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Search of human proteins with 144953882
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|144953882 hypothetical protein LOC54838 isoform 1 [Homo
sapiens]
(363 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|144953882 hypothetical protein LOC54838 isoform 1 [Homo sapiens] 778 0.0
gi|144953880 hypothetical protein LOC54838 isoform 2 [Homo sapiens] 724 0.0
gi|23503229 WW domain binding protein 1 [Homo sapiens] 174 8e-44
gi|146134388 YLP motif containing 1 [Homo sapiens] 45 8e-05
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 44 3e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 41 0.001
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 41 0.001
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 41 0.001
gi|11386183 WAS protein family, member 2 [Homo sapiens] 40 0.002
gi|28557729 hypothetical protein LOC283687 [Homo sapiens] 40 0.004
gi|59806357 submaxillary gland androgen regulated protein 3 homo... 39 0.006
gi|79750944 ubiquitin specific peptidase 42 [Homo sapiens] 39 0.007
gi|209180481 Cas-Br-M (murine) ecotropic retroviral transforming... 39 0.007
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 39 0.007
gi|228008410 BEN domain containing 4 isoform b [Homo sapiens] 39 0.009
gi|148762950 BEN domain containing 4 isoform a [Homo sapiens] 39 0.009
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 39 0.009
gi|178557734 microtubule-associated protein tau isoform 6 [Homo ... 38 0.012
gi|188536047 SWI/SNF-related matrix-associated actin-dependent r... 38 0.012
gi|55956910 meningioma 1 [Homo sapiens] 38 0.012
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 38 0.016
gi|38176300 nestin [Homo sapiens] 37 0.021
gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithora... 37 0.021
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 37 0.021
gi|7706501 WW domain binding protein 11 [Homo sapiens] 37 0.021
gi|17864090 autism susceptibility candidate 2 isoform 1 [Homo sa... 37 0.028
gi|14249622 ajuba isoform 1 [Homo sapiens] 37 0.028
gi|157168329 formin 1 [Homo sapiens] 37 0.036
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 37 0.036
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 37 0.036
>gi|144953882 hypothetical protein LOC54838 isoform 1 [Homo sapiens]
Length = 363
Score = 778 bits (2009), Expect = 0.0
Identities = 363/363 (100%), Positives = 363/363 (100%)
Query: 1 MERRRLLGGMALLLLQALPSPLSARAEPPQDKEACVGTNNQSYICDTGHCCGQSQCCNYY 60
MERRRLLGGMALLLLQALPSPLSARAEPPQDKEACVGTNNQSYICDTGHCCGQSQCCNYY
Sbjct: 1 MERRRLLGGMALLLLQALPSPLSARAEPPQDKEACVGTNNQSYICDTGHCCGQSQCCNYY 60
Query: 61 YELWWFWLVWTIIIILSCCCVCHHRRAKHRLQAQQRQHEINLIAYREAHNYSALPFYFRF 120
YELWWFWLVWTIIIILSCCCVCHHRRAKHRLQAQQRQHEINLIAYREAHNYSALPFYFRF
Sbjct: 61 YELWWFWLVWTIIIILSCCCVCHHRRAKHRLQAQQRQHEINLIAYREAHNYSALPFYFRF 120
Query: 121 LPNYLLPPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSS 180
LPNYLLPPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSS
Sbjct: 121 LPNYLLPPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSS 180
Query: 181 PLSEPSRSSTRPPSIADPDPSDLPVDRAATKAPGMEPSGSVAGLGELDPGAFLDKDAECR 240
PLSEPSRSSTRPPSIADPDPSDLPVDRAATKAPGMEPSGSVAGLGELDPGAFLDKDAECR
Sbjct: 181 PLSEPSRSSTRPPSIADPDPSDLPVDRAATKAPGMEPSGSVAGLGELDPGAFLDKDAECR 240
Query: 241 EELLKDDSSEHGAPDSKEKTPGRHRRFTGDSGIEVCVCNRGHHDDDLKEFNTLIDDALDG 300
EELLKDDSSEHGAPDSKEKTPGRHRRFTGDSGIEVCVCNRGHHDDDLKEFNTLIDDALDG
Sbjct: 241 EELLKDDSSEHGAPDSKEKTPGRHRRFTGDSGIEVCVCNRGHHDDDLKEFNTLIDDALDG 300
Query: 301 PLDFCDSCHVRPPGDEEEGLCQSSEEQAREPGHPHLPRPPACLLLNTINEQDSPNSQSSS 360
PLDFCDSCHVRPPGDEEEGLCQSSEEQAREPGHPHLPRPPACLLLNTINEQDSPNSQSSS
Sbjct: 301 PLDFCDSCHVRPPGDEEEGLCQSSEEQAREPGHPHLPRPPACLLLNTINEQDSPNSQSSS 360
Query: 361 SPS 363
SPS
Sbjct: 361 SPS 363
>gi|144953880 hypothetical protein LOC54838 isoform 2 [Homo sapiens]
Length = 342
Score = 724 bits (1868), Expect = 0.0
Identities = 334/334 (100%), Positives = 334/334 (100%)
Query: 30 QDKEACVGTNNQSYICDTGHCCGQSQCCNYYYELWWFWLVWTIIIILSCCCVCHHRRAKH 89
QDKEACVGTNNQSYICDTGHCCGQSQCCNYYYELWWFWLVWTIIIILSCCCVCHHRRAKH
Sbjct: 9 QDKEACVGTNNQSYICDTGHCCGQSQCCNYYYELWWFWLVWTIIIILSCCCVCHHRRAKH 68
Query: 90 RLQAQQRQHEINLIAYREAHNYSALPFYFRFLPNYLLPPYEEVVNRPPTPPPPYSAFQLQ 149
RLQAQQRQHEINLIAYREAHNYSALPFYFRFLPNYLLPPYEEVVNRPPTPPPPYSAFQLQ
Sbjct: 69 RLQAQQRQHEINLIAYREAHNYSALPFYFRFLPNYLLPPYEEVVNRPPTPPPPYSAFQLQ 128
Query: 150 QQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSEPSRSSTRPPSIADPDPSDLPVDRAA 209
QQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSEPSRSSTRPPSIADPDPSDLPVDRAA
Sbjct: 129 QQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSEPSRSSTRPPSIADPDPSDLPVDRAA 188
Query: 210 TKAPGMEPSGSVAGLGELDPGAFLDKDAECREELLKDDSSEHGAPDSKEKTPGRHRRFTG 269
TKAPGMEPSGSVAGLGELDPGAFLDKDAECREELLKDDSSEHGAPDSKEKTPGRHRRFTG
