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Search of human proteins with 153251840
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|153251840 zinc finger protein 839 [Homo sapiens]
(927 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|153251840 zinc finger protein 839 [Homo sapiens] 1852 0.0
gi|239746767 PREDICTED: hypothetical protein [Homo sapiens] 238 2e-62
gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens] 145 2e-34
gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens] 142 2e-33
gi|239746769 PREDICTED: similar to Serine/threonine-protein kina... 142 2e-33
gi|239757747 PREDICTED: similar to Serine/threonine-protein kina... 87 5e-17
gi|239757749 PREDICTED: hypothetical protein [Homo sapiens] 47 1e-04
gi|156415988 zinc finger and BTB domain containing 7B [Homo sapi... 44 7e-04
gi|239752951 PREDICTED: similar to kruppel-related zinc finger p... 44 7e-04
gi|239752949 PREDICTED: similar to kruppel-related zinc finger p... 44 7e-04
gi|239752947 PREDICTED: similar to kruppel-related zinc finger p... 44 7e-04
gi|66932986 filamin-binding LIM protein-1 isoform b [Homo sapiens] 43 0.001
gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens] 43 0.001
gi|163965366 nascent polypeptide-associated complex alpha subuni... 43 0.002
gi|53831997 suppressor of cytokine signaling 7 [Homo sapiens] 42 0.003
gi|110349719 titin isoform N2-A [Homo sapiens] 42 0.003
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 40 0.013
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.017
gi|100913211 heat shock transcription factor 4 isoform a [Homo s... 39 0.017
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 39 0.017
gi|119943102 CREB binding protein isoform b [Homo sapiens] 39 0.022
gi|119943104 CREB binding protein isoform a [Homo sapiens] 39 0.022
gi|4504733 insulin receptor substrate 4 [Homo sapiens] 39 0.029
gi|5174545 myocyte enhancer factor 2D [Homo sapiens] 39 0.029
gi|4885433 mitogen-activated protein kinase 8 interacting protei... 39 0.029
gi|146134388 YLP motif containing 1 [Homo sapiens] 39 0.029
gi|4502565 calpain, small subunit 1 [Homo sapiens] 38 0.050
gi|51599151 calpain, small subunit 1 [Homo sapiens] 38 0.050
gi|194294548 hsp70-interacting protein [Homo sapiens] 37 0.065
gi|112363070 hsp70-interacting protein [Homo sapiens] 37 0.065
>gi|153251840 zinc finger protein 839 [Homo sapiens]
Length = 927
Score = 1852 bits (4796), Expect = 0.0
Identities = 927/927 (100%), Positives = 927/927 (100%)
Query: 1 MADAEPEAGGGSEDGGGGGGPAPPGQSGSVARVAPLGPEQLRQVLEQVTKAQPPPPPPPF 60
MADAEPEAGGGSEDGGGGGGPAPPGQSGSVARVAPLGPEQLRQVLEQVTKAQPPPPPPPF
Sbjct: 1 MADAEPEAGGGSEDGGGGGGPAPPGQSGSVARVAPLGPEQLRQVLEQVTKAQPPPPPPPF 60
Query: 61 VLRDAARRLRDAAQQAALQRGRGTEPPRLPRLLPPQQLEAICVKVTSGETKGQERPMLLP 120
VLRDAARRLRDAAQQAALQRGRGTEPPRLPRLLPPQQLEAICVKVTSGETKGQERPMLLP
Sbjct: 61 VLRDAARRLRDAAQQAALQRGRGTEPPRLPRLLPPQQLEAICVKVTSGETKGQERPMLLP 120
Query: 121 TTIQPQTARKSQLPRGNSCLVGLHIASPQLLRVQPLVRTEPQSCFLSDLCQPPAQGFVQR 180
TTIQPQTARKSQLPRGNSCLVGLHIASPQLLRVQPLVRTEPQSCFLSDLCQPPAQGFVQR
Sbjct: 121 TTIQPQTARKSQLPRGNSCLVGLHIASPQLLRVQPLVRTEPQSCFLSDLCQPPAQGFVQR 180
Query: 181 PLPALQVVPAKRVPAPKAPDEQGSMLTPLSASDPLAVTSLSSSSAHPFISNLHTRHTEKL 240
PLPALQVVPAKRVPAPKAPDEQGSMLTPLSASDPLAVTSLSSSSAHPFISNLHTRHTEKL
Sbjct: 181 PLPALQVVPAKRVPAPKAPDEQGSMLTPLSASDPLAVTSLSSSSAHPFISNLHTRHTEKL 240
Query: 241 KKSLKVKTRSGRVSRPPKYKAKDYKFIKTEDLADGHLSDSDDYSELCVEEDEDQRERHAL 300
KKSLKVKTRSGRVSRPPKYKAKDYKFIKTEDLADGHLSDSDDYSELCVEEDEDQRERHAL
Sbjct: 241 KKSLKVKTRSGRVSRPPKYKAKDYKFIKTEDLADGHLSDSDDYSELCVEEDEDQRERHAL 300
Query: 301 FDLSSCSLRPKSFKCQTCEKSYIGKGGLARHFKLNPGHGQLDPEMVLSEKASGSTLRGCT 360
FDLSSCSLRPKSFKCQTCEKSYIGKGGLARHFKLNPGHGQLDPEMVLSEKASGSTLRGCT
Sbjct: 301 FDLSSCSLRPKSFKCQTCEKSYIGKGGLARHFKLNPGHGQLDPEMVLSEKASGSTLRGCT 360
Query: 361 EERTLSLTSLGLSMPADPCEGGARSCLVTESARGGLQNGQSVDVEETLPSEPENGALLRS 420
EERTLSLTSLGLSMPADPCEGGARSCLVTESARGGLQNGQSVDVEETLPSEPENGALLRS
Sbjct: 361 EERTLSLTSLGLSMPADPCEGGARSCLVTESARGGLQNGQSVDVEETLPSEPENGALLRS 420
