CAST 454

Name: CAST	Sequence: fasta or formatted (769aa)		NCBI GI: 109637763
Description: calpastatin isoform h		Referenced in: Protease Inhibitors
Other entries for this name: alt prot [791aa] calpastatin isoform a alt prot [756aa] calpastatin isoform e alt prot [750aa] calpastatin isoform f alt prot [772aa] calpastatin isoform g alt prot [708aa] calpastatin isoform i alt prot [667aa] calpastatin isoform j alt prot [673aa] calpastatin isoform k alt prot [654aa] calpastatin isoform l alt prot [686aa] calpastatin isoform b alt prot [430aa] calpastatin isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.5 73 4 C cysteine 0.9 7 1 D aspartate 8.8 68 2 E glutamate 11.4 88 3 F phenylalanine 0.7 5 1 G glycine 5.5 42 2 H histidine 0.9 7 1 I isoleucine 2.2 17 1 K lysine 13.5 104 3 L leucine 5.9 45 2 M methionine 1.3 10 1 N asparagine 1.2 9 1 P proline 9.4 72 2 Q glutamine 3.1 24 2 R arginine 3.1 24 2 S serine 11.6 89 3 T threonine 6.8 52 2 V valine 3.4 26 2 W tryptophan 0.0 0 0 Y tyrosine 0.9 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calpastatin isoform h CAST 0.992 calpastatin isoform a CAST 0.977 calpastatin isoform e CAST 0.967 calpastatin isoform f CAST 0.960 calpastatin isoform g CAST 0.895 calpastatin isoform b CAST 0.887 calpastatin isoform i CAST 0.871 calpastatin isoform k CAST 0.862 calpastatin isoform j CAST 0.838 calpastatin isoform l CAST 0.507 calpastatin isoform c NEFH 0.044 neurofilament, heavy polypeptide 200kDa AKAP12 0.032 A kinase (PRKA) anchor protein 12 isoform 1 AKAP12 0.032 A kinase (PRKA) anchor protein 12 isoform 2 PCLO 0.032 piccolo isoform 2 PCLO 0.032 piccolo isoform 1 AFF4 0.032 ALL1 fused gene from 5q31 NEFM 0.028 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.028 neurofilament, medium polypeptide 150kDa isoform 2 ... TRDN 0.028 triadin DSPP 0.027 dentin sialophosphoprotein preproprotein PRG4 0.026 proteoglycan 4 isoform D PRG4 0.026 proteoglycan 4 isoform C PRG4 0.026 proteoglycan 4 isoform B PRG4 0.026 proteoglycan 4 isoform A NOLC1 0.026 nucleolar and coiled-body phosphoprotein 1 BDP1 0.026 transcription factor-like nuclear regulator TCOF1 0.026 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.026 Treacher Collins-Franceschetti syndrome 1 isoform a ... AFF1 0.025 myeloid/lymphoid or mixed-lineage leukemia trithorax ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.