Sbjct: 189 TKAPGMEPSGSVAGLGELDPGAFLDKDAECREELLKDDSSEHGAPDSKEKTPGRHRRFTG 248
Query: 270 DSGIEVCVCNRGHHDDDLKEFNTLIDDALDGPLDFCDSCHVRPPGDEEEGLCQSSEEQAR 329
DSGIEVCVCNRGHHDDDLKEFNTLIDDALDGPLDFCDSCHVRPPGDEEEGLCQSSEEQAR
Sbjct: 249 DSGIEVCVCNRGHHDDDLKEFNTLIDDALDGPLDFCDSCHVRPPGDEEEGLCQSSEEQAR 308
Query: 330 EPGHPHLPRPPACLLLNTINEQDSPNSQSSSSPS 363
EPGHPHLPRPPACLLLNTINEQDSPNSQSSSSPS
Sbjct: 309 EPGHPHLPRPPACLLLNTINEQDSPNSQSSSSPS 342
>gi|23503229 WW domain binding protein 1 [Homo sapiens]
Length = 269
Score = 174 bits (442), Expect = 8e-44
Identities = 101/270 (37%), Positives = 125/270 (46%), Gaps = 62/270 (22%)
Query: 25 RAEPPQDKEACVGTNNQSYICDTGHCCGQSQCCNYYYELWWFWLVWTIIIILSCCCVCHH 84
RA Q +E C G NNQ Y+C++GHCCG++ CC YYYELWWFWL+WT++I+ SCCC H
Sbjct: 18 RAPQQQLRELCPGVNNQPYLCESGHCCGETGCCTYYYELWWFWLLWTVLILFSCCCAFRH 77
Query: 85 RRAKHRLQAQQRQHEINLIAYREA-HNYSALP----FYFRFLPNYLLPPYEEVVNRPPTP 139
RRAK RLQ QQRQ EINL+AY A H P RFL + P YE+VV+RP TP
Sbjct: 78 RRAKLRLQQQQRQREINLLAYHGACHGAGPFPTGSLLDLRFLSTFKPPAYEDVVHRPGTP 137
Query: 140 PPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSEPSRSSTRPPSIADPD 199
PPPY+ A PL+ S + S
Sbjct: 138 PPPYTV-------------------------------APGRPLTASSEQTCCSSS----- 161
Query: 200 PSDLPVDRAATKAPGMEPSGSVAGLGELDPGAFLDKDAECREELLKDDSSEHGAPDSKEK 259
S P T G+ S E +PGA G +
Sbjct: 162 -SSCPAHFEGTNVEGVSSHQSAPPHQEGEPGA--------------------GVTPASTP 200
Query: 260 TPGRHRRFTGDSGIEVCVCNRGHHDDDLKE 289
R+RR TGDSGIE+C C + +KE
Sbjct: 201 PSCRYRRLTGDSGIELCPCPASGEGEPVKE 230
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 45.4 bits (106), Expect = 8e-05
Identities = 37/113 (32%), Positives = 46/113 (40%), Gaps = 21/113 (18%)
Query: 121 LPNYLLPPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSS 180
LP ++PP PP PPP ++PP P PPG+ P+ S G
Sbjct: 542 LPPPVMPPALPATVPPPGMPPP----------VMPPSL-PTSVPPPGMPPSLSSAG-PPP 589
Query: 181 PLSEPSRSSTRPP---------SIADPDPSDLPVDRAATKAPGMEPSGSVAGL 224
L PS SS PP S A P LP +AT PG+ P G G+
Sbjct: 590 VLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSATPPPGIPPPGVPQGI 642
Score = 38.9 bits (89), Expect = 0.007
Identities = 30/91 (32%), Positives = 37/91 (40%), Gaps = 9/91 (9%)
Query: 136 PPTPPPPYSAFQLQQQQLLPPQ-CGPAGGSPPGIDPTRGSQGAQSSPL-----SEPSRSS 189
PP PPPP A Q+QQ Q PPG+ P +S P+ PS+S
Sbjct: 105 PPMPPPPGPALSYQKQQQYKHQMLHHQRDGPPGLVPMELESPPESPPVPPGSYMPPSQSY 164
Query: 190 TRPPSIADPDPSDLPVDRAATKAPGMEPSGS 220
PP P PS P + P +PS S
Sbjct: 165 MPPP---QPPPSYYPPTSSQPYLPPAQPSPS 192
Score = 32.0 bits (71), Expect = 0.89
Identities = 30/96 (31%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 122 PNYLLPPYEEVVNRPPT-PPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQG--AQ 178
P L PP PP PPP S+ LPP PPGI P QG Q
Sbjct: 588 PPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSAT--PPPGIPPPGVPQGIPPQ 645
Query: 179 SSPLSEPSRSSTRPPSIAD-PDPSDLPVDRAATKAP 213
+ P SS++ + + P P+ LP + AP
Sbjct: 646 LTAAPVPPASSSQSSQVPEKPRPALLPTPVSFGSAP 681
Score = 30.0 bits (66), Expect = 3.4
Identities = 40/160 (25%), Positives = 54/160 (33%), Gaps = 28/160 (17%)
Query: 131 EVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQ----GAQSSPLSEP- 185
E+ + P +PP P ++ Q +PP PP P SQ AQ SP P
Sbjct: 142 ELESPPESPPVPPGSYMPPSQSYMPPP-----QPPPSYYPPTSSQPYLPPAQPSPSQSPP 196
Query: 186 -----------SRSSTRPPSIADPDPSDLPVDRAATKAPGMEPSGS---VAGLGELDPGA 231
S SS+ S S LP +A+ P S S PG
Sbjct: 197 SQSYLAPTPSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPPPPSAPPGN 256
Query: 232 FLDKDAECREELLKDDSSEH----GAPDSKEKTPGRHRRF 267
E E K+ S+E PD TP +++
Sbjct: 257 KTTVQQEPLESGAKNKSTEQQQAAPEPDPSTMTPQEQQQY 296
Score = 30.0 bits (66), Expect = 3.4
Identities = 38/126 (30%), Positives = 49/126 (38%), Gaps = 35/126 (27%)
Query: 95 QRQHEINLIAYREAHNYSALPFYFRFLPNY--------LLPPYEEVV----NRPPTPPPP 142
QRQHEI L A +E + + ++ LPP E + +RP PPP
Sbjct: 1450 QRQHEIILKAAQELKMLREQKEQLQKMKDFGSEPQMADHLPPQESRLQNTSSRPGMYPPP 1509
Query: 143 YSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSEPSRSS---TRPPSIADPD 199
S PP P G PPG + P + P+RSS TRPP P
Sbjct: 1510 GS--------YRPP---PPMGKPPG---------SIVRPSAPPARSSVPVTRPPVPIPPP 1549
Query: 200 PSDLPV 205
P P+
Sbjct: 1550 PPPPPL 1555
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 43.5 bits (101), Expect = 3e-04
Identities = 36/117 (30%), Positives = 45/117 (38%), Gaps = 15/117 (12%)
Query: 127 PPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSP------PGIDPTRGSQGAQSS 180
PP P PPPP S P + P GG P P + R S+ ++
Sbjct: 762 PPGPAPAAASPGPPPPASPPGAPASPRAP-RTSPYGGLPAAPLAGPALPARRLSRASRPL 820
Query: 181 PLSEPS--------RSSTRPPSIADPDPSDLPVDRAATKAPGMEPSGSVAGLGELDP 229
S+PS +STRP S + P P RAA +P S S G LDP
Sbjct: 821 SASQPSLPHGAPGPAASTRPASSSTPRLGPTPAARAAAPSPDRRDSASPGAAGGLDP 877
Score = 33.5 bits (75), Expect = 0.31
Identities = 23/62 (37%), Positives = 25/62 (40%), Gaps = 16/62 (25%)
Query: 136 PPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSEPSRSSTRPPSI 195
