Guide to the Human Genome
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Name: SMR3A Sequence: fasta or formatted (134aa) NCBI GI: 59806357
Description:

submaxillary gland androgen regulated protein 3 homolog A precursor

Referenced in:

Lacrimal and Salivary Glands

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5          6           2
 C cysteine            1.5          2           1
 D aspartate           0.7          1           1
 E glutamate           0.7          1           1
 F phenylalanine       5.2          7           2
 G glycine            11.9         16           1
 H histidine           1.5          2           1
 I isoleucine          2.2          3           1
 K lysine              0.7          1           1
 L leucine             6.0          8           1
 M methionine          0.7          1           1
 N asparagine          0.7          1           1
 P proline            38.1         51           5
 Q glutamine           3.0          4           1
 R arginine            4.5          6           1
 S serine              6.0          8           1
 T threonine           3.7          5           1
 V valine              1.5          2           1
 W tryptophan          1.5          2           1
 Y tyrosine            5.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   submaxillary gland androgen regulated protein 3 homo... 
SMR3B                 0.440   submaxillary gland androgen regulated protein 3 homol...
PROL1                 0.227   proline rich, lacrimal 1 
CPSF6                 0.189   cleavage and polyadenylation specific factor 6, 68 ...
WASF2                 0.186   WAS protein family, member 2 
WASL                  0.175   Wiskott-Aldrich syndrome gene-like protein 
DIAPH1                0.172   diaphanous 1 isoform 2 
DIAPH1                0.172   diaphanous 1 isoform 1 
WBP11                 0.162   WW domain binding protein 11 
TCERG1                0.151   transcription elongation regulator 1 isoform 2 [Homo...
TCERG1                0.151   transcription elongation regulator 1 isoform 1 [Homo...
CCNK                  0.151   cyclin K isoform 1 
WAS                   0.148   Wiskott-Aldrich syndrome protein 
FMN2                  0.144   formin 2 
FMN1                  0.144   formin 1 
RAPH1                 0.141   Ras association and pleckstrin homology domains 1 is...
PRR13                 0.141   proline rich 13 isoform 1 
PRR12                 0.137   proline rich 12 
FMNL2                 0.137   formin-like 2 
SF3B4                 0.137   splicing factor 3b, subunit 4 
SFRS15                0.134   splicing factor, arginine/serine-rich 15 isoform 3 ...
SFRS15                0.134   splicing factor, arginine/serine-rich 15 isoform 2 ...
SFRS15                0.134   splicing factor, arginine/serine-rich 15 isoform 1 [...
PRB1                  0.134   proline-rich protein BstNI subfamily 1 isoform 1 pre...
PRB2                  0.134   proline-rich protein BstNI subfamily 2 
ESX1                  0.134   extraembryonic, spermatogenesis, homeobox 1-like [Ho...
FMNL1                 0.134   formin-like 1 
DAZAP1                0.134   DAZ associated protein 1 isoform a 
DAZAP1                0.134   DAZ associated protein 1 isoform b 
PRB1                  0.134   proline-rich protein BstNI subfamily 1 isoform 3 pre...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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