TRIM50 25109

Name: TRIM50	Sequence: fasta or formatted (487aa)		NCBI GI: 30023818
Description: tripartite motif protein 50A		Referenced in: Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 30 2 C cysteine 3.9 19 1 D aspartate 4.1 20 2 E glutamate 7.8 38 2 F phenylalanine 3.5 17 2 G glycine 6.8 33 2 H histidine 4.3 21 2 I isoleucine 3.1 15 1 K lysine 5.1 25 2 L leucine 12.9 63 2 M methionine 1.4 7 1 N asparagine 1.8 9 2 P proline 7.4 36 3 Q glutamine 4.7 23 1 R arginine 6.8 33 2 S serine 6.8 33 3 T threonine 2.9 14 1 V valine 7.0 34 3 W tryptophan 1.6 8 1 Y tyrosine 1.8 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif protein 50A TRIM74 0.459 tripartite motif-containing 74 TRIM73 0.453 tripartite motif-containing 73 TRIM72 0.251 tripartite motif-containing 72 TRIM39 0.206 tripartite motif-containing 39 isoform 2 TRIM62 0.197 tripartite motif-containing 62 TRIM39 0.196 tripartite motif-containing 39 isoform 1 TRIM58 0.190 tripartite motif-containing 58 TRIM69 0.187 tripartite motif-containing 69 isoform a TRIM27 0.184 ret finger protein TRIM7 0.177 tripartite motif-containing 7 isoform 1 TRIM11 0.163 tripartite motif-containing 11 TRIM21 0.162 tripartite motif protein 21 TRIM68 0.156 ring finger protein 137 TRIM60 0.147 ring finger protein 129 TRIM10 0.147 tripartite motif-containing 10 isoform 1 TRIM6 0.147 tripartite motif-containing 6 isoform 2 TRIM6 0.147 tripartite motif-containing 6 isoform 1 TRIM5 0.139 tripartite motif protein TRIM5 isoform alpha TRIM35 0.136 tripartite motif-containing 35 isoform 2 TRIML1 0.134 tripartite motif family-like 1 TRIM41 0.134 tripartite motif-containing 41 isoform 1 TRIM69 0.133 tripartite motif-containing 69 isoform b TRIM17 0.131 tripartite motif-containing 17 isoform 1 TRIM17 0.131 tripartite motif-containing 17 isoform 1 TRIM34 0.128 tripartite motif protein 34 isoform 1 TRIM34 0.128 tripartite motif protein 34 isoform 1 TRIM6-TRIM34 0.128 tripartite motif-containing 6 and tripartite motif-c... TRIM22 0.127 tripartite motif-containing 22 TRIM4 0.126 tripartite motif protein TRIM4 isoform beta Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.