FSD1 3087

Name: FSD1	Sequence: fasta or formatted (496aa)		NCBI GI: 13236585
Description: fibronectin type III and SPRY domain containing 1		Referenced in: Centrosome Fibronectin Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 42 2 C cysteine 1.6 8 1 D aspartate 5.4 27 2 E glutamate 7.3 36 2 F phenylalanine 4.6 23 1 G glycine 5.2 26 2 H histidine 1.8 9 1 I isoleucine 2.6 13 2 K lysine 6.5 32 1 L leucine 10.1 50 2 M methionine 3.2 16 1 N asparagine 3.4 17 2 P proline 4.4 22 2 Q glutamine 5.4 27 1 R arginine 5.8 29 2 S serine 7.3 36 3 T threonine 6.2 31 2 V valine 6.9 34 1 W tryptophan 1.4 7 1 Y tyrosine 2.2 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 fibronectin type III and SPRY domain containing 1 [H... FSD1L 0.610 fibronectin type III and SPRY domain containing 1-li... FSD1L 0.607 fibronectin type III and SPRY domain containing 1-l... MID1 0.191 midline 1 MID1 0.191 midline 1 MID1 0.191 midline 1 MID2 0.180 midline 2 isoform 2 MID2 0.172 midline 2 isoform 1 TRIM46 0.095 tripartite motif-containing 46 FSD1L 0.090 fibronectin type III and SPRY domain containing 1-li... TRIM36 0.079 tripartite motif-containing 36 isoform 1 TRIM67 0.074 tripartite motif-containing 67 TRIM9 0.063 tripartite motif protein 9 isoform 1 FSD2 0.056 fibronectin type III and SPRY domain containing 2 [H... CMYA5 0.053 cardiomyopathy associated 5 TRIM9 0.053 tripartite motif protein 9 isoform 2 SPRYD4 0.046 SPRY domain containing 4 TRIM14 0.041 tripartite motif protein TRIM14 isoform alpha TRIM14 0.041 tripartite motif protein TRIM14 isoform alpha TRIM14 0.041 tripartite motif protein TRIM14 isoform alpha TRIM63 0.041 muscle specific ring finger protein 1 TRIM25 0.039 tripartite motif-containing 25 TRIM65 0.032 tripartite motif-containing 65 ERMAP 0.032 erythroblast membrane-associated protein precursor [... ERMAP 0.032 erythroblast membrane-associated protein precursor [... TRIM54 0.032 ring finger protein 30 isoform 2 RNF135 0.031 ring finger protein 135 isoform 1 TRIM60 0.030 ring finger protein 129 TRIM54 0.030 ring finger protein 30 isoform 1 TRIM62 0.029 tripartite motif-containing 62 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.