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Search of human proteins with 158186614
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|158186614 transmembrane protein 118 isoform 1 [Homo sapiens]
(444 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|158186614 transmembrane protein 118 isoform 1 [Homo sapiens] 905 0.0
gi|158186612 transmembrane protein 118 isoform 2 [Homo sapiens] 806 0.0
gi|109134327 PTD016 protein [Homo sapiens] 315 4e-86
gi|87241872 ring finger protein 151 [Homo sapiens] 55 2e-07
gi|21389515 ring finger protein 145 [Homo sapiens] 50 4e-06
gi|21361493 ring finger protein 141 [Homo sapiens] 50 5e-06
gi|24797089 peroxisome biogenesis factor 10 isoform 1 [Homo sapi... 48 2e-05
gi|4505715 peroxisome biogenesis factor 10 isoform 2 [Homo sapiens] 48 2e-05
gi|88759348 ring finger protein 219 [Homo sapiens] 48 2e-05
gi|56711322 ring finger protein 43 [Homo sapiens] 47 5e-05
gi|239755644 PREDICTED: tripartite motif-containing 77 [Homo sap... 46 6e-05
gi|239750143 PREDICTED: tripartite motif-containing 77 [Homo sap... 46 6e-05
gi|239744448 PREDICTED: hypothetical protein XP_002343148 [Homo ... 46 6e-05
gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens] 46 6e-05
gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens] 46 6e-05
gi|225903455 tripartite motif-containing 77 [Homo sapiens] 46 6e-05
gi|30023818 tripartite motif protein 50A [Homo sapiens] 45 1e-04
gi|73747840 LON peptidase N-terminal domain and ring finger 3 is... 45 1e-04
gi|37622896 LON peptidase N-terminal domain and ring finger 3 is... 45 1e-04
gi|239755486 PREDICTED: tripartite motif-containing protein 64C-... 45 1e-04
gi|239755484 PREDICTED: tripartite motif-containing protein 64C-... 45 1e-04
gi|239750044 PREDICTED: tripartite motif-containing protein 64C-... 45 1e-04
gi|239750042 PREDICTED: tripartite motif-containing protein 64C-... 45 1e-04
gi|239744355 PREDICTED: tripartite motif-containing protein 64C-... 45 1e-04
gi|239744353 PREDICTED: tripartite motif-containing protein 64C-... 45 1e-04
gi|21071052 helicase-like transcription factor [Homo sapiens] 45 1e-04
gi|21071054 helicase-like transcription factor [Homo sapiens] 45 1e-04
gi|37588861 ring finger protein 41 isoform 1 [Homo sapiens] 45 1e-04
gi|5032071 ring finger protein 41 isoform 1 [Homo sapiens] 45 1e-04
gi|4504867 ring finger protein 8 isoform 1 [Homo sapiens] 45 2e-04
>gi|158186614 transmembrane protein 118 isoform 1 [Homo sapiens]
Length = 444
Score = 905 bits (2339), Expect = 0.0
Identities = 444/444 (100%), Positives = 444/444 (100%)
Query: 1 MWLFTVNQVLRKMQRRHSSNTDNIPPERNRSQALSSEASVDEGGVFESLKAEAASPPALF 60
MWLFTVNQVLRKMQRRHSSNTDNIPPERNRSQALSSEASVDEGGVFESLKAEAASPPALF
Sbjct: 1 MWLFTVNQVLRKMQRRHSSNTDNIPPERNRSQALSSEASVDEGGVFESLKAEAASPPALF 60
Query: 61 SGLSGSLPTSSFPSSLVLGSSAGGGDVFIQMPASREEGGGRGEGGAYHHRQPHHHFHHGG 120
SGLSGSLPTSSFPSSLVLGSSAGGGDVFIQMPASREEGGGRGEGGAYHHRQPHHHFHHGG
Sbjct: 61 SGLSGSLPTSSFPSSLVLGSSAGGGDVFIQMPASREEGGGRGEGGAYHHRQPHHHFHHGG 120