PP PPPP QQQ PP P PPG P +P P R+ PP
Sbjct: 22 PPPPPPPAPP----QQQPPPP---PPPAPPPGPGP---------APPQHPPRAEALPPEA 65
Query: 196 AD 197
AD
Sbjct: 66 AD 67
Score = 28.9 bits (63), Expect = 7.5
Identities = 34/146 (23%), Positives = 48/146 (32%), Gaps = 39/146 (26%)
Query: 127 PPYEEVVNRPPTPPP--------PYSAFQLQQQQLLPPQC----GPAG------------ 162
PP +PP PPP P + + LPP+ GP G
Sbjct: 26 PPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEAADEGGPRGRLRSRDSSCGRP 85
Query: 163 GSPPGIDPTRGSQGAQ-------------SSPLSEPSRSSTRPPSIADPDPSDLPVDRAA 209
G+P +GS + P P S + + + P P P + A
Sbjct: 86 GTPGAASTAKGSPNGECGRGEPQCSPAGPEGPARGPKVSFSCRGAASGPAPGPGPAEEAG 145
Query: 210 TK--APGMEPSGSVAGLGELDPGAFL 233
++ P EP GS A + GA L
Sbjct: 146 SEEAGPAGEPRGSQASFMQRQFGALL 171
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 41.2 bits (95), Expect = 0.001
Identities = 36/115 (31%), Positives = 45/115 (39%), Gaps = 21/115 (18%)
Query: 127 PPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSP------------PGIDPTRGS 174
PP PP PPP +A LQ + PPQ PA +P PG P S
Sbjct: 489 PPMSPSATPPPQAPPPLAAPPLQLAKP-PPQAPPALATPPLQALPSPPASFPGQAPFSPS 547
Query: 175 QGAQSSPLSEPSRSSTRPPSIA------DPDPSDLPVDRAATKAPGMEPSGSVAG 223
SPL+ P + PP +A P P P +A + P P SV+G
Sbjct: 548 ASLPMSPLATPPPQA--PPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSG 600
Score = 32.3 bits (72), Expect = 0.68
Identities = 27/96 (28%), Positives = 34/96 (35%), Gaps = 3/96 (3%)
Query: 122 PNYLLPPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSP 181
PN L + PP PP + F + P P +PP + Q S P
Sbjct: 428 PNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSL-AAPPLQVPPSPP 486
Query: 182 LSEPSRSSTRPPSIADPDPSDLPVDRAATKAPGMEP 217
S P S PP A P + P+ A K P P
Sbjct: 487 ASPPMSPSATPPPQAPPPLAAPPLQLA--KPPPQAP 520
Score = 30.4 bits (67), Expect = 2.6
Identities = 27/109 (24%), Positives = 33/109 (30%), Gaps = 2/109 (1%)
Query: 127 PPYEEVVNRPPTPP--PPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSE 184
PP V P +PP PP S Q P P PP + + + P
Sbjct: 442 PPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQA 501
Query: 185 PSRSSTRPPSIADPDPSDLPVDRAATKAPGMEPSGSVAGLGELDPGAFL 233
P + P +A P P P P S G P A L
Sbjct: 502 PPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASL 550
Score = 28.5 bits (62), Expect = 9.8
Identities = 29/123 (23%), Positives = 39/123 (31%), Gaps = 30/123 (24%)
Query: 135 RPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGID-----PTRGSQGAQSSPLSEPSRS- 188
RPPT P S + P PA P P S + ++PLS P+RS
Sbjct: 199 RPPTEGPRKSVSSASEHSTTEPS--PAARRRPSAGGGLQRPASRSLSSSATPLSSPARSG 256
Query: 189 ----------------------STRPPSIADPDPSDLPVDRAATKAPGMEPSGSVAGLGE 226
+ RPP + P P + +P PS S A +
Sbjct: 257 PSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQ 316
Query: 227 LDP 229
P
Sbjct: 317 APP 319
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 41.2 bits (95), Expect = 0.001
Identities = 36/115 (31%), Positives = 45/115 (39%), Gaps = 21/115 (18%)
Query: 127 PPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSP------------PGIDPTRGS 174
PP PP PPP +A LQ + PPQ PA +P PG P S
Sbjct: 450 PPMSPSATPPPQAPPPLAAPPLQLAKP-PPQAPPALATPPLQALPSPPASFPGQAPFSPS 508
Query: 175 QGAQSSPLSEPSRSSTRPPSIA------DPDPSDLPVDRAATKAPGMEPSGSVAG 223
SPL+ P + PP +A P P P +A + P P SV+G
Sbjct: 509 ASLPMSPLATPPPQA--PPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSG 561
Score = 32.3 bits (72), Expect = 0.68
Identities = 27/96 (28%), Positives = 34/96 (35%), Gaps = 3/96 (3%)
Query: 122 PNYLLPPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSP 181
PN L + PP PP + F + P P +PP + Q S P
Sbjct: 389 PNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSL-AAPPLQVPPSPP 447
Query: 182 LSEPSRSSTRPPSIADPDPSDLPVDRAATKAPGMEP 217
S P S PP A P + P+ A K P P
Sbjct: 448 ASPPMSPSATPPPQAPPPLAAPPLQLA--KPPPQAP 481
Score = 32.0 bits (71), Expect = 0.89
Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 17/89 (19%)
Query: 137 PTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSEPSRSSTRPPSIA 196
P+ P P L+ Q+ PP+ A P + P SSPL+ PS S A
Sbjct: 260 PSQPKPKGLQALRPPQVTPPRKDAA----PALGPL------SSSPLATPSPS-------A 302
Query: 197 DPDPSDLPVDRAATKAPGMEPSGSVAGLG 225
P PS P + P PS + LG
Sbjct: 303 PPSPSAPPSLQTLPSPPATPPSQATTSLG 331
Score = 30.4 bits (67), Expect = 2.6
Identities = 27/109 (24%), Positives = 33/109 (30%), Gaps = 2/109 (1%)
Query: 127 PPYEEVVNRPPTPP--PPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSE 184
PP V P +PP PP S Q P P PP + + + P
Sbjct: 403 PPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQA 462
Query: 185 PSRSSTRPPSIADPDPSDLPVDRAATKAPGMEPSGSVAGLGELDPGAFL 233
P + P +A P P P P S G P A L
Sbjct: 463 PPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASL 511
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 41.2 bits (95), Expect = 0.001
