 CRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHG 125
Query: 260 SHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQ 319
H K L +++ H +++++ + L R L++L ++VQ+++ N EA A+
Sbjct: 126 GHTFKPLAEIYEQHVTKVNEEVAKLRRR-------LMELISLVQEVERN---VEAVRNAK 175
Query: 320 CDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIK 375
D + + ++AR++ + ++KL + Q L Q T L+E L+ ++
Sbjct: 176 -DERVREIRNAVEMMIARLDTQLKNKLITLMGQ----KTSLTQETELLESLLQEVE 226
>gi|15147333 tripartite motif-containing 37 protein [Homo sapiens]
Length = 964
Score = 65.1 bits (157), Expect = 2e-10
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 36/236 (15%)
Query: 160 QSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPC--------RLRCHPPRGPLAKHRLVP 211
+S A +C +C + ++A +C C C C R +C R PL LV
Sbjct: 7 ESIAEVFRCFICMEKLRDAR-LCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVN 65
Query: 212 PAQGR-VSRRLSPRKVSTCTDHE------LENH----SMYCVQCKMPVCYQC-LEEGKHS 259
V+++L ++ + T HE ENH S++C CK +C+QC L G H
Sbjct: 66 CRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHG 125
Query: 260 SHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQ 319
H K L +++ H +++++ + L R L++L ++VQ+++ N EA A+
Sbjct: 126 GHTFKPLAEIYEQHVTKVNEEVAKLRRR-------LMELISLVQEVERN---VEAVRNAK 175
Query: 320 CDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIK 375
D + + ++AR++ + ++KL + Q L Q T L+E L+ ++
Sbjct: 176 -DERVREIRNAVEMMIARLDTQLKNKLITLMGQ----KTSLTQETELLESLLQEVE 226
>gi|55741632 fibronectin type III and SPRY domain containing 2 [Homo
sapiens]
Length = 749
Score = 65.1 bits (157), Expect = 2e-10
Identities = 75/313 (23%), Positives = 133/313 (42%), Gaps = 24/313 (7%)
Query: 231 DHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKE 290
+ E E ++CV CK P+ +H HEV L + K ++ + + L + E
Sbjct: 170 EDEEEAADVFCVTCKTPIRAFQKVFDEHKEHEVIPLNEALESAKDEIHKNMYKLEKQIIE 229
Query: 291 AKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVR 350
+ F L + ++EN + E + + +++ L ++ + + + ++ + KL+ +
Sbjct: 230 MENFANHLEEVFITVEENFGKQEQNFESHYNEILETLAQKYEEKIQALGEKKKEKLEALY 289
Query: 351 DQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMT 410
Q+ C L LME E+ E + F++ + A+ D+ GK T
Sbjct: 290 GQLVSCGENLDTCKELMETIEEMCHE-EKVDFIKDAVAMA-------DRLGKFLKTK--- 338
Query: 411 TDFDLSLDNSPLLQSIHQLDFVQVKASS---PVPATPIL--QLEECCTHNNSATLSWKQP 465
TD ++S Q++ D Q+ S P P+ P++ Q+ T +S + W
Sbjct: 339 TDVEISAQPEFEDQTLDFSDVEQLMGSINTIPAPSAPVINPQVPNSAT-GSSVRVCWSLY 397
Query: 466 PLSTVPADGYILE---LDDGNGG--QFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTG 520
TV + Y L + D + G Q KET C+V L N+ Y V A N+ G
Sbjct: 398 SDDTV--ESYQLSYRPVQDSSPGTDQAEFTVTVKETYCSVTNLVPNTQYEFWVTAHNRAG 455
Query: 521 VSPYSKTLVLQTS 533
SP S+ V T+
Sbjct: 456 PSPSSERAVYMTA 468
>gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens]
Length = 744
Score = 63.2 bits (152), Expect = 6e-10
Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 3/205 (1%)
Query: 225 KVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGL 284
K +C +H+ YC C+ +C +C E G+H+ H L + + HK+ L L+ +
Sbjct: 114 KPLSCPNHDGNVMEFYCQSCETAMCRECTE-GEHAEHPTVPLKDVVEQHKASLQVQLDAV 172
Query: 285 SDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEH 344
+ R E L + ++ Q+ + + D L LN RK+ LL + +
Sbjct: 173 NKRLPEIDSALQFISEIIHQLTNQKASIVDDIHSTFDELQKTLNVRKSVLLMELEVNYGL 232
Query: 345 KLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGT 404
K KV++ Q+ + + + + L + + +++ DQ
Sbjct: 233 KHKVLQSQLDTLLQGQESIKSCSNFTAQALNHGTETEVLLVKKQMSEKLNELADQ--DFP 290
Query: 405 LTPRMTTDFDLSLDNSPLLQSIHQL 429
L PR D ++ L +SIH L
Sbjct: 291 LHPRENDQLDFIVETEGLKKSIHNL 315
