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Search of human proteins with 14249636
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14249636 TOX high mobility group box family member 2 isoform
c [Homo sapiens]
(464 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149408144 TOX high mobility group box family member 2 isoform... 936 0.0
gi|149408141 TOX high mobility group box family member 2 isoform... 936 0.0
gi|14249636 TOX high mobility group box family member 2 isoform ... 936 0.0
gi|149408146 TOX high mobility group box family member 2 isoform... 872 0.0
gi|7662322 thymus high mobility group box protein TOX [Homo sapi... 369 e-102
gi|226246533 TOX high mobility group box family member 3 isoform... 280 2e-75
gi|226054295 TOX high mobility group box family member 3 isoform... 277 2e-74
gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens] 222 6e-58
gi|4504425 high-mobility group box 1 [Homo sapiens] 80 3e-15
gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens] 80 3e-15
gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens] 80 3e-15
gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens] 80 3e-15
gi|4507241 structure specific recognition protein 1 [Homo sapiens] 79 1e-14
gi|194688135 high-mobility group box 2 [Homo sapiens] 77 3e-14
gi|194688133 high-mobility group box 2 [Homo sapiens] 77 3e-14
gi|11321591 high-mobility group box 2 [Homo sapiens] 77 3e-14
gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens] 77 3e-14
gi|56806673 high-mobility group box 1-like 1 [Homo sapiens] 73 5e-13
gi|71143137 high-mobility group box 3 [Homo sapiens] 71 2e-12
gi|239742753 PREDICTED: similar to high mobility group box 3 iso... 70 3e-12
gi|169168462 PREDICTED: similar to high mobility group box 3 [Ho... 70 4e-12
gi|169168166 PREDICTED: similar to high mobility group box 3 [Ho... 70 4e-12
gi|113416897 PREDICTED: similar to high mobility group box 3 iso... 70 4e-12
gi|83715964 high-mobility group 20B [Homo sapiens] 68 2e-11
gi|169212060 PREDICTED: high mobility group protein B3-like prot... 66 6e-11
gi|239745831 PREDICTED: high mobility group protein B3-like prot... 66 6e-11
gi|26051278 nuclear pore membrane protein 121 [Homo sapiens] 66 6e-11
gi|169184027 PREDICTED: similar to high mobility group box 3 [Ho... 65 1e-10
gi|113421073 PREDICTED: similar to high mobility group box 3 [Ho... 65 1e-10
gi|113420668 PREDICTED: similar to high mobility group box 3 [Ho... 65 1e-10
>gi|149408144 TOX high mobility group box family member 2 isoform a
[Homo sapiens]
Length = 506
Score = 936 bits (2419), Expect = 0.0
Identities = 464/464 (100%), Positives = 464/464 (100%)
Query: 1 MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60
MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN
Sbjct: 43 MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 102
Query: 61 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 120
GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA
Sbjct: 103 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 162
Query: 121 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 180
MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK
Sbjct: 163 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 222
Query: 181 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 240
RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS
Sbjct: 223 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 282
Query: 241 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP
Sbjct: 283 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 342
Query: 301 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 360
KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL
Sbjct: 343 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 402
Query: 361 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 420
HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS