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 137 PTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTR-GSQGAQSSPLSEPSRSSTRPPSI 195
P PPPP + P A +PP P + G + +++PL+ P + PP++
Sbjct: 131 PAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAV 190
Query: 196 ADP-DPSDLPVDRAATKAPGMEP 217
A P P P A + P + P
Sbjct: 191 APPAGPRRAPPPAVAAREPPLPP 213
Score = 35.0 bits (79), Expect = 0.10
Identities = 23/61 (37%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Query: 127 PPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSEPS 186
PP PP PPPP QQQQ PPQ P PP R A+ L E
Sbjct: 200 PPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQP----PPEGGAVRAGGAARPVSLREVV 255
Query: 187 R 187
R
Sbjct: 256 R 256
Score = 30.4 bits (67), Expect = 2.6
Identities = 60/244 (24%), Positives = 84/244 (34%), Gaps = 60/244 (24%)
Query: 136 PPTPPPPYSAFQLQQQQLL--PPQCGPAGGSPPGIDPTRGSQ-------GAQSSPLSEPS 186
PP+P P + Q+ L PP PA +PP + P G + A+ PL P
Sbjct: 159 PPSPGPAQPGPRAQRAAPLAAPP---PAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPP 215
Query: 187 RSSTRPPSIADPDPS-DLPVDRAATKAPGMEP-----------SGSVAGLGELDPG---A 231
+ P P P P + A +A G GS G L G
Sbjct: 216 QPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARPVSLREVVRYLGGSGGAGGRLTRGRVQG 275
Query: 232 FLDKDAECREEL---------LKDDSSEHGAPDSKEKTPGRHRRFTGDSGIEVCVCNRGH 282
L+++A R L L AP + P R +R G E V +
Sbjct: 276 LLEEEAAARGRLERTRLGALALPRGDRPGRAPPAASARPSRSKR-----GGEERVLEKEE 330
Query: 283 HDDDLKEFNTLIDDALDGPLDFCDSCHV----RPPGDEEEGL-----CQSSEEQARE--P 331
+DD D+ D D + V RP G + L QS++E+ +E P
Sbjct: 331 EEDD--------DEDEDEEDDVSEGSEVPESDRPAGAQHHQLNGERGPQSAKERVKEWTP 382
Query: 332 GHPH 335
PH
Sbjct: 383 CGPH 386
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 40.4 bits (93), Expect = 0.002
Identities = 28/97 (28%), Positives = 36/97 (37%), Gaps = 10/97 (10%)
Query: 127 PPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGS-------QGAQS 179
PP+ + PP PPPP + + PP P GG+PP P GA
Sbjct: 356 PPHPDFAAPPPPPPPPAADYPTLPP---PPLSQPTGGAPPPPPPPPPPGPPPPPFTGADG 412
Query: 180 SPLSEPSRSSTRPPSIADPDPSDLPVDRAATKAPGME 216
P P S T P + P SD D + G +
Sbjct: 413 QPAIPPPLSDTTKPKSSLPAVSDARSDLLSAIRQGFQ 449
Score = 33.1 bits (74), Expect = 0.40
Identities = 31/118 (26%), Positives = 39/118 (33%), Gaps = 11/118 (9%)
Query: 127 PPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSEPS 186
PP P TPPPP PP A PP P PLS+P+
Sbjct: 335 PPPPVGFGSPGTPPPP-------SPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPT 387
Query: 187 RSSTRPPSIADPDPSDLPVDRAATKAPGMEPSGSVAGLGELDPGAFLDKDAECREELL 244
+ PP P P A P + P S P + L ++ R +LL
Sbjct: 388 GGAPPPPPPPPPPGPPPPPFTGADGQPAIPPPLS----DTTKPKSSLPAVSDARSDLL 441
Score = 32.0 bits (71), Expect = 0.89
Identities = 24/83 (28%), Positives = 27/83 (32%), Gaps = 20/83 (24%)
Query: 122 PNYLLPPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSP 181
P + PP PP PPPP +PP P G PG P S P
Sbjct: 314 PGFAPPP------APPPPPPPMIG--------IPPPPPPVGFGSPGTPPP------PSPP 353
Query: 182 LSEPSRSSTRPPSIADPDPSDLP 204
P PP P +D P
Sbjct: 354 SFPPHPDFAAPPPPPPPPAADYP 376
Score = 28.5 bits (62), Expect = 9.8
Identities = 31/93 (33%), Positives = 37/93 (39%), Gaps = 19/93 (20%)
Query: 131 EVVNRPPTPPPPYS------AFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSE 184
E V+ PPPP S + + L PP PA S P +D RGS L+
Sbjct: 239 ENVDASSYPPPPQSDSASSPSPSFSEDNLPPP---PAEFSYP-VDNQRGSG------LAG 288
Query: 185 PSRSSTRPPSIADPDPSDLPVDRAATKAPGMEP 217
P RSS PS P P P+ PG P
Sbjct: 289 PKRSSVVSPSHPPPAP---PLGSPPGPKPGFAP 318
>gi|28557729 hypothetical protein LOC283687 [Homo sapiens]
Length = 130
Score = 39.7 bits (91), Expect = 0.004
Identities = 35/125 (28%), Positives = 48/125 (38%), Gaps = 17/125 (13%)
Query: 141 PPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSEPSRSSTRPPSIADPDP 200
P Y A + +LLP P+G + P +P R P S +S S+ P P
Sbjct: 17 PAYKA--VSHLRLLPTANSPSGSNQP-TNPNRAQH--PEGPQSREGATSPVLASLEPPTP 71
Query: 201 SDLPVDRAATKAPGMEPSGSVAGLGELDPGAFLDKDAECREELLKDDSSEHGAPDSKEKT 260
+DLP RA + P E PG +L K +L+D G P
Sbjct: 72 TDLPSARARPRVP-----------AESGPG-WLHKARRPTRGILRDVLRHRGVPAQPRPA 119
Query: 261 PGRHR 265
PG H+
Sbjct: 120 PGAHQ 124
>gi|59806357 submaxillary gland androgen regulated protein 3 homolog
A precursor [Homo sapiens]
Length = 134
Score = 39.3 bits (90), Expect = 0.006
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 122 PNYLLPPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSP 181
P L PPY PP+PPPPY ++Q LPP GP PP P G P
Sbjct: 64 PPPLSPPYGPG-RIPPSPPPPYGPGRIQSHS-LPPPYGPGYPQPPS-QPRPYPPGPPFFP 120
Query: 182 LSEPSRSSTRPPSIADPDP 200
++ P+ P++ P P
Sbjct: 121 VNSPT-----DPALPTPAP 134
>gi|79750944 ubiquitin specific peptidase 42 [Homo sapiens]
Length = 1316
Score = 38.9 bits (89), Expect = 0.007
Identities = 40/136 (29%), Positives = 58/136 (42%), Gaps = 18/136 (13%)
Query: 138 TPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSEPS-----RSSTRP 192