Query: 121 HRGGSLLQHVGGDHRGHSEEGGDEQPGTPAPALSELKAVICWLQKGLPFILILLAKLCFQ 180
HRGGSLLQHVGGDHRGHSEEGGDEQPGTPAPALSELKAVICWLQKGLPFILILLAKLCFQ
Sbjct: 121 HRGGSLLQHVGGDHRGHSEEGGDEQPGTPAPALSELKAVICWLQKGLPFILILLAKLCFQ 180
Query: 181 HKLGIAVCIGMASTFAYANSTLREQVSLKEKRSVLVILWILAFLAGNTLYVLYTFSSQQL 240
HKLGIAVCIGMASTFAYANSTLREQVSLKEKRSVLVILWILAFLAGNTLYVLYTFSSQQL
Sbjct: 181 HKLGIAVCIGMASTFAYANSTLREQVSLKEKRSVLVILWILAFLAGNTLYVLYTFSSQQL 240
Query: 241 YNSLIFLKPNLEMLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILAVKSKGKFYLV 300
YNSLIFLKPNLEMLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILAVKSKGKFYLV
Sbjct: 241 YNSLIFLKPNLEMLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILAVKSKGKFYLV 300
Query: 301 IEELSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGVRKALK 360
IEELSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGVRKALK
Sbjct: 301 IEELSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGVRKALK 360
Query: 361 LLCTSQNYGVRATGQQCTEAGDICAICQAEFREPLILLCQHVFCEECLCLWLDRERTCPL 420
LLCTSQNYGVRATGQQCTEAGDICAICQAEFREPLILLCQHVFCEECLCLWLDRERTCPL
Sbjct: 361 LLCTSQNYGVRATGQQCTEAGDICAICQAEFREPLILLCQHVFCEECLCLWLDRERTCPL 420
Query: 421 CRSVAVDTLRCWKDGATSAHFQVY 444
CRSVAVDTLRCWKDGATSAHFQVY
Sbjct: 421 CRSVAVDTLRCWKDGATSAHFQVY 444
>gi|158186612 transmembrane protein 118 isoform 2 [Homo sapiens]
Length = 420
Score = 806 bits (2081), Expect = 0.0
Identities = 400/400 (100%), Positives = 400/400 (100%)
Query: 1 MWLFTVNQVLRKMQRRHSSNTDNIPPERNRSQALSSEASVDEGGVFESLKAEAASPPALF 60
MWLFTVNQVLRKMQRRHSSNTDNIPPERNRSQALSSEASVDEGGVFESLKAEAASPPALF
Sbjct: 1 MWLFTVNQVLRKMQRRHSSNTDNIPPERNRSQALSSEASVDEGGVFESLKAEAASPPALF 60
Query: 61 SGLSGSLPTSSFPSSLVLGSSAGGGDVFIQMPASREEGGGRGEGGAYHHRQPHHHFHHGG 120
SGLSGSLPTSSFPSSLVLGSSAGGGDVFIQMPASREEGGGRGEGGAYHHRQPHHHFHHGG
Sbjct: 61 SGLSGSLPTSSFPSSLVLGSSAGGGDVFIQMPASREEGGGRGEGGAYHHRQPHHHFHHGG 120
Query: 121 HRGGSLLQHVGGDHRGHSEEGGDEQPGTPAPALSELKAVICWLQKGLPFILILLAKLCFQ 180
HRGGSLLQHVGGDHRGHSEEGGDEQPGTPAPALSELKAVICWLQKGLPFILILLAKLCFQ
Sbjct: 121 HRGGSLLQHVGGDHRGHSEEGGDEQPGTPAPALSELKAVICWLQKGLPFILILLAKLCFQ 180
Query: 181 HKLGIAVCIGMASTFAYANSTLREQVSLKEKRSVLVILWILAFLAGNTLYVLYTFSSQQL 240
HKLGIAVCIGMASTFAYANSTLREQVSLKEKRSVLVILWILAFLAGNTLYVLYTFSSQQL
Sbjct: 181 HKLGIAVCIGMASTFAYANSTLREQVSLKEKRSVLVILWILAFLAGNTLYVLYTFSSQQL 240
Query: 241 YNSLIFLKPNLEMLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILAVKSKGKFYLV 300
YNSLIFLKPNLEMLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILAVKSKGKFYLV
Sbjct: 241 YNSLIFLKPNLEMLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILAVKSKGKFYLV 300
Query: 301 IEELSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGVRKALK 360
IEELSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGVRKALK
Sbjct: 301 IEELSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGVRKALK 360
Query: 361 LLCTSQNYGVRATGQQCTEAGDICAICQAEFREPLILLCQ 400
LLCTSQNYGVRATGQQCTEAGDICAICQAEFREPLILLCQ
Sbjct: 361 LLCTSQNYGVRATGQQCTEAGDICAICQAEFREPLILLCQ 400
>gi|109134327 PTD016 protein [Homo sapiens]