Query: 421 ERYQGPRRRACSETLAESRTAVLQQRRAAQLPGGPAAAGEQRASPSKARLKEFLQQCDRE 480
ERYQGPRRRACSETLAESRTAVLQQRRAAQLPGGPAAAGEQRASPSKARLKEFLQQCDRE
Sbjct: 421 ERYQGPRRRACSETLAESRTAVLQQRRAAQLPGGPAAAGEQRASPSKARLKEFLQQCDRE 480
Query: 481 DLVELALPQLAQVVTVYEFLLMKVEKDHLAKPFFPAIYKEFEELHKMVKKMCQDYLSSSG 540
DLVELALPQLAQVVTVYEFLLMKVEKDHLAKPFFPAIYKEFEELHKMVKKMCQDYLSSSG
Sbjct: 481 DLVELALPQLAQVVTVYEFLLMKVEKDHLAKPFFPAIYKEFEELHKMVKKMCQDYLSSSG 540
Query: 541 LCSQETLEINNDKVAESLGITEFLRKKEIHPDNLGPKHLSRDMDGEQLEGASSEKREREA 600
LCSQETLEINNDKVAESLGITEFLRKKEIHPDNLGPKHLSRDMDGEQLEGASSEKREREA
Sbjct: 541 LCSQETLEINNDKVAESLGITEFLRKKEIHPDNLGPKHLSRDMDGEQLEGASSEKREREA 600
Query: 601 AEEGLASVKRPRREALSNDTTESLAANSRGREKPRPLHALAAGFSPPVNVTVSPRSEESH 660
AEEGLASVKRPRREALSNDTTESLAANSRGREKPRPLHALAAGFSPPVNVTVSPRSEESH
Sbjct: 601 AEEGLASVKRPRREALSNDTTESLAANSRGREKPRPLHALAAGFSPPVNVTVSPRSEESH 660
Query: 661 TTTVSGGNGSVFQAGPQLQALANLEARRGSIGAALSSRDVSGLPVYAQSGEPRRLTQAQV 720
TTTVSGGNGSVFQAGPQLQALANLEARRGSIGAALSSRDVSGLPVYAQSGEPRRLTQAQV
Sbjct: 661 TTTVSGGNGSVFQAGPQLQALANLEARRGSIGAALSSRDVSGLPVYAQSGEPRRLTQAQV 720
Query: 721 AAFPGENALEHSSDQDTWDSLRSPGFCSPLSSGGGAESLPPGGPGHAEAGHLGKVCDFHL 780
AAFPGENALEHSSDQDTWDSLRSPGFCSPLSSGGGAESLPPGGPGHAEAGHLGKVCDFHL
Sbjct: 721 AAFPGENALEHSSDQDTWDSLRSPGFCSPLSSGGGAESLPPGGPGHAEAGHLGKVCDFHL 780
Query: 781 NHQQPSPTSVLPTEVAAPPLEKILSVDSVAVDCAYRTVPKPGPQPGPHGSLLTEGCLRSL 840
NHQQPSPTSVLPTEVAAPPLEKILSVDSVAVDCAYRTVPKPGPQPGPHGSLLTEGCLRSL
Sbjct: 781 NHQQPSPTSVLPTEVAAPPLEKILSVDSVAVDCAYRTVPKPGPQPGPHGSLLTEGCLRSL 840
Query: 841 SGDLNRFPCGMEVHSGQRELESVVAVGEAMAFEISNGSHELLSQGQKQIFIQTSDGLILS 900
SGDLNRFPCGMEVHSGQRELESVVAVGEAMAFEISNGSHELLSQGQKQIFIQTSDGLILS
Sbjct: 841 SGDLNRFPCGMEVHSGQRELESVVAVGEAMAFEISNGSHELLSQGQKQIFIQTSDGLILS 900
Query: 901 PPGTIVSQEEDIVTVTDAEGRACGWAR 927
PPGTIVSQEEDIVTVTDAEGRACGWAR
Sbjct: 901 PPGTIVSQEEDIVTVTDAEGRACGWAR 927
>gi|239746767 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 238 bits (607), Expect = 2e-62
Identities = 124/152 (81%), Positives = 133/152 (87%), Gaps = 3/152 (1%)
Query: 253 VSRPPKYKAKDYKFIKTEDLADGHLSDSDDYSELCVEEDEDQRERHALFDLSSCSLRPKS 312
VSRP KYKAK +FIK +DLADGHL DSDD SE+ VEED QRER ALFDLSSCSLRPKS
Sbjct: 13 VSRPAKYKAKA-EFIKRDDLADGHLPDSDDDSEVSVEED--QRERQALFDLSSCSLRPKS 69
Query: 313 FKCQTCEKSYIGKGGLARHFKLNPGHGQLDPEMVLSEKASGSTLRGCTEERTLSLTSLGL 372
FKCQTC+KSYIGK GLA+HFKLNPGHGQLDPEMVLSEKA+GSTLRGCTEERTLSLT GL
Sbjct: 70 FKCQTCKKSYIGKWGLAQHFKLNPGHGQLDPEMVLSEKANGSTLRGCTEERTLSLTFPGL 129
Query: 373 SMPADPCEGGARSCLVTESARGGLQNGQSVDV 404
S+PA P EGGARSCLV ESARGGLQ G+ + V
Sbjct: 130 SVPAAPREGGARSCLVRESARGGLQAGRCMSV 161
>gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens]
Length = 317
Score = 145 bits (365), Expect = 2e-34
Identities = 74/90 (82%), Positives = 79/90 (87%), Gaps = 3/90 (3%)
Query: 96 QQLEAICVKVTSGETKGQERPMLLPTTIQPQTARKSQLPRGNSCLVGLHIASPQLLRVQP 155
+QLEAICVKVTSGETKGQERP L T+QPQ+AR+SQ PRGNS LVGLH+ SPQLLRVQP
Sbjct: 231 KQLEAICVKVTSGETKGQERPTSLLATVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQP 290
Query: 156 LVRTEPQSCFLSDLCQPPAQGFVQRPLPAL 185
LVRTEPQSCFL QPPAQGFVQRPLPAL
Sbjct: 291 LVRTEPQSCFLH---QPPAQGFVQRPLPAL 317
>gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens]
Length = 317
Score = 142 bits (357), Expect = 2e-33
Identities = 73/90 (81%), Positives = 78/90 (86%), Gaps = 3/90 (3%)
Query: 96 QQLEAICVKVTSGETKGQERPMLLPTTIQPQTARKSQLPRGNSCLVGLHIASPQLLRVQP 155
+QLEAICVKVTSGETKGQE P L T+QPQ+AR+SQ PRGNS LVGLH+ SPQLLRVQP
Sbjct: 231 KQLEAICVKVTSGETKGQEWPTSLLATVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQP 290
Query: 156 LVRTEPQSCFLSDLCQPPAQGFVQRPLPAL 185
LVRTEPQSCFL QPPAQGFVQRPLPAL
Sbjct: 291 LVRTEPQSCFLH---QPPAQGFVQRPLPAL 317
>gi|239746769 PREDICTED: similar to Serine/threonine-protein kinase
PRKX (Protein kinase PKX1) [Homo sapiens]
Length = 330
Score = 142 bits (357), Expect = 2e-33
Identities = 73/90 (81%), Positives = 78/90 (86%), Gaps = 3/90 (3%)
Query: 96 QQLEAICVKVTSGETKGQERPMLLPTTIQPQTARKSQLPRGNSCLVGLHIASPQLLRVQP 155