+P PP + + +Q LL P+G S GA + P+ + P
Sbjct: 856 SPAPPARSEEPCEQPLL---VHPSGDHARDAQDPSQSLGAPEAAERPPAPVLDMAPAGHP 912
Query: 193 PSIADPDPSDLPVDRAATKAPGMEPS-GSVAGLGELDPGAFLDKDAECREELLKDDSSEH 251
A+P P + D AA KAPG P+ + L ++D G + + RE SS
Sbjct: 913 EGDAEPSPGERVEDAAAPKAPGPSPAKEKIGSLRKVDRGHYRSR----RER----SSSGE 964
Query: 252 GAPDSKEKTPG-RHRR 266
A +S+ KT G RHRR
Sbjct: 965 PARESRSKTEGHRHRR 980
Score = 32.3 bits (72), Expect = 0.68
Identities = 41/164 (25%), Positives = 55/164 (33%), Gaps = 34/164 (20%)
Query: 127 PPYEEVVNRPPTPPP------PYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSS 180
PP + P P P +A L + PP P G+P G+ A +
Sbjct: 742 PPEDRDAEPQPGSPAAESLEEPDAAAGLSSTKKAPPPRDP--GTPA---TKEGAWEAMAV 796
Query: 181 PLSEPSRSS-------TRPPSIADP-----DPSDLPVDRAATKAPGMEPSGSVAGLGELD 228
EP S+ T PP + DP D S L D A G S L
Sbjct: 797 APEEPPPSAGEDIVGDTAPPDLCDPGSLTGDASPLSQDAKGMIAEGPRDSALAEAPEGLS 856
Query: 229 PGAFLDKDAECREELLKDDSSEH-----------GAPDSKEKTP 261
P + C + LL S +H GAP++ E+ P
Sbjct: 857 PAPPARSEEPCEQPLLVHPSGDHARDAQDPSQSLGAPEAAERPP 900
>gi|209180481 Cas-Br-M (murine) ecotropic retroviral transforming
sequence-like 1 [Homo sapiens]
Length = 491
Score = 38.9 bits (89), Expect = 0.007
Identities = 36/126 (28%), Positives = 48/126 (38%), Gaps = 26/126 (20%)
Query: 122 PNYLLPPYEEVVNRPPTPP--------PPYSAF--QLQQQQLLPPQCGPAGGSPPGIDPT 171
P++++PP + PP PP PP +A L Q PP P +PP I P
Sbjct: 331 PHHIMPPQQHYAPPPPPPPPISHPMPHPPQAAGTPHLVYSQAPPP---PMTSAPPPITPP 387
Query: 172 RGSQGAQSSPL------SEPSRSSTRPPSIADP----DPSDLP---VDRAATKAPGMEPS 218
G AQ P P PP A P +P+ LP D+ P +P
Sbjct: 388 PGHIIAQMPPYMNHPPPGPPPPQHGGPPVTAPPPHHYNPNSLPQFTEDQGTLSPPFTQPG 447
Query: 219 GSVAGL 224
G G+
Sbjct: 448 GMSPGI 453
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 38.9 bits (89), Expect = 0.007
Identities = 33/96 (34%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Query: 127 PPYEEVVNRPPT-PPPPYSAFQLQQQQLLPPQ--CGPAGGSPPGIDPTRGS--QGAQSSP 181
PP + +PP PPP+ QQQ PPQ P PG P GS + S+P
Sbjct: 73 PPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAP 132
Query: 182 LSEPSRSSTRPPSIADPDPSDLPVDRAATKAPGMEP 217
+ P S P S P P+ P A T AP P
Sbjct: 133 PATPPTSGAPPGSGPGPTPTPPP---AVTSAPPGAP 165
Score = 37.7 bits (86), Expect = 0.016
Identities = 30/95 (31%), Positives = 38/95 (40%), Gaps = 9/95 (9%)
Query: 135 RPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSEPSRSSTRPPS 194
+PP PPPP QQQ PP P PP P Q Q P + S++P
Sbjct: 57 KPPIPPPPP-----HQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVV 111
Query: 195 IADPDPSD--LPVDRAATKAPGMEP--SGSVAGLG 225
P P+ A++ AP P SG+ G G
Sbjct: 112 AQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSG 146
Score = 29.3 bits (64), Expect = 5.8
Identities = 30/121 (24%), Positives = 38/121 (31%), Gaps = 30/121 (24%)
Query: 122 PNYLLPPYEEVVNRPPTPPPPYSAFQLQQQQ--------------------LLPPQCGPA 161
P + PP+ + + PPPP + + Q PP G
Sbjct: 83 PPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAP 142
Query: 162 GGSPPGIDPTRGSQGAQSSPLSEP-----SRSSTRPPSIADPDPSDLPVDRAATKAPGME 216
GS PG PT + P + P S T PP P P AA PG
Sbjct: 143 PGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPP-----AAVPGPGPG 197
Query: 217 P 217
P
Sbjct: 198 P 198
>gi|228008410 BEN domain containing 4 isoform b [Homo sapiens]
Length = 441
Score = 38.5 bits (88), Expect = 0.009
Identities = 39/137 (28%), Positives = 53/137 (38%), Gaps = 22/137 (16%)
Query: 105 YREAHNYSALPFYFRFLP----NYLLPPYEEV--VNRPPTPPP---PYSAFQLQQQQLLP 155
Y++ YS L + P Y P E+ V PP PPP P++A + + P
Sbjct: 18 YKQRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRAPPPPPPPFAPHAAVSISSSEPPP 77
Query: 156 PQCGPAGGSPPGIDPTRGSQGA-QSSPLSEPSRSSTRPPSIADPDPSDLPVDRAATKAPG 214
Q PPG P R + A SSP P+ S + A P P+ +P
Sbjct: 78 QQFQAQSSYPPG--PGRAAAAASSSSPSCTPATSQGHLRTPAQPPPA----------SPA 125
Query: 215 MEPSGSVAGLGELDPGA 231
S S A + PGA
Sbjct: 126 ASSSSSFAAVVRYGPGA 142
>gi|148762950 BEN domain containing 4 isoform a [Homo sapiens]
Length = 534
Score = 38.5 bits (88), Expect = 0.009
Identities = 39/137 (28%), Positives = 53/137 (38%), Gaps = 22/137 (16%)
Query: 105 YREAHNYSALPFYFRFLP----NYLLPPYEEV--VNRPPTPPP---PYSAFQLQQQQLLP 155
Y++ YS L + P Y P E+ V PP PPP P++A + + P
Sbjct: 18 YKQRSPYSVLKTFPSKRPALAKRYERPTLVELPHVRAPPPPPPPFAPHAAVSISSSEPPP 77
Query: 156 PQCGPAGGSPPGIDPTRGSQGA-QSSPLSEPSRSSTRPPSIADPDPSDLPVDRAATKAPG 214
Q PPG P R + A SSP P+ S + A P P+ +P
Sbjct: 78 QQFQAQSSYPPG--PGRAAAAASSSSPSCTPATSQGHLRTPAQPPPA----------SPA 125
Query: 215 MEPSGSVAGLGELDPGA 231
S S A + PGA
Sbjct: 126 ASSSSSFAAVVRYGPGA 142
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 38.5 bits (88), Expect = 0.009
Identities = 29/89 (32%), Positives = 35/89 (39%), Gaps = 15/89 (16%)
Query: 125 LLPPYEEVVNRPPTPPPP-------YSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGA 177
LLP VV + P PPPP S FQ Q Q L P P SPP QG