Length = 435
Score = 315 bits (808), Expect = 4e-86
Identities = 168/427 (39%), Positives = 252/427 (59%), Gaps = 21/427 (4%)
Query: 28 RNRSQALSSEASVDEGGVFESLKAEAASPPALFSGLSGSLPTSSFPSSLVLGSSAGGGDV 87
R R +A +S + ++ +++ SPP S S P GS GDV
Sbjct: 20 RQRPEAKTSGSEKKYLRAMQANRSQLHSPPGTGSSEDASTPQCVHTRLTGEGSCPHSGDV 79
Query: 88 FIQMPASREEGGGRGEGGAYHHRQPHHHFHHGGHRGGSLLQHVGGDHRGHS-------EE 140
IQ+ + +E + + R H HG V RGHS ++
Sbjct: 80 HIQINSIPKECAENAS--SRNIRSGVHSCAHGC---------VHSRLRGHSHSEARLTDD 128
Query: 141 GGDEQPGTPAPALSELKAVICWLQKGLPFILILLAKLCFQHKLGIAVCIGMASTFAYANS 200
E + + SE + + WLQK LP+ILIL KL QH GI++ IG+ +TF YAN
Sbjct: 129 TAAESGDHGSSSFSEFRYLFKWLQKSLPYILILSVKLVMQHITGISLGIGLLTTFMYANK 188
Query: 201 TLREQVSLKEKRSVLVILWILAFLAGNTLYVLYTFSSQQLYNSLIFLKPNLEMLDFFDLL 260
++ QV L+E+ S + W+L FLAG+++ + YTF SQ LY SLIFL P L+ L F+++
Sbjct: 189 SIVNQVFLRERSSKIQCAWLLVFLAGSSVLLYYTFHSQSLYYSLIFLNPTLDHLSFWEVF 248
Query: 261 WIVGIADFVLKYITIALKCLIVALPKIILAVKSKGKFYLVIEELSQLFRSLVPIQLWYKY 320
WIVGI DF+LK+ + LKCLI+ +P I+ KSKG +Y+++EEL Q +R+ VPI +W++Y
Sbjct: 249 WIVGITDFILKFFFMGLKCLILLVPSFIMPFKSKGYWYMLLEELCQYYRTFVPIPVWFRY 308
Query: 321 IMGDDSSNS---YFLGGVLIVLYSLCKSFDICGRVGGVRKALKLLCTSQNYGVRATGQQC 377
++ + + LG +L +LY + K + G + R+ L++ T +YGV A+ +QC
Sbjct: 309 LISYGEFGNVTRWSLGILLALLYLILKLLEFFGHLRTFRQVLRIFFTQPSYGVAASKRQC 368
Query: 378 TEAGDICAICQAEFREPLILLCQHVFCEECLCLWLDRERTCPLCRSVAVDTLRCWKDGAT 437
++ DIC+ICQAEF++P++L+CQH+FCEEC+ LW +RE+TCPLCR+V D + WKDGAT
Sbjct: 369 SDVDDICSICQAEFQKPILLICQHIFCEECMTLWFNREKTCPLCRTVISDHINKWKDGAT 428
Query: 438 SAHFQVY 444
S+H Q+Y
Sbjct: 429 SSHLQIY 435
>gi|87241872 ring finger protein 151 [Homo sapiens]
Length = 245
Score = 54.7 bits (130), Expect = 2e-07
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 383 ICAICQAEFREPLILLCQHVFCEECLCLWLDRERTCPLCR 422
+C++C + P L C H+FC++C+ WL R++TCP CR
Sbjct: 19 VCSVCHGVLKRPARLPCSHIFCKKCILRWLARQKTCPCCR 58
>gi|21389515 ring finger protein 145 [Homo sapiens]
Length = 691
Score = 50.1 bits (118), Expect = 4e-06
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 372 ATGQQCTEAGDICAICQAEFREPLILLCQHVFCEECLCLWLDRERTCPLC 421
AT +Q + DICAIC + + +I C H F CL WL + TCPLC
Sbjct: 553 ATKEQLEKHNDICAICYQDMKSAVITPCSHFFHAGCLKKWLYVQETCPLC 602
>gi|21361493 ring finger protein 141 [Homo sapiens]
Length = 230
Score = 49.7 bits (117), Expect = 5e-06
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 384 CAICQAEFREPLILLCQHVFCEECLCLWLDRERTCPLCRSVAVDTLRCW 432
C IC + R LIL C H FC++C+ W DR R CP+CR W
Sbjct: 155 CCICM-DGRADLILPCAHSFCQKCIDKWSDRHRNCPICRLQMTGANESW 202
>gi|24797089 peroxisome biogenesis factor 10 isoform 1 [Homo
sapiens]
Length = 346
Score = 47.8 bits (112), Expect = 2e-05
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 375 QQCTEAGDICAICQAEFREPLILLCQHVFCEECLCLWLDRERTCPLCR 422
++ +C +C E R P C H+FC EC+ W + CPLCR
Sbjct: 284 ERAVSRNPLCTLCLEERRHPTATPCGHLFCWECITAWCSSKAECPLCR 331
>gi|4505715 peroxisome biogenesis factor 10 isoform 2 [Homo sapiens]
Length = 326
