Guide to the Human Genome
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Name: ILF3 Sequence: fasta or formatted (898aa) NCBI GI: 212549553
Description:

interleukin enhancer binding factor 3 isoform d

Referenced in:

Interleukins and Their Receptors
RNA Editing and Other RNA Modifications
Translation Factors
Zinc Finger Proteins

Other entries for this name:
alt prot [706aa] interleukin enhancer binding factor 3 isoform e
alt prot [894aa] interleukin enhancer binding factor 3 isoform a
alt prot [702aa] interleukin enhancer binding factor 3 isoform b
alt prot [690aa] interleukin enhancer binding factor 3 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         71           2
 C cysteine            0.8          7           1
 D aspartate           4.3         39           2
 E glutamate           6.0         54           2
 F phenylalanine       1.6         14           1
 G glycine            13.3        119           9
 H histidine           2.6         23           1
 I isoleucine          2.3         21           1
 K lysine              7.3         66           5
 L leucine             6.7         60           3
 M methionine          2.7         24           1
 N asparagine          4.7         42           1
 P proline             7.2         65           4
 Q glutamine           5.1         46           3
 R arginine            4.3         39           2
 S serine              8.9         80           2
 T threonine           3.6         32           2
 V valine              5.7         51           2
 W tryptophan          0.4          4           1
 Y tyrosine            4.6         41           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin enhancer binding factor 3 isoform d [Ho... 
ILF3                  0.993   interleukin enhancer binding factor 3 isoform a [Hom...
ILF3                  0.753   interleukin enhancer binding factor 3 isoform e [Ho...
ILF3                  0.745   interleukin enhancer binding factor 3 isoform b [Hom...
ILF3                  0.743   interleukin enhancer binding factor 3 isoform c [Hom...
STRBP                 0.387   spermatid perinuclear RNA binding protein 
ZFR                   0.188   zinc finger RNA binding protein 
ZFR2                  0.175   zinc finger RNA binding protein 2 isoform 1 
ADARB1                0.080   RNA-specific adenosine deaminase B1 isoform 7 [Homo...
ADARB1                0.080   RNA-specific adenosine deaminase B1 isoform 3 
ADARB1                0.080   RNA-specific adenosine deaminase B1 isoform 2 
ADARB1                0.080   RNA-specific adenosine deaminase B1 isoform 1 
ADARB2                0.057   adenosine deaminase, RNA-specific, B2 
ILF2                  0.042   interleukin enhancer binding factor 2 
TAF15                 0.041   TBP-associated factor 15 isoform 2 
TAF15                 0.041   TBP-associated factor 15 isoform 1 
FUS                   0.038   fusion (involved in t(12;16) in malignant liposarcoma...
HRNR                  0.038   hornerin 
FLG2                  0.037   filaggrin family member 2 
HNRNPA1               0.036   heterogeneous nuclear ribonucleoprotein A1 isoform b...
LOR                   0.036   loricrin 
HNRNPA3               0.033   heterogeneous nuclear ribonucleoprotein A3 
FAM98A                0.032   hypothetical protein LOC25940 
KRT9                  0.032   keratin 9 
DMKN                  0.027   dermokine isoform 5 precursor 
DMKN                  0.027   dermokine isoform 3 precursor 
DMKN                  0.027   dermokine isoform 4 precursor 
DMKN                  0.027   dermokine isoform 2 precursor 
KRT10                 0.027   keratin 10 
PPP1R10               0.026   protein phosphatase 1, regulatory subunit 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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