+QLEAICVKVTSGETKGQE P L T+QPQ+AR+SQ PRGNS LVGLH+ SPQLLRVQP
Sbjct: 244 KQLEAICVKVTSGETKGQEWPTSLLATVQPQSARQSQPPRGNSRLVGLHVTSPQLLRVQP 303
Query: 156 LVRTEPQSCFLSDLCQPPAQGFVQRPLPAL 185
LVRTEPQSCFL QPPAQGFVQRPLPAL
Sbjct: 304 LVRTEPQSCFLH---QPPAQGFVQRPLPAL 330
>gi|239757747 PREDICTED: similar to Serine/threonine-protein kinase
PRKX (Protein kinase PKX1) [Homo sapiens]
Length = 110
Score = 87.4 bits (215), Expect = 5e-17
Identities = 45/53 (84%), Positives = 47/53 (88%)
Query: 345 MVLSEKASGSTLRGCTEERTLSLTSLGLSMPADPCEGGARSCLVTESARGGLQ 397
MVLSEKA+GSTLRGCTEERTLSLT GLS+PA P EGGARSCLV ESAR GLQ
Sbjct: 1 MVLSEKANGSTLRGCTEERTLSLTFPGLSVPAAPREGGARSCLVRESARSGLQ 53
>gi|239757749 PREDICTED: hypothetical protein [Homo sapiens]
Length = 264
Score = 46.6 bits (109), Expect = 1e-04
Identities = 22/28 (78%), Positives = 24/28 (85%)
Query: 96 QQLEAICVKVTSGETKGQERPMLLPTTI 123
+QLEAICVKVTSGETKGQERP L T+
Sbjct: 237 KQLEAICVKVTSGETKGQERPTSLLATV 264
>gi|156415988 zinc finger and BTB domain containing 7B [Homo
sapiens]
Length = 539
Score = 43.9 bits (102), Expect = 7e-04
Identities = 46/142 (32%), Positives = 58/142 (40%), Gaps = 14/142 (9%)
Query: 7 EAGGGSEDGGGGGGPAPPGQSGSVARVAPLGPEQLRQVLEQVTKA--QPPPPPPPFVLRD 64
E GGG+ G GG G A G V + +GPE L +LE A P VL+
Sbjct: 65 EGGGGAVMGAGGSGTATGGAGAGVCELDFVGPEALGALLEFAYTATLTTSSANMPAVLQ- 123
Query: 65 AARRLRDAAQQAA---LQRGRGTEPPRLPR---LLPPQQLEAICVKVTSGETKGQERPML 118
AAR L AA + +G G E P Q LEA SG G++ P
Sbjct: 124 AARLLEIPCVIAACMEILQGSGLEAPSPDEDDCERARQYLEAFATATASGVPNGEDSPPQ 183
Query: 119 LPTTIQP-----QTARKSQLPR 135
+P P AR+S+ PR
Sbjct: 184 VPLPPPPPPPPRPVARRSRKPR 205
>gi|239752951 PREDICTED: similar to kruppel-related zinc finger
protein hcKrox isoform 3 [Homo sapiens]
Length = 573
Score = 43.9 bits (102), Expect = 7e-04
Identities = 46/142 (32%), Positives = 58/142 (40%), Gaps = 14/142 (9%)
Query: 7 EAGGGSEDGGGGGGPAPPGQSGSVARVAPLGPEQLRQVLEQVTKA--QPPPPPPPFVLRD 64
E GGG+ G GG G A G V + +GPE L +LE A P VL+
Sbjct: 99 EGGGGAVMGAGGSGTATGGAGAGVCELDFVGPEALGALLEFAYTATLTTSSANMPAVLQ- 157
Query: 65 AARRLRDAAQQAA---LQRGRGTEPPRLPR---LLPPQQLEAICVKVTSGETKGQERPML 118
AAR L AA + +G G E P Q LEA SG G++ P
Sbjct: 158 AARLLEIPCVIAACMEILQGSGLEAPSPDEDDCERARQYLEAFATATASGVPNGEDSPPQ 217
Query: 119 LPTTIQP-----QTARKSQLPR 135
+P P AR+S+ PR
Sbjct: 218 VPLPPPPPPPPRPVARRSRKPR 239
>gi|239752949 PREDICTED: similar to kruppel-related zinc finger
protein hcKrox isoform 1 [Homo sapiens]
Length = 539
Score = 43.9 bits (102), Expect = 7e-04
Identities = 46/142 (32%), Positives = 58/142 (40%), Gaps = 14/142 (9%)
Query: 7 EAGGGSEDGGGGGGPAPPGQSGSVARVAPLGPEQLRQVLEQVTKA--QPPPPPPPFVLRD 64
E GGG+ G GG G A G V + +GPE L +LE A P VL+
Sbjct: 65 EGGGGAVMGAGGSGTATGGAGAGVCELDFVGPEALGALLEFAYTATLTTSSANMPAVLQ- 123
Query: 65 AARRLRDAAQQAA---LQRGRGTEPPRLPR---LLPPQQLEAICVKVTSGETKGQERPML 118
AAR L AA + +G G E P Q LEA SG G++ P
Sbjct: 124 AARLLEIPCVIAACMEILQGSGLEAPSPDEDDCERARQYLEAFATATASGVPNGEDSPPQ 183
Query: 119 LPTTIQP-----QTARKSQLPR 135
+P P AR+S+ PR
Sbjct: 184 VPLPPPPPPPPRPVARRSRKPR 205
>gi|239752947 PREDICTED: similar to kruppel-related zinc finger
protein hcKrox isoform 2 [Homo sapiens]
Length = 539
Score = 43.9 bits (102), Expect = 7e-04
Identities = 46/142 (32%), Positives = 58/142 (40%), Gaps = 14/142 (9%)
Query: 7 EAGGGSEDGGGGGGPAPPGQSGSVARVAPLGPEQLRQVLEQVTKA--QPPPPPPPFVLRD 64
E GGG+ G GG G A G V + +GPE L +LE A P VL+
Sbjct: 65 EGGGGAVMGAGGSGTATGGAGAGVCELDFVGPEALGALLEFAYTATLTTSSANMPAVLQ- 123
Query: 65 AARRLRDAAQQAA---LQRGRGTEPPRLPR---LLPPQQLEAICVKVTSGETKGQERPML 118
AAR L AA + +G G E P Q LEA SG G++ P
Sbjct: 124 AARLLEIPCVIAACMEILQGSGLEAPSPDEDDCERARQYLEAFATATASGVPNGEDSPPQ 183
Query: 119 LPTTIQP-----QTARKSQLPR 135
+P P AR+S+ PR
Sbjct: 184 VPLPPPPPPPPRPVARRSRKPR 205
>gi|66932986 filamin-binding LIM protein-1 isoform b [Homo sapiens]
Length = 374
Score = 43.1 bits (100), Expect = 0.001
Identities = 47/185 (25%), Positives = 65/185 (35%), Gaps = 29/185 (15%)