Sbjct: 403 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 462
Query: 421 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 464
SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT
Sbjct: 463 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 506
>gi|149408141 TOX high mobility group box family member 2 isoform c
[Homo sapiens]
Length = 464
Score = 936 bits (2419), Expect = 0.0
Identities = 464/464 (100%), Positives = 464/464 (100%)
Query: 1 MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60
MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN
Sbjct: 1 MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60
Query: 61 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 120
GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA
Sbjct: 61 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 120
Query: 121 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 180
MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK
Sbjct: 121 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 180
Query: 181 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 240
RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS
Sbjct: 181 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 240
Query: 241 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP
Sbjct: 241 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
Query: 301 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 360
KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL
Sbjct: 301 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 360
Query: 361 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 420
HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS
Sbjct: 361 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 420
Query: 421 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 464
SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT
Sbjct: 421 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 464
>gi|14249636 TOX high mobility group box family member 2 isoform c
[Homo sapiens]
Length = 464
Score = 936 bits (2419), Expect = 0.0
Identities = 464/464 (100%), Positives = 464/464 (100%)
Query: 1 MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60
MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN
Sbjct: 1 MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60
Query: 61 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 120
GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA
Sbjct: 61 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 120
Query: 121 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 180
MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK
Sbjct: 121 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 180
Query: 181 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 240
RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS
Sbjct: 181 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 240
Query: 241 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP
Sbjct: 241 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
Query: 301 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 360
KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL
Sbjct: 301 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 360
Query: 361 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 420
HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS
Sbjct: 361 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 420
Query: 421 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 464
SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT
Sbjct: 421 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 464
>gi|149408146 TOX high mobility group box family member 2 isoform b
[Homo sapiens]
Length = 488
Score = 872 bits (2253), Expect = 0.0
Identities = 437/464 (94%), Positives = 437/464 (94%), Gaps = 27/464 (5%)
Query: 1 MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60
MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN
Sbjct: 52 MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 111
Query: 61 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 120
GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA
Sbjct: 112 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPGPLLGRPA 171
Query: 121 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 180
MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK
Sbjct: 172 MLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPSPSSSTQEEESEVHFKISGEK 231
Query: 181 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 240
RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS
Sbjct: 232 RPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVAS 291
Query: 241 MWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
MWDSLGEEQKQ SSPDQGETKSTQANPPAKMLPP
Sbjct: 292 MWDSLGEEQKQ---------------------------SSPDQGETKSTQANPPAKMLPP 324
Query: 301 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 360
KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL
Sbjct: 325 KQPMYAMPGLASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTL 384
Query: 361 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 420
HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS
Sbjct: 385 HQQLSLPPHAQGALLSPPVSMSPAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPS 444
Query: 421 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 464
SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT
Sbjct: 445 SSGSCSPGPSNPTSSGDWDSSYPSGECGISTCSLLPRDKSLYLT 488
>gi|7662322 thymus high mobility group box protein TOX [Homo
sapiens]
Length = 526
Score = 369 bits (948), Expect = e-102
Identities = 228/501 (45%), Positives = 300/501 (59%), Gaps = 55/501 (10%)
Query: 1 MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60
M++ + + + SQ+Y G S +ED+ IPPITPP+LP+ SL+HL + E+ YHSLCH + N
Sbjct: 44 MTEPSQDYVPASQSYPGPSLESEDFNIPPITPPSLPDHSLVHLNEVESGYHSLCHPMNHN 103
Query: 61 GLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDS----------G 110
GLLP + Q MDLP I VSNML QD LLS + + ++ + E Y S G
Sbjct: 104 GLLPFHP-QNMDLPEITVSNMLGQDGTLLSNSISVMPDIRNPEGTQYSSHPQMAAMRPRG 162
Query: 111 RPGPLLGRPAMLA-SHMSALSQSQLISQMGIR---SSIAHSSPSPPGSKSATPSPSSSTQ 166
+P + +P M+ ++ ++QSQL +Q+G+ S++ H+SPSPPGSKSATPSPSSS
Sbjct: 163 QPADIRQQPGMMPHGQLTTINQSQLSAQLGLNMGGSNVPHNSPSPPGSKSATPSPSSSVH 222
Query: 167 EEESEVHFKISG-EKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQ 225
E+E + KI+G EKRP++D GKK K PKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQ
Sbjct: 223 EDEGDDTSKINGGEKRPASDMGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQ 282
Query: 226 NPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGE 285
NP+ATFG+VSKIVASMWD LGEEQKQ YK+KTEAAKKEYLK LAAYRASLVSKS + +
Sbjct: 283 NPNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLVSKSYSEPVD 342
Query: 286 TKSTQANPPAKMLPPKQPMYAMPGLA-SFLTPSDLQAFRSGASP------ASLARTLGSK 338
K++Q P +++ K ++ P A S L S + G +P SL R + K
Sbjct: 343 VKTSQ---PPQLINSKPSVFHGPSQAHSALYLSSHYHQQPGMNPHLTAMHPSLPRNIAPK 399
Query: 339 S--------LLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSP-----PVSMSPAP 385
+ ++ SPPPP +SP LHQ L++ H + P P+ + A
Sbjct: 400 PNNQMPVTVSIANMAVSPPPP--LQISPPLHQHLNMQQHQPLTMQQPLGNQLPMQVQSAL 457
Query: 386 QPPVLPTPMALQ--VQLAMSPSPPGPQDFPHISEFPSSSGSCSPGPSNPTSSGDWDSSYP 443
P + LQ Q ++P+ Q E+ S C P P DW++ Y
Sbjct: 458 HSPTMQQGFTLQPDYQTIINPTSTAAQVVTQAMEYVRS--GCRNPPPQPV---DWNNDYC 512
Query: 444 SGECGISTCSLLPRDKSLYLT 464
S + RDK+LYLT
Sbjct: 513 SS-------GGMQRDKALYLT 526
>gi|226246533 TOX high mobility group box family member 3 isoform 2
[Homo sapiens]
Length = 571
Score = 280 bits (717), Expect = 2e-75
Identities = 188/428 (43%), Positives = 250/428 (58%), Gaps = 48/428 (11%)
Query: 1 MSDGNPELLSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTPN 60
M++ N + S+T++ S +E++EIPPITPP +P+L + D + +L L
Sbjct: 35 MAEANNAFFAASETFHTPSLGDEEFEIPPITPPPESDPAL-GMPDVLLPFQALSDPLPSQ 93