Score = 47.8 bits (112), Expect = 2e-05
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 375 QQCTEAGDICAICQAEFREPLILLCQHVFCEECLCLWLDRERTCPLCR 422
++ +C +C E R P C H+FC EC+ W + CPLCR
Sbjct: 264 ERAVSRNPLCTLCLEERRHPTATPCGHLFCWECITAWCSSKAECPLCR 311
>gi|88759348 ring finger protein 219 [Homo sapiens]
Length = 726
Score = 47.8 bits (112), Expect = 2e-05
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 384 CAICQAEFREPLILLCQHVFCEECLCLWLDRERTCPLCR 422
C IC + R+P+I + HVFC C+ LWL CP CR
Sbjct: 18 CHICLGKVRQPVICINNHVFCSICIDLWLKNNSQCPACR 56
>gi|56711322 ring finger protein 43 [Homo sapiens]
Length = 783
Score = 46.6 bits (109), Expect = 5e-05
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 373 TGQQCTEAGDICAICQAEF---REPLILLCQHVFCEECLCLWLDRERTCPLC 421
+G C+ A +CAIC EF +E ++ C H F C+ WL + RTCPLC
Sbjct: 262 SGSSCSSA-PVCAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLC 312
>gi|239755644 PREDICTED: tripartite motif-containing 77 [Homo
sapiens]
Length = 455
Score = 46.2 bits (108), Expect = 6e-05
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 376 QCTEAGDICAICQAEFREPLILLCQHVFCEECLC-LWLD--RERTCPLCRSVA 425
QC+ + C+IC +P+ + C H FC CLC LW D CP+CR ++
Sbjct: 7 QCSTSELTCSICTDYLTDPVTICCGHRFCSPCLCLLWEDTLTPNCCPVCREIS 59
>gi|239750143 PREDICTED: tripartite motif-containing 77 [Homo
sapiens]
Length = 455
Score = 46.2 bits (108), Expect = 6e-05
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 376 QCTEAGDICAICQAEFREPLILLCQHVFCEECLC-LWLD--RERTCPLCRSVA 425
QC+ + C+IC +P+ + C H FC CLC LW D CP+CR ++
Sbjct: 7 QCSTSELTCSICTDYLTDPVTICCGHRFCSPCLCLLWEDTLTPNCCPVCREIS 59
>gi|239744448 PREDICTED: hypothetical protein XP_002343148 [Homo
sapiens]
Length = 450
Score = 46.2 bits (108), Expect = 6e-05
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 376 QCTEAGDICAICQAEFREPLILLCQHVFCEECLC-LWLD--RERTCPLCRSVA 425
QC+ + C+IC +P+ + C H FC CLC LW D CP+CR ++
Sbjct: 7 QCSTSELTCSICTDYLTDPVTICCGHRFCSPCLCLLWEDTLTPNCCPVCREIS 59
>gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]
Length = 488
Score = 46.2 bits (108), Expect = 6e-05
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 384 CAICQAEFREPLILLCQHVFCEECLCLW---LDRERTCPLCRSVA 425
C++C +EP+I+ C H FC+ C+ W L+R+ CP+CR +
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTS 73
>gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]
Length = 518
Score = 46.2 bits (108), Expect = 6e-05
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 384 CAICQAEFREPLILLCQHVFCEECLCLW---LDRERTCPLCRSVA 425
C++C +EP+I+ C H FC+ C+ W L+R+ CP+CR +
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTS 73
>gi|225903455 tripartite motif-containing 77 [Homo sapiens]
Length = 450
Score = 46.2 bits (108), Expect = 6e-05
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 376 QCTEAGDICAICQAEFREPLILLCQHVFCEECLC-LWLD--RERTCPLCRSVA 425
QC+ + C+IC +P+ + C H FC CLC LW D CP+CR ++
Sbjct: 7 QCSTSELTCSICTDYLTDPVTICCGHRFCSPCLCLLWEDTLTPNCCPVCREIS 59
>gi|30023818 tripartite motif protein 50A [Homo sapiens]