Query: 14 DGGGGGGPAPPGQSGSVARVAPLGPEQL--------------RQVLEQVTKAQPPPPPPP 59
+ G G P+P G A P P QL VL + PPPPPPP
Sbjct: 53 EAGLAGRPSPWTTPGRAAATVPAAPMQLFNGGCPPPPPVLDGEDVLPDLDLLPPPPPPPP 112
Query: 60 FVL--RDAARRLRDAAQQAALQRGRGTEPPRLPRLLPPQQLEAICVKVTSGETKGQERPM 117
+L + A A+ A L++ + PP PP Q A V G + E +
Sbjct: 113 VLLPSEEEAPAPMGASLIADLEQLHLSPPP------PPPQAPAEGPSVQPGPLRPMEEEL 166
Query: 118 LLPTTIQPQTARKSQLPRGNSCLVGLHIASPQLLRVQPLVRTEPQSCFLSDLC--QPPAQ 175
P + + + C SP+ L V+ + R CF C Q Q
Sbjct: 167 PPPPAEPVEKGASTDI-----CAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQ 221
Query: 176 GFVQR 180
F Q+
Sbjct: 222 SFYQK 226
>gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens]
Length = 373
Score = 43.1 bits (100), Expect = 0.001
Identities = 47/185 (25%), Positives = 65/185 (35%), Gaps = 29/185 (15%)
Query: 14 DGGGGGGPAPPGQSGSVARVAPLGPEQL--------------RQVLEQVTKAQPPPPPPP 59
+ G G P+P G A P P QL VL + PPPPPPP
Sbjct: 53 EAGLAGRPSPWTTPGRAAATVPAAPMQLFNGGCPPPPPVLDGEDVLPDLDLLPPPPPPPP 112
Query: 60 FVL--RDAARRLRDAAQQAALQRGRGTEPPRLPRLLPPQQLEAICVKVTSGETKGQERPM 117
+L + A A+ A L++ + PP PP Q A V G + E +
Sbjct: 113 VLLPSEEEAPAPMGASLIADLEQLHLSPPP------PPPQAPAEGPSVQPGPLRPMEEEL 166
Query: 118 LLPTTIQPQTARKSQLPRGNSCLVGLHIASPQLLRVQPLVRTEPQSCFLSDLC--QPPAQ 175
P + + + C SP+ L V+ + R CF C Q Q
Sbjct: 167 PPPPAEPVEKGASTDI-----CAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQ 221
Query: 176 GFVQR 180
F Q+
Sbjct: 222 SFYQK 226
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 42.7 bits (99), Expect = 0.002
Identities = 54/211 (25%), Positives = 80/211 (37%), Gaps = 15/211 (7%)
Query: 19 GGPA--PPGQSGSVARVAPLGPEQLRQVLEQVTKAQPPPPPPPFVLRDAARR------LR 70
GGPA PP A +P G V+ K P P V R+ A
Sbjct: 1380 GGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATP----VTREGAATPSKGDLTP 1435
Query: 71 DAAQQAALQRGRGTEPPRLPRLLPPQQLEAICVKVTSGETKGQERPMLLPTTIQPQTARK 130
A +L++ T P+ P + + VT K P + T+ P+ A
Sbjct: 1436 PAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPA 1495
Query: 131 SQLPRGNSCLVGLHIASPQLLRVQPLVRTEPQSCFLSDLC-QPPAQGFVQRPL--PALQV 187
+ P G L + +SP+ + P R +P + + L + PA + L PA+ V
Sbjct: 1496 TPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTV 1555
Query: 188 VPAKRVPAPKAPDEQGSMLTPLSASDPLAVT 218
K+ PA P E + + AS P AVT
Sbjct: 1556 PSPKKTPAIPTPKEAPATPSSKEASSPPAVT 1586
Score = 31.2 bits (69), Expect = 4.7
Identities = 52/226 (23%), Positives = 67/226 (29%), Gaps = 41/226 (18%)
Query: 2 ADAEPEAGGGSEDGGGGGGP-----APPGQSGSVARVAPLGPEQLRQVLEQVTKAQPPPP 56
A P GG G P PP G A P G K P P
Sbjct: 1268 AATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTP 1327
Query: 57 PPPFVLRDAARRLRDAAQQAALQRGRGTEPPRLPRLLP--------PQQLEAICVKVTSG 108
PP + A A+ P LP P P E +
Sbjct: 1328 PP-----------KGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATP 1376
Query: 109 ETKGQERPMLLPTTIQPQTARKSQLPRGNSCLVGLHIASPQLLRVQPLVRTEPQSCFLSD 168
KG P + P + P+ P+G+ + SP+ P+ R + D
Sbjct: 1377 SHKG--GPAMTPPS--PKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGD 1432
Query: 169 LCQPPAQGFVQRPLPALQVVPAKRVPAPKAPDEQGSMLTPLSASDP 214
L PA+ V K+ PA AP +G TP S DP
Sbjct: 1433 LTP-----------PAVTPVSLKKAPATSAP--KGGPATPSSKGDP 1465
>gi|53831997 suppressor of cytokine signaling 7 [Homo sapiens]
Length = 581
Score = 42.0 bits (97), Expect = 0.003
Identities = 63/239 (26%), Positives = 87/239 (36%), Gaps = 30/239 (12%)
Query: 4 AEPEAGGGSEDGGGGG-------GPAPPGQSGSVARVAPLGPEQLRQVLEQVTKAQPPPP 56
+E E GGGGG GP P + + PLG + +Q + PPPP
Sbjct: 133 SEEELSSPGRGGGGGGRLLLQPPGPELPPVPFPLQDLVPLGRLSRGEQQQQQQQQPPPPP 192
Query: 57 PPPFVLRDAARRLRDAAQQAALQR---------GRGTEPPRLPRLLPPQQLEAICVKVTS 107
PPP LR A R + + L R G G R P +L A +T
Sbjct: 193 PPPGPLRPLAGPSRKGSFKIRLSRLFRTKSCNGGSGGGDGTGKR--PSGELAASAASLTD 250
Query: 108 -GETKGQE-----RPMLLPTTIQPQTARKSQLPRGNS-CLVGLHIASPQLLRVQPLVRTE 160
G + G+E +P L T S L G + LV + I+ L P
Sbjct: 251 MGGSAGRELDAGRKPKLTRTQSAFSPVSFSPLFTGETVSLVDVDISQRGLTSPHPPTPPP 310
Query: 161 P---QSCFLSDLCQPPAQGFVQRPL-PALQVVPAKRVPAPKAPDEQGSMLTPLSASDPL 215