Query: 61 G--LLPAYSYQAMDLPAIMVS-NMLAQDSHLLSGQLPTIQEMVHSEVAAY---------- 107
G P + Q++DLP+I +S N++ QD L S L Q H++V+ Y
Sbjct: 94 GSEFTPQFPPQSLDLPSITISRNLVEQDGVLHSSGLHMDQS--HTQVSQYRQDPSLIMRS 151
Query: 108 -----DSGRPGPLLGRPAMLASHMSALSQSQLISQMGIR---SSIAHSSPSPPGSKSATP 159
D+ R G M + ++ ++QSQL +Q+G+ +S+ H+SPSPP SKSATP
Sbjct: 152 IVHMTDAARSG------VMPPAQLTTINQSQLSAQLGLNLGGASMPHTSPSPPASKSATP 205
Query: 160 SPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQ 219
SPSSS EE+++ + GEKR + D GKK K PKKKKKKDPNEPQKPVSAYALFFRDTQ
Sbjct: 206 SPSSSINEEDADEANRAIGEKRAAPDSGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQ 265
Query: 220 AAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKS 279
AAIKGQNP+ATFG+VSKIVASMWDSLGEEQKQ YKRKTEAAKKEYLKALAAYRASLVSK+
Sbjct: 266 AAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYRASLVSKA 325
Query: 280 SPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFL---TPSDLQAFRSGASPASLARTLG 336
+ + E A+ + Q A L S L TP Q ASP +L ++L
Sbjct: 326 AAESAE---------AQTIRSVQQTLASTNLTSSLLLNTPLS-QHGTVSASPQTLQQSL- 374
Query: 337 SKSLLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSP--PVSMSPAPQPPVLPTPM 394
+S+ P P S T+ ++P + L+S + AP V P+
Sbjct: 375 PRSIAPKPLTMRLPMNQIVTSVTI--AANMPSNIGAPLISSMGTTMVGSAPSTQVSPSVQ 432
Query: 395 ALQVQLAM 402
Q Q+ +
Sbjct: 433 TQQHQMQL 440
>gi|226054295 TOX high mobility group box family member 3 isoform 1
[Homo sapiens]
Length = 576
Score = 277 bits (708), Expect = 2e-74
Identities = 189/429 (44%), Positives = 250/429 (58%), Gaps = 49/429 (11%)
Query: 1 MSDGNPELLSTS-QTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCHGLTP 59
M++ N + S QT++ S +E++EIPPITPP +P+L + D + +L L
Sbjct: 39 MAEANNAFFAASEQTFHTPSLGDEEFEIPPITPPPESDPAL-GMPDVLLPFQALSDPLPS 97
Query: 60 NG--LLPAYSYQAMDLPAIMVS-NMLAQDSHLLSGQLPTIQEMVHSEVAAY--------- 107
G P + Q++DLP+I +S N++ QD L S L Q H++V+ Y
Sbjct: 98 QGSEFTPQFPPQSLDLPSITISRNLVEQDGVLHSSGLHMDQS--HTQVSQYRQDPSLIMR 155
Query: 108 ------DSGRPGPLLGRPAMLASHMSALSQSQLISQMGIR---SSIAHSSPSPPGSKSAT 158
D+ R G M + ++ ++QSQL +Q+G+ +S+ H+SPSPP SKSAT
Sbjct: 156 SIVHMTDAARSG------VMPPAQLTTINQSQLSAQLGLNLGGASMPHTSPSPPASKSAT 209
Query: 159 PSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDT 218
PSPSSS EE+++ + GEKR + D GKK K PKKKKKKDPNEPQKPVSAYALFFRDT
Sbjct: 210 PSPSSSINEEDADEANRAIGEKRAAPDSGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDT 269
Query: 219 QAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSK 278
QAAIKGQNP+ATFG+VSKIVASMWDSLGEEQKQ YKRKTEAAKKEYLKALAAYRASLVSK
Sbjct: 270 QAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYRASLVSK 329
Query: 279 SSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFL---TPSDLQAFRSGASPASLARTL 335
++ + E A+ + Q A L S L TP Q ASP +L ++L
Sbjct: 330 AAAESAE---------AQTIRSVQQTLASTNLTSSLLLNTPLS-QHGTVSASPQTLQQSL 379
Query: 336 GSKSLLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSP--PVSMSPAPQPPVLPTP 393
+S+ P P S T+ ++P + L+S + AP V P+
Sbjct: 380 -PRSIAPKPLTMRLPMNQIVTSVTI--AANMPSNIGAPLISSMGTTMVGSAPSTQVSPSV 436
Query: 394 MALQVQLAM 402
Q Q+ +
Sbjct: 437 QTQQHQMQL 445
>gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens]
Length = 621
Score = 222 bits (565), Expect = 6e-58
Identities = 168/464 (36%), Positives = 229/464 (49%), Gaps = 50/464 (10%)
Query: 9 LSTSQTYNGQSENNEDYEIPPITPPNLPEPSLLHLGDHEASYHSLCH-GLTPNGLLPA-Y 66
LS ++T++ S +E++EIPPI+ + P L + D + L + +G A Y
Sbjct: 21 LSGAETFHTPSLGDEEFEIPPISLDSDPS---LAVSDVVGHFDDLADPSSSQDGSFSAQY 77
Query: 67 SYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEVAAYDSGRPG----PLLGRPAML 122
Q +D+P M ++ Q LLSG L ++ HS Y + P P+ + L
Sbjct: 78 GVQTLDMPVGMTHGLMEQGGGLLSGGLT--MDLDHSIGTQYSANPPVTIDVPMTDMTSGL 135
Query: 123 ASH--MSALSQSQLISQMGIR---SSIAHSSPSPPGSKSATPSPSSSTQEEESE-VHFKI 176
H ++ + QS+L SQ+G+ +I + SP S TPSP+SS E+ E ++
Sbjct: 136 MGHSQLTTIDQSELSSQLGLSLGGGTILPPAQSPEDRLSTTPSPTSSLHEDGVEDFRRQL 195
Query: 177 SGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSK 236
