Guide to the Human Genome
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Name: GABRD Sequence: fasta or formatted (452aa) NCBI GI: 34734071
Description:

gamma-aminobutyric acid (GABA) A receptor, delta precursor

Referenced in:

GABA and Glycine

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.8         49           2
 C cysteine            0.9          4           1
 D aspartate           5.1         23           1
 E glutamate           4.2         19           1
 F phenylalanine       4.2         19           1
 G glycine             5.5         25           2
 H histidine           2.0          9           1
 I isoleucine          6.0         27           2
 K lysine              3.1         14           2
 L leucine            10.0         45           4
 M methionine          3.3         15           1
 N asparagine          3.5         16           1
 P proline             3.8         17           2
 Q glutamine           3.3         15           2
 R arginine            7.1         32           2
 S serine              8.0         36           2
 T threonine           4.9         22           2
 V valine              7.7         35           1
 W tryptophan          2.0          9           1
 Y tyrosine            4.6         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma-aminobutyric acid (GABA) A receptor, delta pre... 
GABRB1                0.367   gamma-aminobutyric acid (GABA) A receptor, beta 1 p...
GABRB3                0.364   gamma-aminobutyric acid (GABA) A receptor, beta 3 is...
GABRB2                0.363   gamma-aminobutyric acid (GABA) A receptor, beta 2 iso...
GABRB3                0.360   gamma-aminobutyric acid (GABA) A receptor, beta 3 iso...
GABRB2                0.349   gamma-aminobutyric acid (GABA) A receptor, beta 2 is...
GABRP                 0.342   gamma-aminobutyric acid (GABA) A receptor, pi 
GABRR1                0.327   gamma-aminobutyric acid (GABA) receptor, rho 1 [Hom...
GABRR2                0.322   gamma-aminobutyric acid (GABA) receptor, rho 2 prec...
GABRR3                0.314   gamma-aminobutyric acid (GABA) receptor, rho 3 [Hom...
GABRG2                0.304   gamma-aminobutyric acid A receptor, gamma 2 isoform ...
GLRA2                 0.302   glycine receptor, alpha 2 isoform B 
GLRA2                 0.301   glycine receptor, alpha 2 isoform A 
GLRA2                 0.301   glycine receptor, alpha 2 isoform A 
GLRA3                 0.299   glycine receptor, alpha 3 isoform a 
GABRG2                0.297   gamma-aminobutyric acid A receptor, gamma 2 isoform ...
GLRA1                 0.297   glycine receptor, alpha 1 isoform 2 precursor [Homo...
GLRA3                 0.296   glycine receptor, alpha 3 isoform b 
GLRA1                 0.295   glycine receptor, alpha 1 isoform 1 precursor [Homo...
GABRQ                 0.289   gamma-aminobutyric acid (GABA) receptor, theta precur...
GLRA4                 0.281   glycine receptor, alpha 4 precursor 
GABRG1                0.276   gamma-aminobutyric acid A receptor, gamma 1 precurso...
GABRG2                0.273   gamma-aminobutyric acid A receptor, gamma 2 isoform...
GABRG3                0.272   gamma-aminobutyric acid (GABA) A receptor, gamma 3 ...
GABRA5                0.265   gamma-aminobutyric acid (GABA) A receptor, alpha 5 pr...
GABRA6                0.256   gamma-aminobutyric acid A receptor, alpha 6 precurs...
GABRA2                0.256   gamma-aminobutyric acid A receptor, alpha 2 
GABRA2                0.256   gamma-aminobutyric acid A receptor, alpha 2 precurs...
GABRA4                0.256   gamma-aminobutyric acid A receptor, alpha 4 precurso...
GABRA1                0.252   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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