P L D+ + P+ +LQ P P P APD + P+ A++ L
Sbjct: 311 PPRRSLSLLDDISGTLPTSVLVAPMGSSLQSFPLPPPPPPHAPD-AFPRIAPIRAAESL 368
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 41.6 bits (96), Expect = 0.003
Identities = 34/156 (21%), Positives = 65/156 (41%), Gaps = 11/156 (7%)
Query: 55 PPPPPFVLRDAARRLRDAAQQAALQRGRGTEPPRLPRLLPPQ-------QLEAICVKVTS 107
PPPP + + ++ +++ ++ + T+ P + + + PQ Q E I VKV +
Sbjct: 9175 PPPPKVIKKPVIEKIEKTSRRMEEEKVQVTKVPEVSKKIVPQKPSRTPVQEEVIEVKVPA 9234
Query: 108 GETK----GQERPMLLPTTIQPQTARKSQLPRGNSCLVGLHIASPQLLRVQPLVRTEPQS 163
TK +E+ T + + ++ + +H+A + + P V P+
Sbjct: 9235 VHTKKMVISEEKMFFASHTEEEVSVTVPEVQKEIVTEEKIHVAISKRVEPPPKVPELPEK 9294
Query: 164 CFLSDLCQPPAQGFVQRPLPALQVVPAKRVPAPKAP 199
++ P V+ P P + VP K VP K P
Sbjct: 9295 PAPEEVAPVPIPKKVEPPAPKVPEVPKKPVPEEKKP 9330
Score = 33.9 bits (76), Expect = 0.72
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Query: 35 PLGPEQLRQVLEQVTKAQPPPPPPPFVLRDAARRLRDAAQQAALQRGRGTEPPRLPRLLP 94
P PE + + + K +PPPPPP D ++ Q A+ + + E P++
Sbjct: 10863 PKEPEPEKVIEKPKLKPRPPPPPPAPPKEDVKEKI---FQLKAIPKKKVPEKPQV----- 10914
Query: 95 PQQLEAICVKVTSGETK 111
P+++E +KV GE K
Sbjct: 10915 PEKVELTPLKVPGGEKK 10931
Score = 30.8 bits (68), Expect = 6.1
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
Query: 95 PQQLEAICVKVTSGETKGQER-PMLLPTTIQPQTARKSQLPRGNSCLVGLHIASPQLLRV 153
P++ EA KV K +E+ P+L+P +P A+ ++P+ + + P+ +
Sbjct: 9968 PKKKEAPPAKVPEVPKKPEEKVPVLIPKKEKPPPAKVPEVPKKPVPEEKVPVPVPKKVEA 10027
Query: 154 QPLVRTE-PQSCFLSDLCQPPAQGFVQRPLPALQVVPAKRVPAPKAP 199
P E P+ PA V+ P + VP K +P K P
Sbjct: 10028 PPAKVPEVPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKP 10074
Score = 30.8 bits (68), Expect = 6.1
Identities = 44/165 (26%), Positives = 70/165 (42%), Gaps = 32/165 (19%)
Query: 46 EQVTKAQPPPP--PPPFVLRDAARRLRDAAQQAALQRGRGTEPPRLPRLLPPQQLEAICV 103
++V +A PP P PPP V +A ++ ++ PP+ P + P + EA
Sbjct: 10564 KKVPEAIPPKPESPPPEV--------PEAPKEVVPEKKVPAAPPKKPEVTPVKVPEAPKE 10615
Query: 104 KVTSGETK--GQERPMLLPTTIQ--PQTA-RKSQLPRGNSCLVGLHIASPQLLRVQPLVR 158
V + ++P + PT + P+ A + ++P P+ P V
Sbjct: 10616 VVPEKKVPVPPPKKPEVPPTKVPEVPKVAVPEKKVPEA---------IPPKPESPPPEVF 10666
Query: 159 TEPQSCFLSDLCQPPAQGFVQRPLPA----LQVVPAKRVPAPKAP 199
EP+ L + PPA+ V+ P PA + V P K VP KAP
Sbjct: 10667 EEPEEVALEE---PPAE-VVEEPEPAAPPQVTVPPKKPVPEKKAP 10707
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 39.7 bits (91), Expect = 0.013
Identities = 57/213 (26%), Positives = 70/213 (32%), Gaps = 48/213 (22%)
Query: 9 GGGSEDGGGGGGP-------APPGQSGSVARVAPLGPEQLRQVLEQVTKAQPPPPPPPFV 61
GGG GGGGG +PP G P+GP Q P PPPPP
Sbjct: 13 GGGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPGP-----GQSGPKPPIPPPPPH- 66
Query: 62 LRDAARRLRDAAQQAALQRGRGTEPPRLPRLLPPQQLEAICVKVTSGETKGQERPMLLPT 121
++ + QQ Q+ +PP P+ P QQ Q+ P
Sbjct: 67 ----QQQQQPPPQQPPPQQPPPHQPPPHPQ--PHQQ---------------QQPPP---- 101
Query: 122 TIQPQTARKSQLPRGNSCLVGLHIASPQLLRVQPLVRTEPQSCFLSDLCQPPAQGFVQRP 181
PQ + K + +G G+ A P P T P S PP G P
Sbjct: 102 --PPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPA--TPPTSG------APPGSGPGPTP 151
Query: 182 LPALQVVPAKRVPAPKAPDEQGSMLTPLSASDP 214
P V A P P G TP A P
Sbjct: 152 TPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGP 184
Score = 32.0 bits (71), Expect = 2.7
Identities = 23/57 (40%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 6 PEAGGGSEDGGGGGGPAPPGQSGSVARVAPLGP-EQLRQVLEQVTKAQPPPP--PPP 59
P G G G GP P GQSG + P P +Q +Q Q Q PPP PPP
Sbjct: 34 PPPGMGLNQNRGPMGPGP-GQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPP 89
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 39.3 bits (90), Expect = 0.017
Identities = 62/240 (25%), Positives = 87/240 (36%), Gaps = 43/240 (17%)
Query: 2 ADAEPEAGGG-----SEDGGGGGGP-APPGQSGSVARVAPLGPEQLRQVLEQVTKA-QPP 54
A P AGGG S P + P +SG AR P P Q + +A +PP
Sbjct: 224 ARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPP 283
Query: 55 PPPPPFVLRDAARRLRD-AAQQAALQRGRGTEPPRLPRLLPPQQLEAICVKVTSGETKGQ 113
PP +DAA L ++ A GT+ +P PP