Sbjct: 308 LLPTQPPVVPQAPPPPPPPPQQQPIRSLFQPQPLQPLLPVQHPHHPSPP--------QGM 359
Query: 178 QSSPLSEPSRSSTRPPSIADPDPSDLPVD 206
P E R PP + P ++ ++
Sbjct: 360 HMPPQLETPRMMMTPPPVTPQQPKNIHIN 388
Score = 28.9 bits (63), Expect = 7.5
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 120 FLPNYLLPPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQS 179
FLP + P + ++ P PPP+ Q QQ PPQ P PP P + Q
Sbjct: 569 FLPTHTQPNLQGPLH--PPLPPPHQPQPQQPQQQPPPQHQPP-HQPPHQPPPQHQPPPQH 625
Query: 180 SPLSEP 185
P P
Sbjct: 626 PPQHPP 631
Score = 28.5 bits (62), Expect = 9.8
Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
Query: 115 PFYFRFLPNYLLPPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGS 174
PF+ P + + R P PPPP L +P Q P + PG P
Sbjct: 460 PFFLGVSGEPRFPSHLFLEQRSPPPPPPPPTL-LNSSHPVPTQ-SPLPFTQPG--PAFNQ 515
Query: 175 QGAQS-SPLSEPSRSSTRPP 193
QG Q P P R + +PP
Sbjct: 516 QGQQPVFPRERPVRPALQPP 535
>gi|178557734 microtubule-associated protein tau isoform 6 [Homo
sapiens]
Length = 776
Score = 38.1 bits (87), Expect = 0.012
Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 15/128 (11%)
Query: 136 PPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSEPSRSS-TRPPS 194
PP P P S+ +Q Q PP GP S G P G + SSP S + S +R PS
Sbjct: 493 PPAPKTPPSS-ATKQVQRRPPPAGPR--SERGEPPKSGDRSGYSSPGSPGTPGSRSRTPS 549
Query: 195 IADPDPSDLPVDRAATKAPGMEPSGSVAGLGELDPGAFLDKDAECREELLKDDSSEHGAP 254
+ P P+ P A + P PS + + L + P D LK+ S+ G+
Sbjct: 550 LPTP-PTREPKKVAVVRTPPKSPSSAKSRL-QTAPVPMPD---------LKNVKSKIGST 598
Query: 255 DSKEKTPG 262
++ + PG
Sbjct: 599 ENLKHQPG 606
>gi|188536047 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c1 [Homo sapiens]
Length = 1105
Score = 38.1 bits (87), Expect = 0.012
Identities = 39/156 (25%), Positives = 58/156 (37%), Gaps = 29/156 (18%)
Query: 90 RLQAQQRQHEINLIAYREAHNYSALPF--------YFRFLPNYLLPPYEEVVNRPPTPPP 141
R Q +Q+QH N ++AH +S P + +P+ PPY + ++ P P P
Sbjct: 955 RQQMEQQQHGQNP---QQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHP 1011
Query: 142 PYSAFQLQQQQLLPPQCGP---------------AGGSPPGIDPTRGSQGAQSSPLSEPS 186
P ++P Q P +G +PPG+ P G+ PL+ P+
Sbjct: 1012 PQPGQIPGPGSMMPGQHMPGRMIPTVAANIHPSGSGPTPPGMPPMPGNILGPRVPLTAPN 1071
Query: 187 RSSTRPPSIADPDPSDLPVDRAATKAPGMEPSGSVA 222
PP P P P P P S A
Sbjct: 1072 GMYPPPPQQQPPPP---PPADGVPPPPAPGPPASAA 1104
>gi|55956910 meningioma 1 [Homo sapiens]
Length = 1320
Score = 38.1 bits (87), Expect = 0.012
Identities = 32/96 (33%), Positives = 39/96 (40%), Gaps = 14/96 (14%)
Query: 137 PTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSEPSRSSTRPPSIA 196
P PPP + LP CGP S P GS PL EP R
Sbjct: 635 PHPPPGDLLPRRMGGSGLPADCGPHDPSLAPPPPPGGSGVLFRGPLQEPMRM-------- 686
Query: 197 DPDPSDLPVDRAATKAPGMEPSGSVAGLGEL-DPGA 231
P +P A +PG++ GS+ GLG+L PGA
Sbjct: 687 -PGEGHVP----ALPSPGLQFGGSLGGLGQLQSPGA 717
Score = 30.4 bits (67), Expect = 2.6
Identities = 34/118 (28%), Positives = 41/118 (34%), Gaps = 24/118 (20%)
Query: 127 PPYEEVVNRPPTPPPPYSAFQLQQQQLLP-----PQCGPAGGSPPGID---PTRGSQGAQ 178
PP ++ +PP PP L +Q P PQ G AG G+ P SQ AQ
Sbjct: 347 PPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSGGLQDGGPMLPSQHAQ 406
Query: 179 ------------SSPLSEPSRSSTRPPSIADPDPS----DLPVDRAATKAPGMEPSGS 220
P SEP S PP P+ D P K P + GS
Sbjct: 407 FEYPIHRLENRSMHPYSEPVFSMQHPPPQQAPNQRLQHFDAPPYMNVAKRPRFDFPGS 464
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 37.7 bits (86), Expect = 0.016
Identities = 39/133 (29%), Positives = 51/133 (38%), Gaps = 13/133 (9%)
Query: 134 NRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSEPSRSST--- 190
N PP PPP L PP+ + P GS SSP + S ++
Sbjct: 768 NWPPPPPPAPEEQDLSMADFPPPEEAFFSVASPEPAGPSGSPELVSSPAASSSSATALQI 827
Query: 191 RPPSIADPDPSDLPVDRAATKAPG-------MEPSGSVAGLG--ELDPGAFLDKDAECRE 241
+PP DP P+ P A+ APG EP G G G D GA L + +
Sbjct: 828 QPPGSPDPPPAP-PAPAPASSAPGHVAKLPQKEPVGCSKGGGPPREDVGAPLVTPSLLQM 886
Query: 242 ELLKDDSSEHGAP 254
L+ + GAP
Sbjct: 887 VRLRSVGAPGGAP 899
>gi|38176300 nestin [Homo sapiens]
Length = 1621
Score = 37.4 bits (85), Expect = 0.021
Identities = 54/205 (26%), Positives = 80/205 (39%), Gaps = 27/205 (13%)
Query: 155 PPQCGPAGGSPPGIDPT-RGSQGAQSSPLSEPSRSSTRPPSIADPDPSDLPVDRAATKAP 213
PP G G G DP S+G ++ P + D D S+ + T+AP
Sbjct: 1321 PPPQGETGKE--GWDPAVLASEGLEAPPSEKEEGEEGEEECGRDSDLSE-EFEDLGTEAP 1377
Query: 214 GM--------EPSGSVAGLGELDPGAFLDKDAECREELLKDDSSEHGAPDSKE-KTPGRH 264
+ EP G V L LDP A+ D+D E +++S E G D +E + PG
Sbjct: 1378 FLPGVPGEVAEPLGQVPQL-LLDPAAW-DRDGESDGFADEEESGEEGEEDQEEGREPGAG 1435
Query: 265 RRFTGDSGIEVCVCNRGHHDDDLKEFNTLI----DDALDGP--------LDFCDSCHVRP 312
R G S + + + L+ + + DD+L G L+ P
Sbjct: 1436 RWGPGSSVGSLQALSSSQRGEFLESDSVSVSVPWDDSLRGAVAGAPKTALETESQDSAEP 1495
Query: 313 PGDEEEGLCQSSEEQAREPGHPHLP 337
G EEE S E + + PG +P
Sbjct: 1496 SGSEEESDPVSLEREDKVPGPLEIP 1520
>gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 1 [Homo sapiens]
Length = 559
