Guide to the Human Genome
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Name: HNRNPA3 Sequence: fasta or formatted (378aa) NCBI GI: 34740329
Description:

heterogeneous nuclear ribonucleoprotein A3

Referenced in:

hnRNP

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.1          8           2
 C cysteine            1.1          4           1
 D aspartate           5.3         20           2
 E glutamate           5.8         22           2
 F phenylalanine       5.0         19           1
 G glycine            27.2        103           6
 H histidine           1.9          7           1
 I isoleucine          1.9          7           1
 K lysine              5.6         21           2
 L leucine             2.1          8           1
 M methionine          1.9          7           1
 N asparagine          4.5         17           1
 P proline             4.0         15           3
 Q glutamine           3.2         12           3
 R arginine            7.7         29           6
 S serine              6.6         25           2
 T threonine           3.2         12           2
 V valine              5.0         19           2
 W tryptophan          0.3          1           1
 Y tyrosine            5.8         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heterogeneous nuclear ribonucleoprotein A3 
HNRNPA1               0.666   heterogeneous nuclear ribonucleoprotein A1 isoform b...
HNRNPA2B1             0.585   heterogeneous nuclear ribonucleoprotein A2/B1 isofor...
HNRNPA2B1             0.585   heterogeneous nuclear ribonucleoprotein A2/B1 isoform...
HNRNPA1               0.549   heterogeneous nuclear ribonucleoprotein A1 isoform a ...
HNRNPA1L2             0.532   heterogeneous nuclear ribonucleoprotein A1-like [Hom...
HNRNPA1L2             0.532   heterogeneous nuclear ribonucleoprotein A1-like [Hom...
LOC120364             0.470   PREDICTED: similar to heterogeneous nuclear ribonucl...
LOC120364             0.470   PREDICTED: similar to heterogeneous nuclear ribonucl...
LOC120364             0.468   PREDICTED: similar to heterogeneous nuclear ribonuc...
HNRNPA0               0.377   heterogeneous nuclear ribonucleoprotein A0 
HNRNPAB               0.231   heterogeneous nuclear ribonucleoprotein A/B isoform ...
HNRNPD                0.222   heterogeneous nuclear ribonucleoprotein D isoform a ...
HNRNPD                0.221   heterogeneous nuclear ribonucleoprotein D isoform b ...
HNRPDL                0.220   heterogeneous nuclear ribonucleoprotein D-like [Homo...
HNRNPAB               0.201   heterogeneous nuclear ribonucleoprotein A/B isoform ...
HNRNPD                0.199   heterogeneous nuclear ribonucleoprotein D isoform c ...
HNRNPD                0.199   heterogeneous nuclear ribonucleoprotein D isoform d ...
MSI2                  0.180   musashi 2 isoform a 
MSI1                  0.176   musashi 1 
MSI2                  0.171   musashi 2 isoform b 
TAF15                 0.155   TBP-associated factor 15 isoform 2 
TAF15                 0.155   TBP-associated factor 15 isoform 1 
DAZAP1                0.147   DAZ associated protein 1 isoform a 
DAZAP1                0.147   DAZ associated protein 1 isoform b 
KRT9                  0.145   keratin 9 
LOC100294395          0.143   PREDICTED: similar to serum response factor-related...
LOR                   0.118   loricrin 
FAM98B                0.117   family with sequence similarity 98, member B isofor...
KRT10                 0.117   keratin 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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