Sbjct: 284 QVTPP--RKDAAPALGPLSSSPLATPSPSGTKARPVP---PPDNAATP------------ 326
Query: 114 ERPMLLPTTIQPQTARKSQLPRGNSCLVGLHIASPQLLRVQPLVRTEPQSCFLSDLCQPP 173
LP T+ P + LP L ++P L+ P P S + PP
Sbjct: 327 -----LPATLPPSPPLATPLP-----LAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPP 376
Query: 174 AQGFVQRPLPALQVVPAKRVPAPKAPDEQGSMLTPLSASDPLAVTSLSS---SSAHPFIS 230
Q P+LQ +P +VP + +PL+ S A TSL S + H F++
Sbjct: 377 MQA-----PPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLT 431
Score = 35.8 bits (81), Expect = 0.19
Identities = 50/212 (23%), Positives = 78/212 (36%), Gaps = 11/212 (5%)
Query: 21 PAPPGQSGSVARVAPLGPEQLRQVLEQVTKAQPPPPPPPFVLRDAARRLRDAAQQAALQR 80
P+PP S ++ +A P+ + + +A PPP P V + +A
Sbjct: 634 PSPPA-SPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPP 692
Query: 81 GRGTEPPRLPRLLPPQQLEAICVKVTSGETKGQERPMLLPTTIQPQTARKSQLPRGNSCL 140
+ P L P A S Q P L +Q + + P S
Sbjct: 693 SQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSAT 752
Query: 141 VGLHIASPQLLRVQPLV--RTEPQSCFLSDLCQPPAQGFVQRPLPALQVVPAKRVPAPKA 198
+ P LL PL + P S +S L +PP Q PAL P + +P+P A
Sbjct: 753 PPPRV--PPLLAAPPLQVPPSPPASLPMSPLAKPPPQA-----PPALATPPLQALPSPPA 805
Query: 199 PDEQGSMLTPLSASDPLAVTSLSSSSAHPFIS 230
+ +P SAS P++ + A P ++
Sbjct: 806 SFPGQAPFSP-SASLPMSPLATPPPQAPPVLA 836
Score = 34.7 bits (78), Expect = 0.42
Identities = 63/248 (25%), Positives = 88/248 (35%), Gaps = 47/248 (18%)
Query: 4 AEPEAGGGSEDGGGGGGPAP-----PGQSGSVARVAPLGPEQLRQVLEQVT---KAQPPP 55
+ P A G E +P PG++ R PLG + LR E+ KA P
Sbjct: 92 SRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAP 151
Query: 56 ---------------PPPPFVLRDAARRLRDAAQQAALQRGRGTEPPRLPRLLPPQQLEA 100
P P ARR R A + L R + PR P P + + +
Sbjct: 152 KRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSS 211
Query: 101 ICVKVTSGETKGQERPMLLPTTIQPQTARKSQLPRGNS-CLVGLHIASPQLLRVQPLVRT 159
T+ + R +P Q P S ++SP R P R
Sbjct: 212 ASEHSTTEPSPAARR--------RPSAGGGLQRPASRSLSSSATPLSSP--ARSGPSARG 261
Query: 160 EPQSCFLSDLCQPPAQGFVQRPLPALQVVPAKRVPAPKAPDEQGSMLTPLSASDPLAVTS 219
P++ + QP +G + L QV P ++ AP L PLS+S PLA S
Sbjct: 262 TPRA--PAHPSQPKPKGL--QALRPPQVTPPRKDAAP--------ALGPLSSS-PLATPS 308
Query: 220 LSSSSAHP 227
S + A P
Sbjct: 309 PSGTKARP 316
>gi|100913211 heat shock transcription factor 4 isoform a [Homo
sapiens]
Length = 462
Score = 39.3 bits (90), Expect = 0.017
Identities = 36/122 (29%), Positives = 48/122 (39%), Gaps = 22/122 (18%)
Query: 704 PVYAQSGEPRRLTQAQV--AAFPGENALEHSSDQDTWDSLRSPGFCSPLSSGG------- 754
P + QS L+Q Q+ A G A + Q T LR PGF P+ +G
Sbjct: 238 PYFIQSPSTYSLSQRQIWALALTGPGAPSSLTSQKTLHPLRGPGFLPPVMAGAPPPLPVA 297
Query: 755 -------GAESLPPGGPGHA---EAGHLGKVCD---FHLNHQQPSPTSVLPTEVAAPPLE 801
G S P GP +A E G ++ D L SP S+LP + PP E
Sbjct: 298 VVQAILEGKGSFSPEGPRNAQQPEPGDPREIPDRGPLGLESGDRSPESLLPPMLLQPPQE 357
Query: 802 KI 803
+
Sbjct: 358 SV 359
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 39.3 bits (90), Expect = 0.017
Identities = 56/196 (28%), Positives = 75/196 (38%), Gaps = 26/196 (13%)
Query: 42 RQVLEQVTKAQPPPPPPPFVLRDAARRLRDAAQQAALQRGRGTEPPRLPRLLPPQQLEAI 101
R+VL +V A PPP P V R L Q Q GR PR L +
Sbjct: 971 RRVLLEVATAPDPPPRPKPVKMKVNRML----QPVPKQEGRTVVVVNNPR----APLGPV 1022
Query: 102 CVKVTSG-ETKGQERPMLLPTTIQPQTARKSQLPRGNSCLVGLHIASPQLL-RVQPLVRT 159
V+ G E Q P +P + P + S P G + P LL +QP +
Sbjct: 1023 PVRPPPGPELSAQPTPGPVPQVL-PASLMVSASPAGPPLIPASRPPGPVLLPPLQPNSGS 1081
Query: 160 EPQSC-----FLSDLCQPPAQGFVQRPLPALQVVPAKRVPAPKAPDEQGSMLTPLSAS-- 212
PQ LS +PP +P P P + PAP P S+L PL+
Sbjct: 1082 LPQVLPSPLGVLSGTSRPPTPTLSLKPTPP---APVRLSPAP--PPGSSSLLKPLTVPPG 1136
Query: 213 ---DPLAVTSLSSSSA 225
P A T+ S+++A
Sbjct: 1137 YTFPPAAATTTSTTTA 1152
Score = 37.0 bits (84), Expect = 0.085
Identities = 57/221 (25%), Positives = 75/221 (33%), Gaps = 35/221 (15%)
Query: 21 PAPPGQSGSVARVAPL-----GPEQLRQVLEQVTKAQPPPPPPPFVLRDAARRLRDAAQQ 75
PAP ++ APL GP L V + P P PP + A +
Sbjct: 1448 PAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGA-----SPSA 1502