Score = 37.4 bits (85), Expect = 0.021
Identities = 54/217 (24%), Positives = 72/217 (33%), Gaps = 35/217 (16%)
Query: 136 PPTPPPPYSAFQLQQQQLLPPQ---------CGPAGGSPPGIDPTRGSQGAQSSPLSEPS 186
PP PPPP A + P+ S PG P S + S
Sbjct: 273 PPPPPPPPRASSKRPATADSPKPSAKKQKKSSSKGSRSAPGTSPRTSSSSSFSDKKPAKD 332
Query: 187 RSSTRPPSI-ADPDPSDLPVDRAATKAPGMEPSGSVAGLGELDPGAFLDKDAECREELLK 245
+SSTR + A+ +P R A KA +E S S D +F + A+
Sbjct: 333 KSSTRGEKVKAESEP------REAKKALEVEESNSE------DEASFKSESAQSSPS--N 378
Query: 246 DDSSEHGAPDSKEKTPGRHRRFTGDSGIEVCVCNRGHHDDDL--KEFNTLIDDALDGPLD 303
SS + DS + H + S +E DD +E + D L
Sbjct: 379 SSSSSDSSSDSDFEPSQNHSQGPLRSMVEDLQSEESDEDDSSSGEEAAGKTNPGRDSRLS 438
Query: 304 FCDSCHVRPPGDEEEGLCQSSEEQAREPGHPHLPRPP 340
F DS E S +REP P P PP
Sbjct: 439 FSDS---------ESDNSADSSLPSREPPPPQKPPPP 466
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 37.4 bits (85), Expect = 0.021
Identities = 37/114 (32%), Positives = 46/114 (40%), Gaps = 13/114 (11%)
Query: 125 LLPPYEEVVNRPP-----TPPPPYSAFQLQQQQLLPPQCGPAGGSP--PGIDPTRGSQGA 177
L PP+EE PP T PPP A +L P P SP P + +R
Sbjct: 545 LSPPFEESPLSPPPEELPTSPPP-EASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPF 603
Query: 178 QSSPLSEPSRSSTRPP----SIADPDPSDLPVDRAATKAPGMEPSGSVAGLGEL 227
+ SPLS P S P S P P D P+ ++P M P V+ L L
Sbjct: 604 EESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPPEESP-MSPPPEVSRLSPL 656
Score = 34.7 bits (78), Expect = 0.14
Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 19/112 (16%)
Query: 125 LLPPYEEVVNRPP------TPPPPYSAFQL--QQQQLLPPQCGPAGGSPPGIDP------ 170
L PP+EE PP +PPP S + + PP PP +
Sbjct: 599 LFPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPV 658
Query: 171 -TRGSQGAQSSPLSE-PSRSSTRPP---SIADPDPSDLPVDRAATKAPGMEP 217
+R S + SPLS P S T PP S P P D P +P P
Sbjct: 659 VSRLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPP 710
Score = 34.3 bits (77), Expect = 0.18
Identities = 63/243 (25%), Positives = 91/243 (37%), Gaps = 40/243 (16%)
Query: 136 PPTPPPPYSAFQLQQQQLLPPQCGPA---GGSPPGIDPTRGSQGAQSSPLSEPSRSSTRP 192
PP+P P + LPPQC P P P++ S A PLS PS S
Sbjct: 1002 PPSPGSPVGPASPILMEPLPPQCSPLLQHSLVPQNSPPSQCSPPA--LPLSVPSPLSPIG 1059
Query: 193 PSIADPDPSDL----PVDRAATKAPGMEPSGS---VAGLGEL-----DPGAFLDKDAECR 240
+ D ++L + + P +EPS + + +G+L P LD +
Sbjct: 1060 KVVGVSDEAELHEMETEKVSEPECPALEPSATSPLPSPMGDLSCPAPSPAPALDDFSGLG 1119
Query: 241 EELLKDDSSEHGAPDSKEKTPGRHRRFTGDSGIEVCVCNRGHHDDDLKEFNTLIDDALDG 300
E+ D + AP S+ + PG+ G +LK L+D
Sbjct: 1120 EDTAPLDGID--APGSQPE-PGQ---------------TPGSLASELKGSPVLLDPEELA 1161
Query: 301 PLDFCDSCHVRPPGDEEEGLCQSSEEQAREPGHPHLPRPPACLLLNTINEQDSPNSQSSS 360
P+ V P + G EEQ EP P P PP + + +NE S SQ +
Sbjct: 1162 PV---TPMEVYPECKQTAGQGSPCEEQ-EEPRAPVAPTPPTLIKSDIVNE-ISNLSQGDA 1216
Query: 361 SPS 363
S S
Sbjct: 1217 SAS 1219
Score = 32.0 bits (71), Expect = 0.89
Identities = 29/101 (28%), Positives = 35/101 (34%), Gaps = 14/101 (13%)
Query: 120 FLPNYLLPPYEEVVNRP-PTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQ 178
F P PY + P P PPPP S L + L SP SQ +
Sbjct: 2369 FRPGSYTDPYAQPPLTPRPQPPPPESCCALPPRSLPSDPFSRVPASPQ-------SQSSS 2421
Query: 179 SSPL------SEPSRSSTRPPSIADPDPSDLPVDRAATKAP 213
SPL +E S P PDP P R ++ P
Sbjct: 2422 QSPLTPRPLSAEAFCPSPVTPRFQSPDPYSRPPSRPQSRDP 2462
Score = 31.2 bits (69), Expect = 1.5
Identities = 28/98 (28%), Positives = 38/98 (38%), Gaps = 9/98 (9%)
Query: 127 PPYEEVVNRPP-----TPPPPYSAF--QLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQS 179
PP E ++ PP +PPP S ++ L PP PP + +R S +
Sbjct: 575 PPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPP--EASRLSPPPED 632
Query: 180 SPLSEPSRSSTRPPSIADPDPSDLPVDRAATKAPGMEP 217
SP+S P S P S LPV + P P
Sbjct: 633 SPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESP 670
Score = 30.0 bits (66), Expect = 3.4
Identities = 28/80 (35%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Query: 127 PPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSEPS 186
PP EE PP S + + PP+ P PP PT S ++S LS P
Sbjct: 637 PPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPL-SPPPEESPT--SPPPEASRLSPPP 693
Query: 187 RSS-TRPP---SIADPDPSD 202
S T PP S A P P D
Sbjct: 694 EDSPTSPPPEDSPASPPPED 713
Score = 29.3 bits (64), Expect = 5.8
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 154 LPPQCGPAGGSPPGIDPTRGSQGAQSSP--LSEPSRSSTRPPSIADPDPSDLPVD---RA 208
+PPQ G G PP PT G+ ++P LS + +PP+ + P P D P + +
Sbjct: 2106 IPPQPGALGSPPPAAAPTI-FIGSPTTPAGLSTSADGFLKPPAGSVPGP-DSPGELFLKL 2163
Query: 209 ATKAPGMEPSGSVAGLGELDP 229
+ P PS GL P
Sbjct: 2164 PPQVPAQVPSQDPFGLAPAYP 2184
Score = 28.9 bits (63), Expect = 7.5
Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Query: 125 LLPPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSE 184
L PP EE+ P P + + L++ L PP PP P + SPLS
Sbjct: 467 LSPPPEELP-ASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSP---FSPLEESPLSP 522
