Guide to the Human Genome
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Name: WBP1 Sequence: fasta or formatted (269aa) NCBI GI: 23503229
Description:

WW domain binding protein 1

Referenced in:

WW Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         20           1
 C cysteine            6.3         17           3
 D aspartate           2.2          6           1
 E glutamate           7.4         20           2
 F phenylalanine       3.0          8           1
 G glycine             8.9         24           1
 H histidine           3.0          8           1
 I isoleucine          1.9          5           1
 K lysine              1.1          3           1
 L leucine             8.9         24           2
 M methionine          0.7          2           1
 N asparagine          1.9          5           2
 P proline            11.5         31           4
 Q glutamine           4.8         13           4
 R arginine            5.9         16           2
 S serine             10.0         27           5
 T threonine           5.2         14           1
 V valine              4.5         12           2
 W tryptophan          1.9          5           2
 Y tyrosine            3.3          9           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WW domain binding protein 1 
C10orf26              0.267   hypothetical protein LOC54838 isoform 1 
C10orf26              0.263   hypothetical protein LOC54838 isoform 2 
PRR7                  0.030   proline rich 7 (synaptic) 
CRTC1                 0.027   mucoepidermoid carcinoma translocated 1 isoform 3 [...
CRTC1                 0.027   mucoepidermoid carcinoma translocated 1 isoform 1 [...
ANXA11                0.025   annexin A11 
ANXA11                0.025   annexin A11 
ANXA11                0.025   annexin A11 
TAF4                  0.023   TBP-associated factor 4 
C15orf42              0.022   leucine-rich repeat kinase 1 
MAPT                  0.022   microtubule-associated protein tau isoform 6 
LOC729086             0.020   PREDICTED: similar to EGFR-coamplified and overexpr...
LOC729086             0.020   PREDICTED: similar to EGFR-coamplified and overexpr...
RADIL                 0.020   Rap GTPase interactor 
KIAA1522              0.018   hypothetical protein LOC57648 
ECOP                  0.018   EGFR-coamplified and overexpressed protein 
RGS3                  0.018   regulator of G-protein signalling 3 isoform 6 [Homo...
RGS3                  0.018   regulator of G-protein signalling 3 isoform 2 
RGS3                  0.018   regulator of G-protein signalling 3 isoform 1 
RANBP9                0.018   RAN binding protein 9 
SETD5                 0.018   SET domain containing 5 
SEMA6C                0.018   semaphorin Y 
ZMIZ2                 0.018   zinc finger, MIZ-type containing 2 isoform 1 
ZMIZ2                 0.018   zinc finger, MIZ-type containing 2 isoform 2 
HNRNPUL1              0.016   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
HNRNPUL1              0.016   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
SREBF1                0.016   sterol regulatory element binding transcription fact...
SREBF1                0.016   sterol regulatory element binding transcription fact...
COL27A1               0.016   collagen, type XXVII, alpha 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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