FNDC1 4733

Name: FNDC1	Sequence: fasta or formatted (1894aa)		NCBI GI: 148806908
Description: fibronectin type III domain containing 1		Referenced in: Fibronectin Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 154 3 C cysteine 0.4 8 1 D aspartate 5.3 101 3 E glutamate 5.5 105 3 F phenylalanine 2.0 37 2 G glycine 7.4 141 2 H histidine 3.0 56 2 I isoleucine 2.6 49 2 K lysine 4.6 88 2 L leucine 6.7 127 4 M methionine 0.8 16 2 N asparagine 2.5 48 1 P proline 11.2 213 4 Q glutamine 4.0 75 3 R arginine 7.9 150 2 S serine 10.9 207 3 T threonine 7.1 135 6 V valine 6.0 113 2 W tryptophan 1.1 20 1 Y tyrosine 2.7 51 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 fibronectin type III domain containing 1 ABI3BP 0.076 ABI gene family, member 3 (NESH) binding protein [Ho... NEO1 0.034 neogenin homolog 1 DCC 0.033 deleted in colorectal carcinoma SRRM2 0.019 splicing coactivator subunit SRm300 IGDCC4 0.019 immunoglobulin superfamily, DCC subclass, member 4 [... PRTG 0.018 protogenin PRG4 0.017 proteoglycan 4 isoform B PRG4 0.017 proteoglycan 4 isoform A PRG4 0.016 proteoglycan 4 isoform D PRG4 0.016 proteoglycan 4 isoform C NACA 0.016 nascent polypeptide-associated complex alpha subuni... TCOF1 0.015 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.015 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.015 Treacher Collins-Franceschetti syndrome 1 isoform a ... TCOF1 0.015 Treacher Collins-Franceschetti syndrome 1 isoform c ... MUC12 0.014 PREDICTED: mucin 12 SRRM1 0.014 serine/arginine repetitive matrix 1 PTPRD 0.014 protein tyrosine phosphatase, receptor type, D isofo... TRIOBP 0.014 TRIO and F-actin binding protein isoform 6 PTPRD 0.014 protein tyrosine phosphatase, receptor type, D isofor... PTPRD 0.014 protein tyrosine phosphatase, receptor type, D isofo... FLJ22184 0.014 PREDICTED: hypothetical protein LOC80164 TCOF1 0.013 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.013 Treacher Collins-Franceschetti syndrome 1 isoform b ... MUC2 0.013 mucin 2 precursor LOC100133756 0.013 PREDICTED: hypothetical protein, partial NOLC1 0.013 nucleolar and coiled-body phosphoprotein 1 SPEN 0.013 spen homolog, transcriptional regulator APC2 0.013 adenomatosis polyposis coli 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.