Length = 487
Score = 45.4 bits (106), Expect = 1e-04
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 384 CAICQAEFREPLILLCQHVFCEEC---LCLWLDRERTCPLCRSVAVD 427
C IC F+EPL+L C H +C+ C L LD E CP+CR AVD
Sbjct: 16 CPICLEVFKEPLMLQCGHSYCKGCLVSLSCHLDAELRCPVCRQ-AVD 61
>gi|73747840 LON peptidase N-terminal domain and ring finger 3
isoform 1 [Homo sapiens]
Length = 759
Score = 45.4 bits (106), Expect = 1e-04
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 379 EAGDI-CAICQAEFREPLILLCQHVFCEECLCLWLDRERTCPLCR 422
+A D+ CA+C F EP+ C H FC +CL LD CPLC+
Sbjct: 461 DASDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCK 505
Score = 33.5 bits (75), Expect = 0.40
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 384 CAICQAEFREPLILLCQHVFCEECLCLWLDRERTCPLC 421
C C +P+ L C H FC+ CL +R C LC
Sbjct: 158 CRKCHGFLSDPVSLSCGHTFCKLCLERGRAADRRCALC 195
>gi|37622896 LON peptidase N-terminal domain and ring finger 3
isoform 2 [Homo sapiens]
Length = 718
Score = 45.4 bits (106), Expect = 1e-04
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 379 EAGDI-CAICQAEFREPLILLCQHVFCEECLCLWLDRERTCPLCR 422
+A D+ CA+C F EP+ C H FC +CL LD CPLC+
Sbjct: 420 DASDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCK 464
Score = 33.5 bits (75), Expect = 0.40
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 384 CAICQAEFREPLILLCQHVFCEECLCLWLDRERTCPLC 421
C C +P+ L C H FC+ CL +R C LC
Sbjct: 158 CRKCHGFLSDPVSLSCGHTFCKLCLERGRAADRRCALC 195
>gi|239755486 PREDICTED: tripartite motif-containing protein
64C-like isoform 2 [Homo sapiens]
Length = 447
Score = 45.1 bits (105), Expect = 1e-04
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 383 ICAICQAEFREPLILLCQHVFCEECLCLWLDRERT---CPLCRSVA 425
IC IC F +P+ C H FC CLCL + R CPLCR ++
Sbjct: 14 ICCICVNYFIDPVTTDCVHSFCRPCLCLCSEEGRAPMRCPLCRKIS 59
>gi|239755484 PREDICTED: tripartite motif-containing protein
64C-like isoform 1 [Homo sapiens]
Length = 450
Score = 45.1 bits (105), Expect = 1e-04
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 383 ICAICQAEFREPLILLCQHVFCEECLCLWLDRERT---CPLCRSVA 425
IC IC F +P+ C H FC CLCL + R CPLCR ++
Sbjct: 14 ICCICVNYFIDPVTTDCVHSFCRPCLCLCSEEGRAPMRCPLCRKIS 59
>gi|239750044 PREDICTED: tripartite motif-containing protein
64C-like isoform 2 [Homo sapiens]
Length = 447
Score = 45.1 bits (105), Expect = 1e-04
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 383 ICAICQAEFREPLILLCQHVFCEECLCLWLDRERT---CPLCRSVA 425
IC IC F +P+ C H FC CLCL + R CPLCR ++
Sbjct: 14 ICCICVNYFIDPVTTDCVHSFCRPCLCLCSEEGRAPMRCPLCRKIS 59
>gi|239750042 PREDICTED: tripartite motif-containing protein
64C-like isoform 1 [Homo sapiens]
Length = 450
Score = 45.1 bits (105), Expect = 1e-04
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 383 ICAICQAEFREPLILLCQHVFCEECLCLWLDRERT---CPLCRSVA 425
IC IC F +P+ C H FC CLCL + R CPLCR ++
Sbjct: 14 ICCICVNYFIDPVTTDCVHSFCRPCLCLCSEEGRAPMRCPLCRKIS 59
>gi|239744355 PREDICTED: tripartite motif-containing protein
64C-like isoform 1 [Homo sapiens]