Score = 36.2 bits (82), Expect = 0.080
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 8 LKCPVCGSFYREPIILPCSHNLCQACARNIL 38
L C +C Y+ P +LPC H C+ C +N +
Sbjct: 21 LICSICLERYKNPKVLPCLHTFCERCLQNYI 51
>gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens]
Length = 771
Score = 63.2 bits (152), Expect = 6e-10
Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 3/205 (1%)
Query: 225 KVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGL 284
K +C +H+ YC C+ +C +C E G+H+ H L + + HK+ L L+ +
Sbjct: 141 KPLSCPNHDGNVMEFYCQSCETAMCRECTE-GEHAEHPTVPLKDVVEQHKASLQVQLDAV 199
Query: 285 SDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEH 344
+ R E L + ++ Q+ + + D L LN RK+ LL + +
Sbjct: 200 NKRLPEIDSALQFISEIIHQLTNQKASIVDDIHSTFDELQKTLNVRKSVLLMELEVNYGL 259
Query: 345 KLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGT 404
K KV++ Q+ + + + + L + + +++ DQ
Sbjct: 260 KHKVLQSQLDTLLQGQESIKSCSNFTAQALNHGTETEVLLVKKQMSEKLNELADQ--DFP 317
Query: 405 LTPRMTTDFDLSLDNSPLLQSIHQL 429
L PR D ++ L +SIH L
Sbjct: 318 LHPRENDQLDFIVETEGLKKSIHNL 342
Score = 36.2 bits (82), Expect = 0.080
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 8 LKCPVCGSFYREPIILPCSHNLCQACARNIL 38
L C +C Y+ P +LPC H C+ C +N +
Sbjct: 48 LICSICLERYKNPKVLPCLHTFCERCLQNYI 78
>gi|15208643 ADP-ribosylation factor domain protein 1 isoform gamma
[Homo sapiens]
Length = 546
Score = 62.4 bits (150), Expect = 1e-09
Identities = 66/291 (22%), Positives = 112/291 (38%), Gaps = 48/291 (16%)
Query: 126 ITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQ---------------SKAAALKCQL 170
I CP + L D G+ G KN L +++R Q S + ++C
Sbjct: 70 IRCPFDRQVTDLGDSGVWGLKKNFALLELLERLQNGPIGQYGAAEESIGISGESIIRCD- 128
Query: 171 CEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCT 230
E A+V C C C C H + LAKHR VP A P + + C+
Sbjct: 129 -EDEAHLASVYCTVCATHLCSECSQVTHSTK-TLAKHRRVPLAD-------KPHEKTMCS 179
Query: 231 DHELENHSMYCV----QCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSD 286
H++ C+ Q +C C E GKH H+ L ++ + + +
Sbjct: 180 QHQVHAIEFVCLEEGCQTSPLMCCVCKEYGKHQGHKHSVLEPEANQIRASILDMAHCIRT 239
Query: 287 RAKEAKEFLVQLRNMVQQIQ--ENSVE-----------------FEACLVAQCDALIDAL 327
+E ++ +L +VQ I+ E VE +C+ A L + L
Sbjct: 240 FTEEISDYSRKLVGIVQHIEGGEQIVEDGIGMAHTEHVPGTAENARSCIRAYFYDLHETL 299
Query: 328 NRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKEND 378
R++ L+ V+ KL +R Q T+ L + + +C + ++++D
Sbjct: 300 CRQEEMALSVVDAHVREKLIWLRQQQEDMTILLSEVSAACLHCEKTLQQDD 350
>gi|15208641 ADP-ribosylation factor domain protein 1 isoform beta
[Homo sapiens]
Length = 569
Score = 62.4 bits (150), Expect = 1e-09
Identities = 66/291 (22%), Positives = 112/291 (38%), Gaps = 48/291 (16%)
Query: 126 ITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQ---------------SKAAALKCQL 170
I CP + L D G+ G KN L +++R Q S + ++C
Sbjct: 70 IRCPFDRQVTDLGDSGVWGLKKNFALLELLERLQNGPIGQYGAAEESIGISGESIIRCD- 128
Query: 171 CEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCT 230
E A+V C C C C H + LAKHR VP A P + + C+
Sbjct: 129 -EDEAHLASVYCTVCATHLCSECSQVTHSTK-TLAKHRRVPLAD-------KPHEKTMCS 179
Query: 231 DHELENHSMYCV----QCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSD 286
H++ C+ Q +C C E GKH H+ L ++ + + +
Sbjct: 180 QHQVHAIEFVCLEEGCQTSPLMCCVCKEYGKHQGHKHSVLEPEANQIRASILDMAHCIRT 239
Query: 287 RAKEAKEFLVQLRNMVQQIQ--ENSVE-----------------FEACLVAQCDALIDAL 327
+E ++ +L +VQ I+ E VE +C+ A L + L
Sbjct: 240 FTEEISDYSRKLVGIVQHIEGGEQIVEDGIGMAHTEHVPGTAENARSCIRAYFYDLHETL 299
Query: 328 NRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKEND 378
R++ L+ V+ KL +R Q T+ L + + +C + ++++D
