Guide to the Human Genome
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Name: BEND4 Sequence: fasta or formatted (534aa) NCBI GI: 148762950
Description:

BEN domain containing 4 isoform a

Referenced in:

Coiled-Coil Proteins

Other entries for this name:
alt prot [441aa] BEN domain containing 4 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         39           5
 C cysteine            2.1         11           1
 D aspartate           3.9         21           1
 E glutamate           7.7         41           6
 F phenylalanine       2.8         15           1
 G glycine             6.6         35           2
 H histidine           3.2         17           2
 I isoleucine          2.6         14           1
 K lysine              3.9         21           2
 L leucine             7.5         40           2
 M methionine          1.7          9           1
 N asparagine          2.8         15           2
 P proline             9.4         50           7
 Q glutamine           6.7         36           2
 R arginine            5.2         28           2
 S serine             12.9         69           5
 T threonine           4.7         25           2
 V valine              5.2         28           2
 W tryptophan          0.7          4           2
 Y tyrosine            3.0         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BEN domain containing 4 isoform a 
BEND4                 0.813   BEN domain containing 4 isoform b 
NACC2                 0.023   BTB (POZ) domain containing 14A 
SAMD1                 0.023   sterile alpha motif domain containing 1 
KIAA1522              0.023   hypothetical protein LOC57648 
SFPQ                  0.023   splicing factor proline/glutamine rich (polypyrimidin...
TAF4                  0.022   TBP-associated factor 4 
WASL                  0.022   Wiskott-Aldrich syndrome gene-like protein 
UBN1                  0.021   ubinuclein 1 
UBN1                  0.021   ubinuclein 1 
PCLO                  0.021   piccolo isoform 2 
PCLO                  0.021   piccolo isoform 1 
KIAA0754              0.021   hypothetical protein LOC643314 
CASKIN1               0.020   CASK interacting protein 1 
TAF6                  0.020   TBP-associated factor 6 isoform gamma 
TAF6                  0.020   TBP-associated factor 6 isoform delta 
TAF6                  0.020   TBP-associated factor 6 isoform alpha 
TAF6                  0.020   TBP-associated factor 6 isoform alpha 
FOXC1                 0.020   forkhead box C1 
MBD6                  0.020   methyl-CpG binding domain protein 6 
MAZ                   0.019   MYC-associated zinc finger protein isoform 2 
MAZ                   0.019   MYC-associated zinc finger protein isoform 1 
FLJ22184              0.019   PREDICTED: hypothetical protein FLJ22184 
EIF3F                 0.019   eukaryotic translation initiation factor 3, subunit 5...
WIPF1                 0.019   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.019   WAS/WASL interacting protein family, member 1 
GRIN2D                0.019   N-methyl-D-aspartate receptor subunit 2D precursor ...
CIC                   0.019   capicua homolog 
WASF3                 0.019   WAS protein family, member 3 
PACS1                 0.019   phosphofurin acidic cluster sorting protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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