Query: 76 AALQRGRGTEP-------PRLPRLLPPQQLEAICVKVTSGETKGQERPMLLPTTI--QPQ 126
+AL G T P P P LL P + T P+L+P + P
Sbjct: 1503 SALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACS---PVLVPASALASPF 1559
Query: 127 TARKSQLPRGNSCLVGLHIASPQLLRVQPLVRTEPQSCFLSDLCQPPAQGFVQRPLPALQ 186
+ + P S L AS Q L PQ+ L+ PP PLP L
Sbjct: 1560 PSAPNPAPAQASLLAPASSAS-QALATPLAPMAAPQTAILAPSPAPPLA-----PLPVL- 1612
Query: 187 VVPAKRVPAPKAPDEQGSMLTPLSASDPLAVTSLSSSSAHP 227
P+P A S TP+ P + S +SA P
Sbjct: 1613 ------APSPGAAPVLASSQTPVPVMAPSSTPGTSLASASP 1647
Score = 33.5 bits (75), Expect = 0.94
Identities = 56/220 (25%), Positives = 78/220 (35%), Gaps = 35/220 (15%)
Query: 21 PAPPGQSGSVARV----APLGPEQLRQVLEQVTKAQPPPPPPPFVLRDAARRLRDAAQQA 76
P P + +V V APLGP +R AQP P P P VL + A
Sbjct: 1000 PVPKQEGRTVVVVNNPRAPLGPVPVRPPPGPELSAQPTPGPVPQVLPASLMVSASPAGPP 1059
Query: 77 ALQRGRGTEPPRLPRLLPPQQLEAICVKVTSGETKGQERPMLLPTTIQPQTARKSQL--- 133
+ R P LP L P + G G RP +++P +L
Sbjct: 1060 LIPASRPPGPVLLPPLQPNSGSLPQVLPSPLGVLSGTSRPPTPTLSLKPTPPAPVRLSPA 1119
Query: 134 -PRGNSCLVGLHIASPQLLRVQPLVRTEPQSCFLSDLCQPPAQGFVQRPLPALQVVPAKR 192
P G+S L ++PL P F PPA A A
Sbjct: 1120 PPPGSSSL------------LKPLT-VPPGYTF------PPAAATTTSTTTATATTTA-- 1158
Query: 193 VPAPKAPDEQGSMLTP-----LSASDPLAVTSLSSSSAHP 227
VPAP P Q +L+P L + + +++ L+S + P
Sbjct: 1159 VPAP-TPAPQRLILSPDMQARLPSGEVVSIGQLASLAQRP 1197
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 38.9 bits (89), Expect = 0.022
Identities = 51/211 (24%), Positives = 74/211 (35%), Gaps = 31/211 (14%)
Query: 24 PGQSGSVARVAPLGPEQLRQVLEQVTKAQPPPPPPPFVLRDAARRLRDAAQQAALQR--- 80
P SVAR P + QV PP PPP + A + R+A QQ L R
Sbjct: 1880 PAGFPSVARTQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQIEREAQQQQHLYRVNI 1939
Query: 81 GRGTEPPRLPRLLPPQQLEAICVKV-TSGETKGQERPMLLPTTIQ----PQTARKSQLPR 135
P R P Q+ + + V + G P + P Q PQ LPR
Sbjct: 1940 NNSMPPGRTGMGTPGSQMAPVSLNVPRPNQVSGPVMPSMPPGQWQQAPLPQQQPMPGLPR 1999
Query: 136 G-NSCLVGLHIASPQLLRVQPLVRTEPQSCFLSDLCQPPAQGFVQRPLPALQVVPAKRVP 194
S +A P++ VQP P + L DL + +
Sbjct: 2000 PVISMQAQAAVAGPRMPSVQPPRSISPSA--LQDL--------------------LRTLK 2037
Query: 195 APKAPDEQGSMLTPLSASDPLAVTSLSSSSA 225
+P +P +Q +L L ++ L + +A
Sbjct: 2038 SPSSPQQQQQVLNILKSNPQLMAAFIKQRTA 2068
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 38.9 bits (89), Expect = 0.022
Identities = 51/211 (24%), Positives = 74/211 (35%), Gaps = 31/211 (14%)
Query: 24 PGQSGSVARVAPLGPEQLRQVLEQVTKAQPPPPPPPFVLRDAARRLRDAAQQAALQR--- 80
P SVAR P + QV PP PPP + A + R+A QQ L R
Sbjct: 1918 PAGFPSVARTQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQIEREAQQQQHLYRVNI 1977
Query: 81 GRGTEPPRLPRLLPPQQLEAICVKV-TSGETKGQERPMLLPTTIQ----PQTARKSQLPR 135
P R P Q+ + + V + G P + P Q PQ LPR
Sbjct: 1978 NNSMPPGRTGMGTPGSQMAPVSLNVPRPNQVSGPVMPSMPPGQWQQAPLPQQQPMPGLPR 2037
Query: 136 G-NSCLVGLHIASPQLLRVQPLVRTEPQSCFLSDLCQPPAQGFVQRPLPALQVVPAKRVP 194
S +A P++ VQP P + L DL + +
Sbjct: 2038 PVISMQAQAAVAGPRMPSVQPPRSISPSA--LQDL--------------------LRTLK 2075
Query: 195 APKAPDEQGSMLTPLSASDPLAVTSLSSSSA 225
+P +P +Q +L L ++ L + +A
Sbjct: 2076 SPSSPQQQQQVLNILKSNPQLMAAFIKQRTA 2106
>gi|4504733 insulin receptor substrate 4 [Homo sapiens]
Length = 1257
Score = 38.5 bits (88), Expect = 0.029
Identities = 20/52 (38%), Positives = 23/52 (44%)
Query: 8 AGGGSEDGGGGGGPAPPGQSGSVARVAPLGPEQLRQVLEQVTKAQPPPPPPP 59
+GGG GGG G + G G R L L Q + Q PPPPPP
Sbjct: 582 SGGGKNSGGGKGSGSGKGSDGDGERGKSLKKRSYFGKLTQSKQQQMPPPPPP 633
>gi|5174545 myocyte enhancer factor 2D [Homo sapiens]
Length = 521
Score = 38.5 bits (88), Expect = 0.029
Identities = 67/245 (27%), Positives = 92/245 (37%), Gaps = 38/245 (15%)
Query: 10 GGSEDGGGGGGPAPPGQSGSVARVAP-LGPEQLRQVLEQVTKAQPPPPPPPFVLRDAARR 68
GG + G P+P G AR +P L P L +V A+ PPPP A R
Sbjct: 207 GGDLNSANGACPSPVGNGYVSARASPGLLPVANGNSLNKVIPAKSPPPPTHSTQLGAPSR 266
Query: 69 LRDAAQQAALQRGRGT---------EPPRLPRLLPPQQLEAICVKVTSGETKG------- 112
D + Q G+G + RL Q ++ V S T
Sbjct: 267 KPDL-RVITSQAGKGLMHHLTEDHLDLNNAQRLGVSQSTHSLTTPVVSVATPSLLSQGLP 325
