Guide to the Human Genome
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Name: GABRG2 Sequence: fasta or formatted (475aa) NCBI GI: 38788155
Description:

gamma-aminobutyric acid A receptor, gamma 2 isoform 1 precursor

Referenced in:

GABA and Glycine

Other entries for this name:
alt prot [515aa] gamma-aminobutyric acid A receptor, gamma 2 isoform 3 precursor
alt prot [467aa] gamma-aminobutyric acid A receptor, gamma 2 isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         19           1
 C cysteine            2.1         10           2
 D aspartate           5.9         28           3
 E glutamate           3.6         17           2
 F phenylalanine       5.9         28           2
 G glycine             4.0         19           1
 H histidine           1.7          8           1
 I isoleucine          6.3         30           1
 K lysine              5.5         26           4
 L leucine             8.6         41           4
 M methionine          2.9         14           1
 N asparagine          4.6         22           2
 P proline             4.4         21           1
 Q glutamine           2.1         10           1
 R arginine            5.9         28           2
 S serine              8.4         40           2
 T threonine           8.2         39           2
 V valine              7.6         36           2
 W tryptophan          2.7         13           1
 Y tyrosine            5.5         26           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma-aminobutyric acid A receptor, gamma 2 isoform ... 
GABRG2                0.978   gamma-aminobutyric acid A receptor, gamma 2 isoform...
GABRG2                0.977   gamma-aminobutyric acid A receptor, gamma 2 isoform ...
GABRG1                0.717   gamma-aminobutyric acid A receptor, gamma 1 precurso...
GABRG3                0.662   gamma-aminobutyric acid (GABA) A receptor, gamma 3 ...
GABRE                 0.399   gamma-aminobutyric acid (GABA) A receptor, epsilon p...
GABRA6                0.379   gamma-aminobutyric acid A receptor, alpha 6 precurs...
GABRA3                0.374   gamma-aminobutyric acid A receptor, alpha 3 precursor...
GABRA1                0.368   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.368   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.368   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.368   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.368   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.368   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.368   gamma-aminobutyric acid (GABA) A receptor, alpha 1 p...
GABRA4                0.357   gamma-aminobutyric acid A receptor, alpha 4 precurso...
GABRA5                0.355   gamma-aminobutyric acid (GABA) A receptor, alpha 5 pr...
GABRA2                0.352   gamma-aminobutyric acid A receptor, alpha 2 
GABRA2                0.352   gamma-aminobutyric acid A receptor, alpha 2 precurs...
GABRB1                0.283   gamma-aminobutyric acid (GABA) A receptor, beta 1 p...
GABRB2                0.280   gamma-aminobutyric acid (GABA) A receptor, beta 2 iso...
GABRB3                0.272   gamma-aminobutyric acid (GABA) A receptor, beta 3 is...
GABRB3                0.272   gamma-aminobutyric acid (GABA) A receptor, beta 3 iso...
GABRD                 0.271   gamma-aminobutyric acid (GABA) A receptor, delta pre...
GABRB2                0.268   gamma-aminobutyric acid (GABA) A receptor, beta 2 is...
GLRA1                 0.252   glycine receptor, alpha 1 isoform 1 precursor [Homo...
GLRA3                 0.247   glycine receptor, alpha 3 isoform a 
GLRA3                 0.247   glycine receptor, alpha 3 isoform b 
GLRA2                 0.243   glycine receptor, alpha 2 isoform A 
GLRA2                 0.243   glycine receptor, alpha 2 isoform A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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