Sbjct: 300 CRQEEMALSVVDAHVREKLIWLRQQQEDMTILLSEVSAACLHCEKTLQQDD 350
>gi|4502197 ADP-ribosylation factor domain protein 1 isoform alpha
[Homo sapiens]
Length = 574
Score = 62.4 bits (150), Expect = 1e-09
Identities = 66/291 (22%), Positives = 112/291 (38%), Gaps = 48/291 (16%)
Query: 126 ITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQ---------------SKAAALKCQL 170
I CP + L D G+ G KN L +++R Q S + ++C
Sbjct: 70 IRCPFDRQVTDLGDSGVWGLKKNFALLELLERLQNGPIGQYGAAEESIGISGESIIRCD- 128
Query: 171 CEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCT 230
E A+V C C C C H + LAKHR VP A P + + C+
Sbjct: 129 -EDEAHLASVYCTVCATHLCSECSQVTHSTK-TLAKHRRVPLAD-------KPHEKTMCS 179
Query: 231 DHELENHSMYCV----QCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSD 286
H++ C+ Q +C C E GKH H+ L ++ + + +
Sbjct: 180 QHQVHAIEFVCLEEGCQTSPLMCCVCKEYGKHQGHKHSVLEPEANQIRASILDMAHCIRT 239
Query: 287 RAKEAKEFLVQLRNMVQQIQ--ENSVE-----------------FEACLVAQCDALIDAL 327
+E ++ +L +VQ I+ E VE +C+ A L + L
Sbjct: 240 FTEEISDYSRKLVGIVQHIEGGEQIVEDGIGMAHTEHVPGTAENARSCIRAYFYDLHETL 299
Query: 328 NRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKEND 378
R++ L+ V+ KL +R Q T+ L + + +C + ++++D
Sbjct: 300 CRQEEMALSVVDAHVREKLIWLRQQQEDMTILLSEVSAACLHCEKTLQQDD 350
>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
Length = 4069
Score = 60.5 bits (145), Expect = 4e-09
Identities = 77/329 (23%), Positives = 130/329 (39%), Gaps = 30/329 (9%)
Query: 220 RLSPRKVSTCTDHELENHSM--YCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQL 277
+LS V+ EL+ + YC CK P+ G H HEV L K QL
Sbjct: 3490 QLSSEVVTEKAQKELKKSQIDTYCYTCKCPISATDKVFGTHKDHEVSTLDTAISAVKVQL 3549
Query: 278 SQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALID---ALNRRKAQL 334
++ L L +++ + F+ ++ + I+EN + E L Q + ++ A KAQ
Sbjct: 3550 AEFLENLQEKSLRIEAFVSEIESFFNTIEENCSKNEKRLEEQNEEMMKKVLAQYDEKAQS 3609
Query: 335 LARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVH 394
V K+ K++ + +Q+ H + +E + +E D + FL + + R+
Sbjct: 3610 FEEVKKK---KMEFLHEQMVHFLQSMDTAKDTLETIVREAEELDEAVFLTSFEEINERLL 3666
Query: 395 LTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECCTH 454
+ P + F+ D+S Q+ VP P L+ +E
Sbjct: 3667 SAMESTASLEKMPAAFSLFEHYDDSSARSD--------QMLKQVAVPQPPRLEPQE---- 3714
Query: 455 NNSAT-----LSWKQPPLSTVPA-DGYILE--LDDGNGGQFREVY--VGKETMCTVDGLH 504
NSAT + W + + Y +E DD + E Y KE+ C + L
Sbjct: 3715 PNSATSTTIAVYWSMNKEDVIDSFQVYCMEEPQDDQEVNELVEEYRLTVKESYCIFEDLE 3774
Query: 505 FNSTYNARVKAFNKTGVSPYSKTLVLQTS 533
+ Y V A N TG S S+ + +T+
Sbjct: 3775 PDRCYQVWVMAVNFTGCSLPSERAIFRTA 3803
Score = 37.4 bits (85), Expect = 0.036
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 441 PATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILEL--DDGNGGQFREVYVGKETMC 498
P+TP+++ E+C N+AT+ W+ P + + Y LE G+ + G + +
Sbjct: 3804 PSTPVIRAEDCTVCWNTATIRWR--PTTPEATETYTLEYCRQHSPEGEGLRSFSGIKGLQ 3861
Query: 499 TVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQT 532
L N Y V+A N G S S+ ++ T
Sbjct: 3862 LKVNLQPNDNYFFYVRAINAFGTSEQSEAALIST 3895
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,813,869
Number of Sequences: 37866
Number of extensions: 1206882
Number of successful extensions: 6335
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 155
Number of HSP's that attempted gapping in prelim test: 5440
Number of HSP's gapped (non-prelim): 948
length of query: 550
length of database: 18,247,518
effective HSP length: 107
effective length of query: 443
effective length of database: 14,195,856
effective search space: 6288764208
effective search space used: 6288764208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.