Length = 447
Score = 45.1 bits (105), Expect = 1e-04
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 383 ICAICQAEFREPLILLCQHVFCEECLCLWLDRERT---CPLCRSVA 425
IC IC F +P+ C H FC CLCL + R CPLCR ++
Sbjct: 14 ICCICVNYFIDPVTTDCVHSFCRPCLCLCSEEGRAPMRCPLCRKIS 59
>gi|239744353 PREDICTED: tripartite motif-containing protein
64C-like isoform 2 [Homo sapiens]
Length = 450
Score = 45.1 bits (105), Expect = 1e-04
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 383 ICAICQAEFREPLILLCQHVFCEECLCLWLDRERT---CPLCRSVA 425
IC IC F +P+ C H FC CLCL + R CPLCR ++
Sbjct: 14 ICCICVNYFIDPVTTDCVHSFCRPCLCLCSEEGRAPMRCPLCRKIS 59
>gi|21071052 helicase-like transcription factor [Homo sapiens]
Length = 1009
Score = 45.1 bits (105), Expect = 1e-04
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 384 CAICQAEFREPLILLCQHVFCEECLCLWLDRER---TCPLCRS 423
CAIC P+I C HVFC+ C+C + E+ CPLCR+
Sbjct: 760 CAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRN 802
>gi|21071054 helicase-like transcription factor [Homo sapiens]
Length = 1009
Score = 45.1 bits (105), Expect = 1e-04
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 384 CAICQAEFREPLILLCQHVFCEECLCLWLDRER---TCPLCRS 423
CAIC P+I C HVFC+ C+C + E+ CPLCR+
Sbjct: 760 CAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRN 802
>gi|37588861 ring finger protein 41 isoform 1 [Homo sapiens]
Length = 317
Score = 45.1 bits (105), Expect = 1e-04
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 383 ICAICQAEFREPLILL-CQHVFCEECLCLWLDRERTCPLCRSV 424
IC IC EP+ C+H FC C+ W +++TCP+ RSV
Sbjct: 17 ICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSV 59
>gi|5032071 ring finger protein 41 isoform 1 [Homo sapiens]
Length = 317
Score = 45.1 bits (105), Expect = 1e-04
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 383 ICAICQAEFREPLILL-CQHVFCEECLCLWLDRERTCPLCRSV 424
IC IC EP+ C+H FC C+ W +++TCP+ RSV
Sbjct: 17 ICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSV 59
>gi|4504867 ring finger protein 8 isoform 1 [Homo sapiens]
Length = 485
Score = 44.7 bits (104), Expect = 2e-04
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 384 CAICQAEFREPLILLCQHVFCEECLCLWLDRERTCPLCR 422
C IC F E + L C H FC C+ W+ R+ CP+CR
Sbjct: 403 CIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICR 441
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.139 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,989,813
Number of Sequences: 37866
Number of extensions: 905565
Number of successful extensions: 5334
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 265
Number of HSP's successfully gapped in prelim test: 203
Number of HSP's that attempted gapping in prelim test: 4501
Number of HSP's gapped (non-prelim): 757
length of query: 444
length of database: 18,247,518
effective HSP length: 105
effective length of query: 339
effective length of database: 14,271,588
effective search space: 4838068332
effective search space used: 4838068332
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.