Guide to the Human Genome
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Name: GABRR3 Sequence: fasta or formatted (467aa) NCBI GI: 157743288
Description:

gamma-aminobutyric acid (GABA) receptor, rho 3

Referenced in:

GABA and Glycine

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         21           2
 C cysteine            1.5          7           1
 D aspartate           5.8         27           2
 E glutamate           4.1         19           2
 F phenylalanine       7.1         33           3
 G glycine             3.2         15           2
 H histidine           3.0         14           1
 I isoleucine          6.9         32           2
 K lysine              4.7         22           2
 L leucine             8.4         39           2
 M methionine          4.7         22           1
 N asparagine          4.1         19           2
 P proline             3.0         14           1
 Q glutamine           2.8         13           1
 R arginine            5.8         27           2
 S serine             10.7         50           3
 T threonine           6.2         29           2
 V valine              7.5         35           1
 W tryptophan          1.9          9           1
 Y tyrosine            4.3         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma-aminobutyric acid (GABA) receptor, rho 3 [Hom... 
GABRR1                0.577   gamma-aminobutyric acid (GABA) receptor, rho 1 [Hom...
GABRR2                0.565   gamma-aminobutyric acid (GABA) receptor, rho 2 prec...
GABRB3                0.314   gamma-aminobutyric acid (GABA) A receptor, beta 3 is...
GABRB3                0.314   gamma-aminobutyric acid (GABA) A receptor, beta 3 iso...
GABRB1                0.305   gamma-aminobutyric acid (GABA) A receptor, beta 1 p...
GABRB2                0.304   gamma-aminobutyric acid (GABA) A receptor, beta 2 iso...
GABRD                 0.298   gamma-aminobutyric acid (GABA) A receptor, delta pre...
GABRP                 0.294   gamma-aminobutyric acid (GABA) A receptor, pi 
GABRB2                0.290   gamma-aminobutyric acid (GABA) A receptor, beta 2 is...
GLRA3                 0.262   glycine receptor, alpha 3 isoform a 
GLRA2                 0.257   glycine receptor, alpha 2 isoform B 
GLRA2                 0.256   glycine receptor, alpha 2 isoform A 
GLRA2                 0.256   glycine receptor, alpha 2 isoform A 
GLRA1                 0.255   glycine receptor, alpha 1 isoform 2 precursor [Homo...
GLRA1                 0.254   glycine receptor, alpha 1 isoform 1 precursor [Homo...
GLRA3                 0.254   glycine receptor, alpha 3 isoform b 
GABRQ                 0.252   gamma-aminobutyric acid (GABA) receptor, theta precur...
GLRB                  0.239   glycine receptor, beta 
GLRA4                 0.239   glycine receptor, alpha 4 precursor 
GABRG1                0.232   gamma-aminobutyric acid A receptor, gamma 1 precurso...
GABRG2                0.229   gamma-aminobutyric acid A receptor, gamma 2 isoform ...
GABRA6                0.229   gamma-aminobutyric acid A receptor, alpha 6 precurs...
GABRG2                0.225   gamma-aminobutyric acid A receptor, gamma 2 isoform ...
GABRA5                0.224   gamma-aminobutyric acid (GABA) A receptor, alpha 5 pr...
GABRG3                0.223   gamma-aminobutyric acid (GABA) A receptor, gamma 3 ...
GABRA2                0.215   gamma-aminobutyric acid A receptor, alpha 2 
GABRA2                0.215   gamma-aminobutyric acid A receptor, alpha 2 precurs...
GABRA3                0.215   gamma-aminobutyric acid A receptor, alpha 3 precursor...
GABRA1                0.213   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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