Query: 185 PSRSSTRPPSIADPDPSDLPVDRAATKAP 213
P S PPS A P P + + P
Sbjct: 523 PEES---PPSPALETPLSPPPEASPLSPP 548
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 37.4 bits (85), Expect = 0.021
Identities = 35/107 (32%), Positives = 39/107 (36%), Gaps = 13/107 (12%)
Query: 126 LPPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSEP 185
LPP P PP + +LLPP GP G PPG P P P
Sbjct: 430 LPPGPPPGAPPFLRPPGMPGLRGPLPRLLPP--GPPPGRPPGPPPGP----PPGLPPGPP 483
Query: 186 SRSSTRPPSIADPDPSDLPVDRAATKAPGMEPSGSVAGLGELDPGAF 232
R PP + P P +P R PGM V LG PG F
Sbjct: 484 PRGP--PPRLPPPAPPGIPPPR-----PGMMRPPLVPPLGPAPPGLF 523
Score = 32.7 bits (73), Expect = 0.52
Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 17/94 (18%)
Query: 127 PPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSEPS 186
PP PP PPP + + PP P G +PPG+ P +PL P
Sbjct: 487 PPPRLPPPAPPGIPPP------RPGMMRPPLVPPLGPAPPGLFP--------PAPLPNPG 532
Query: 187 RSSTRPPSIADP---DPSDLPVDRAATKAPGMEP 217
S P I P D S +++ AT +P
Sbjct: 533 VLSAPPNLIQRPKADDTSAATIEKKATATISAKP 566
>gi|17864090 autism susceptibility candidate 2 isoform 1 [Homo
sapiens]
Length = 1259
Score = 37.0 bits (84), Expect = 0.028
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 14/133 (10%)
Query: 90 RLQAQQRQHEINLIAYREAHNYSALPFYFRFLPNYLLP-PYEEVVNRPPTPPPPYSAFQL 148
R + Q QH+ + ++ H ++ PF P ++P P + ++ PT P+ L
Sbjct: 521 RTEFHQHQHQ-HQHTHQHTHQHTFTPFPHAIPPTAIMPTPAPPMFDKYPTKVDPFYRHSL 579
Query: 149 QQQQLLPPQCGPAGGSPPGIDPTR--GS-QGA----QSSPLSEPSRSSTRPPSIADPDPS 201
PP G PP I PT GS QGA S+P+ +R T P ++ DP
Sbjct: 580 FHSY--PPA---VSGIPPMIPPTGPFGSLQGAFQPKTSNPIDVAARPGTVPHTLLQKDPR 634
Query: 202 DLPVDRAATKAPG 214
R + PG
Sbjct: 635 LTDPFRPMLRKPG 647
>gi|14249622 ajuba isoform 1 [Homo sapiens]
Length = 538
Score = 37.0 bits (84), Expect = 0.028
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 168 IDPTRGSQGAQSSPLSEPSRSSTRPPSIADPDPSDLPVD-RAATKAPGMEPSGSVAGLGE 226
+D R +G+ +P E S + PP+ A P P LP D R AP + P S A
Sbjct: 70 LDAERNQRGSFEAPRYEGSFPAGPPPTRALPLPQSLPPDFRLEPTAPALSPRSSFASSSA 129
Query: 227 LDPGAFLDKDAECREELLKDDSSEHGAPDSK 257
D K + R LL D + GA S+
Sbjct: 130 SD----ASKPSSPRGSLLLDGAGAGGAGGSR 156
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 36.6 bits (83), Expect = 0.036
Identities = 28/94 (29%), Positives = 34/94 (36%), Gaps = 6/94 (6%)
Query: 126 LPPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCG----PAGGSPPGIDPTRGSQGAQSSP 181
LPP + PP PP P L +PP P PP P S G P
Sbjct: 645 LPPPPASI--PPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPP 702
Query: 182 LSEPSRSSTRPPSIADPDPSDLPVDRAATKAPGM 215
P +S PP+ P P+ P A PG+
Sbjct: 703 PPPPLPNSPAPPNPGGPPPAPPPPGLAPPPPPGL 736
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 36.6 bits (83), Expect = 0.036
Identities = 30/105 (28%), Positives = 40/105 (38%), Gaps = 12/105 (11%)
Query: 127 PPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSEPS 186
PP PP PPPP+++ PP G+PP + P S PS
Sbjct: 279 PPPPSRGGPPPPPPPPHNSGP-------PPPPARGRGAPPPPPSRAPTAAPPPPPPSRPS 331
Query: 187 RSSTRPP--SIADPDPSDLPVDRAATKAPGMEPSGSVAGLGELDP 229
+ PP + P P LP + P P SV G+G + P
Sbjct: 332 VAVPPPPPNRMYPPPPPALPSSAPSGPPP---PPPSVLGVGPVAP 373
Score = 29.3 bits (64), Expect = 5.8
Identities = 27/99 (27%), Positives = 31/99 (31%), Gaps = 8/99 (8%)
Query: 127 PPYEEVVNRPPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPLSEPS 186
PP R PPPP A PP P+ PP + P S PS
Sbjct: 299 PPPPPARGRGAPPPPPSRAPTAAPPP--PPPSRPSVAVPPPPPNRMYPPPPPALPSSAPS 356
Query: 187 RSSTRPPS------IADPDPSDLPVDRAATKAPGMEPSG 219
PPS +A P P P PG+ G
Sbjct: 357 GPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPGLPSDG 395
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 36.6 bits (83), Expect = 0.036
Identities = 34/143 (23%), Positives = 51/143 (35%), Gaps = 28/143 (19%)
Query: 136 PPTPPPPYSAFQLQQQQLLPPQCGPAGGSPPGIDPTRGSQGAQSSPL-SEPSRSSTRPPS 194
PP PPPP P+G +PP I PT + P EP P
Sbjct: 796 PPLPPPP-----------------PSGATPPPIAPTGPPTASPPVPAKEEPEELPAAPGP 838
Query: 195 IADPDPSDLPVDRAAT-KAPGMEPSGSVAGLGE---------LDPGAFLDKDAECREELL 244
+ P P PV T P + P G+ G G ++ + +++ E EE
Sbjct: 839 LPPPPPPPPPVPGPVTLPPPQLVPEGTPGGGGPPALEEDLTVININSSDEEEEEEEEEEE 898
Query: 245 KDDSSEHGAPDSKEKTPGRHRRF 267
+++ E D +E+ F
Sbjct: 899 EEEEEEEEEEDFEEEEEDEEEYF 921
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,443,159
Number of Sequences: 37866
Number of extensions: 1271896
Number of successful extensions: 10235
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 665
Number of HSP's that attempted gapping in prelim test: 7990
Number of HSP's gapped (non-prelim): 2482
length of query: 363
length of database: 18,247,518
effective HSP length: 104
effective length of query: 259
effective length of database: 14,309,454
effective search space: 3706148586
effective search space used: 3706148586
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.