+K + GKK K PKK+KKKDPNEPQKPVSAYALFFRDTQAAIKGQNP+ATFG+VSK
Sbjct: 196 PSQKTVVVEAGKKQKAPKKRKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSK 255
Query: 237 IVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYR-----ASLVSKSSPDQGETKSTQA 291
IVASMWDSLGEEQKQ YKRKTEAAKKEYLKALAAY+ + V D T +
Sbjct: 256 IVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYKDNQECQATVETVELDPAPPSQTPS 315
Query: 292 NPPAKMLPPKQPMYAM---PGLA-SFLTPSDL------QAFRSGASPASLARTLGSKSLL 341
PP + P P A P L+ S + S L QA ++ + + +K +L
Sbjct: 316 PPPMATVDPASPAPASIEPPALSPSIVVNSTLSSYVANQASSGAGGQPNITKLIITKQML 375
Query: 342 PG------------LSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSPPVSMSPAPQPPV 389
P + A+ L T ++ P Q +++ V + A
Sbjct: 376 PSSITMSQGGMVTVIPATVVTSRGLQLGQT--STATIQPSQQAQIVTRSVLQAAAAAAAA 433
Query: 390 ----LPTPMALQVQLAMSPSPPGPQDFPHISEFPSSSGSCSPGP 429
LP P L P PP Q + + P P P
Sbjct: 434 ASMQLPPPRLQPPPLQQMPQPPTQQQVTILQQPPPLQAMQQPPP 477
Score = 41.6 bits (96), Expect = 0.002
Identities = 55/195 (28%), Positives = 68/195 (34%), Gaps = 62/195 (31%)
Query: 311 ASFLTPSDLQAFRSGASPASLARTLGSKSLLPGLSASPPPPPSFPLSPTLHQQ--LSLPP 368
A +T S LQA + A+ AS+ LP PPP P PT Q L PP
Sbjct: 416 AQIVTRSVLQAAAAAAAAASMQ--------LPPPRLQPPPLQQMPQPPTQQQVTILQQPP 467
Query: 369 HAQGALLSPP--VSMSPAPQPPVL-----PTPMALQVQLAMSP-----SPPGPQDFP--- 413
Q PP V ++ QPP L P P L++Q + P SP P +
Sbjct: 468 PLQAMQQPPPQKVRINLQQQPPPLQIKSVPLP-TLKMQTTLVPPTVESSPERPMNNSPEA 526
Query: 414 HISEFPSSSGSC----------------------------SPGP--------SNPTSSGD 437
H E PS C SP P + P S D
Sbjct: 527 HTVEAPSPETICEMITDVVPEVESPSQMDVELVSGSPVALSPQPRCVRSGCENPPIVSKD 586
Query: 438 WDSSYPSGECGISTC 452
WD+ Y S EC + C
Sbjct: 587 WDNEYCSNECVVKHC 601
>gi|4504425 high-mobility group box 1 [Homo sapiens]
Length = 215
Score = 80.5 bits (197), Expect = 3e-15
Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 4/106 (3%)
Query: 191 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 250
K KKK KDPN P++P SA+ LF + + IKG++P + GDV+K + MW++ + K
Sbjct: 82 KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141
Query: 251 QAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 296
Q Y++K K++Y K +AAYRA K PD + +A K
Sbjct: 142 QPYEKKAAKLKEKYEKDIAAYRA----KGKPDAAKKGVVKAEKSKK 183
Score = 49.7 bits (117), Expect = 6e-06
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSAT--FGDVSKIVASMWDSLGEEQKQAYKR 255
K DP +P+ +S+YA F + + K ++P A+ F + SK + W ++ ++K ++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFED 62
Query: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 315
+A K Y + + Y P +GETK +P A PK+P A S
Sbjct: 63 MAKADKARYEREMKTY--------IPPKGETKKKFKDPNA----PKRPPSAFFLFCSEYR 110
Query: 316 PSDLQAFRSGASPASLARTLG 336
P ++ G S +A+ LG
Sbjct: 111 PK-IKGEHPGLSIGDVAKKLG 130
>gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]
Length = 488
Score = 80.5 bits (197), Expect = 3e-15
Identities = 36/83 (43%), Positives = 55/83 (66%)
Query: 191 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 250
K KKK KDPN P++P SA+ L+F + IKG+ P +FGDV+K + MW++ + K
Sbjct: 218 KGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDK 277
Query: 251 QAYKRKTEAAKKEYLKALAAYRA 273
Q Y++++ K++Y K +AAYRA
Sbjct: 278 QPYEKRSAKLKEKYEKDIAAYRA 300
Score = 32.0 bits (71), Expect = 1.2
Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 6/133 (4%)
Query: 204 PQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKE 263
P +P ++ + A S F + SK + W ++ ++K + R ++
Sbjct: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGR-ARGKFED 198
Query: 264 YLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFR 323
KA A+ + P +GETK +P A PK+P A S P ++ R
Sbjct: 199 MAKADKAHYKREMKTYIPPKGETKKKFKDPNA----PKRPPSAFFLYFSEYGPK-IKGER 253
Query: 324 SGASPASLARTLG 336
G S +A+ LG
Sbjct: 254 PGLSFGDVAKKLG 266
>gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
Length = 487
Score = 80.5 bits (197), Expect = 3e-15
Identities = 36/83 (43%), Positives = 55/83 (66%)