Query: 113 -QERPMLLPTTIQPQTARKSQLPRGNSCLVGLHIASPQLLRVQPLVRTEPQSCFLSDLCQ 171
P T Q +A S LP +S GL + + + QP +PQ Q
Sbjct: 326 FSSMPTAYNTDYQLTSAELSSLPAFSSP-GGLSLGNVTAWQ-QPQQPQQPQQP------Q 377
Query: 172 PPAQGFVQRPLPALQVVPAKRVPAPKAPDEQGSMLTPLSASD-----PLA-VTSLSSSSA 225
PP Q Q P P Q ++ P+ P +Q S L P+S S+ PL V + + +
Sbjct: 378 PPQQ---QPPQP--QQPQPQQPQQPQQPPQQQSHLVPVSLSNLIPGSPLPHVGAALTVTT 432
Query: 226 HPFIS 230
HP IS
Sbjct: 433 HPHIS 437
>gi|4885433 mitogen-activated protein kinase 8 interacting protein 1
[Homo sapiens]
Length = 711
Score = 38.5 bits (88), Expect = 0.029
Identities = 31/96 (32%), Positives = 38/96 (39%), Gaps = 13/96 (13%)
Query: 754 GGAESLPPGGPGHAEAGHLGKVCD--------FHLNHQQPSPTSVLPTEVAAPPLEKILS 805
GG + PPGG GH+ + D +L Q P + PT PP E +S
Sbjct: 249 GGPPAAPPGGRGHSHRDRIHYQADVRLEATEEIYLTPVQRPPDAAEPTSAFLPPTESRMS 308
Query: 806 VDSVAVDCAYRTVPKPGPQPGPHGSLLTEG--CLRS 839
V S AY P +P P S EG CL S
Sbjct: 309 VSSDPDPAAY---PSTAGRPHPSISEEEEGFDCLSS 341
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 38.5 bits (88), Expect = 0.029
Identities = 46/181 (25%), Positives = 71/181 (39%), Gaps = 27/181 (14%)
Query: 23 PPGQSGSVARVAP---LGPEQLRQVLEQVTKAQPPPP-PPPFVLRDAARRLRDAAQQAAL 78
PPG S++ P L P L + A PPP PPP + A + ++
Sbjct: 575 PPGMPPSLSSAGPPPVLPPPSL-------SSAGPPPVLPPPSLSSTAPPPVMPLPPLSSA 627
Query: 79 QRGRGTEPPRLPRLLPPQQLEAICVKVTSGETK---GQERPMLLPTTIQ----PQTARKS 131
G PP +P+ +PPQ A +S ++ + RP LLPT + P T
Sbjct: 628 TPPPGIPPPGVPQGIPPQLTAAPVPPASSSQSSQVPEKPRPALLPTPVSFGSAPPTTYHP 687
Query: 132 QLPRGNSCLVGLHIASPQLLRVQPLVRTE-PQSCFLSDLCQPPAQGFVQRPLPALQVVPA 190
L S Q+ PL ++ P S F SD + +P+ A++ +P
Sbjct: 688 PLQSAG--------PSEQVNSKAPLSKSALPYSSFSSDQGLGESSAAPSQPITAVKDMPV 739
Query: 191 K 191
+
Sbjct: 740 R 740
>gi|4502565 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 37.7 bits (86), Expect = 0.050
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 8 AGGGSEDGGGGGGPAPPGQSGSVARVAPLGPEQLRQVLEQVTKAQPPPPPP 58
AGGG GGGGGG G G+ R+ LG + + E + P PPPP
Sbjct: 36 AGGGGGGGGGGGGGGGGGGGGTAMRI--LG-GVISAISEAAAQYNPEPPPP 83
>gi|51599151 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 37.7 bits (86), Expect = 0.050
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 8 AGGGSEDGGGGGGPAPPGQSGSVARVAPLGPEQLRQVLEQVTKAQPPPPPP 58
AGGG GGGGGG G G+ R+ LG + + E + P PPPP
Sbjct: 36 AGGGGGGGGGGGGGGGGGGGGTAMRI--LG-GVISAISEAAAQYNPEPPPP 83
>gi|194294548 hsp70-interacting protein [Homo sapiens]
Length = 359
Score = 37.4 bits (85), Expect = 0.065
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 8/91 (8%)
Query: 4 AEPEAGGGSEDGGGGGGPAPPGQSGSVARVAPLGPEQLRQVLEQ-VTKAQPPPPPPPFVL 62
A P A G GGGGGG + G S P L+ +L+ +T P PPP +
Sbjct: 14 ALPPASQGCSSGGGGGGSSAGGSGNS------RPPRNLQGLLQMAITAGSEEPDPPPEPM 67
Query: 63 RDAARRLRDAAQQAALQRGRGTEPPRLPRLL 93
+ R+ A AA RG+ E ++ L
Sbjct: 68 SEERRQWLQEAMSAAF-RGQREEVEQMKSCL 97
>gi|112363070 hsp70-interacting protein [Homo sapiens]
Length = 359
Score = 37.4 bits (85), Expect = 0.065
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 8/91 (8%)
Query: 4 AEPEAGGGSEDGGGGGGPAPPGQSGSVARVAPLGPEQLRQVLEQ-VTKAQPPPPPPPFVL 62
A P A G GGGGGG + G S P L+ +L+ +T P PPP +
Sbjct: 14 ALPPASQGCSSGGGGGGSSAGGSGNS------RPPRNLQGLLQMAITAGSEEPDPPPEPM 67
Query: 63 RDAARRLRDAAQQAALQRGRGTEPPRLPRLL 93
+ R+ A AA RG+ E ++ L
Sbjct: 68 SEERRQWLQEAMSAAF-RGQREEVEQMKSCL 97
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.131 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,493,488
Number of Sequences: 37866
Number of extensions: 2484749
Number of successful extensions: 24123
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 374
Number of HSP's that attempted gapping in prelim test: 20957
Number of HSP's gapped (non-prelim): 3163
length of query: 927
length of database: 18,247,518
effective HSP length: 112
effective length of query: 815
effective length of database: 14,006,526
effective search space: 11415318690
effective search space used: 11415318690
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.