Query: 191 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 250
K KKK KDPN P++P SA+ L+F + IKG+ P +FGDV+K + MW++ + K
Sbjct: 218 KGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDK 277
Query: 251 QAYKRKTEAAKKEYLKALAAYRA 273
Q Y++++ K++Y K +AAYRA
Sbjct: 278 QPYEKRSAKLKEKYEKDIAAYRA 300
Score = 32.0 bits (71), Expect = 1.2
Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 6/133 (4%)
Query: 204 PQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKE 263
P +P ++ + A S F + SK + W ++ ++K + R ++
Sbjct: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGR-ARGKFED 198
Query: 264 YLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFR 323
KA A+ + P +GETK +P A PK+P A S P ++ R
Sbjct: 199 MAKADKAHYKREMKTYIPPKGETKKKFKDPNA----PKRPPSAFFLYFSEYGPK-IKGER 253
Query: 324 SGASPASLARTLG 336
G S +A+ LG
Sbjct: 254 PGLSFGDVAKKLG 266
>gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]
Length = 486
Score = 80.5 bits (197), Expect = 3e-15
Identities = 36/83 (43%), Positives = 55/83 (66%)
Query: 191 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 250
K KKK KDPN P++P SA+ L+F + IKG+ P +FGDV+K + MW++ + K
Sbjct: 218 KGETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDK 277
Query: 251 QAYKRKTEAAKKEYLKALAAYRA 273
Q Y++++ K++Y K +AAYRA
Sbjct: 278 QPYEKRSAKLKEKYEKDIAAYRA 300
Score = 32.0 bits (71), Expect = 1.2
Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 6/133 (4%)
Query: 204 PQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKE 263
P +P ++ + A S F + SK + W ++ ++K + R ++
Sbjct: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGR-ARGKFED 198
Query: 264 YLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFR 323
KA A+ + P +GETK +P A PK+P A S P ++ R
Sbjct: 199 MAKADKAHYKREMKTYIPPKGETKKKFKDPNA----PKRPPSAFFLYFSEYGPK-IKGER 253
Query: 324 SGASPASLARTLG 336
G S +A+ LG
Sbjct: 254 PGLSFGDVAKKLG 266
>gi|4507241 structure specific recognition protein 1 [Homo sapiens]
Length = 709
Score = 78.6 bits (192), Expect = 1e-14
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 160 SPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKK-------KDPNEPQKPVSAYA 212
S SSS+ E +S+ K KR K AK+ K +KK KDPN P++P+SAY
Sbjct: 500 SASSSSNEGDSDRDEK----KRKQLKKAKMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYM 555
Query: 213 LFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYR 272
L+ ++ IK +P + D+SK +W + +E+K+ + RK E A+++Y KA+ Y
Sbjct: 556 LWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYE 615
Query: 273 ASLVSKSSPDQGETK 287
S D+ + K
Sbjct: 616 GGRGESSKRDKSKKK 630
>gi|194688135 high-mobility group box 2 [Homo sapiens]
Length = 209
Score = 77.0 bits (188), Expect = 3e-14
Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 191 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 250
K KK KKKDPN P++P SA+ LF + + IK ++P + GD +K + MW + K
Sbjct: 82 KGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDK 141
Query: 251 QAYKRKTEAAKKEYLKALAAYRA---SLVSKSSPDQGETKSTQANPP 294
Q Y++K K++Y K +AAYRA S K P + T S + N P
Sbjct: 142 QPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGR-PTGSKKKNEP 187
Score = 47.4 bits (111), Expect = 3e-05
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLGEEQKQAYKR 255
K DPN+P+ +S+YA F + + K ++P S F + SK + W ++ ++K ++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
++ K Y + + Y P +G+ K + +P A PP
Sbjct: 63 MAKSDKARYDREMKNY--------VPPKGDKKGKKKDPNAPKRPP 99
>gi|194688133 high-mobility group box 2 [Homo sapiens]
Length = 209
Score = 77.0 bits (188), Expect = 3e-14
Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 191 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 250
K KK KKKDPN P++P SA+ LF + + IK ++P + GD +K + MW + K
Sbjct: 82 KGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDK 141
Query: 251 QAYKRKTEAAKKEYLKALAAYRA---SLVSKSSPDQGETKSTQANPP 294
Q Y++K K++Y K +AAYRA S K P + T S + N P
Sbjct: 142 QPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGR-PTGSKKKNEP 187
Score = 47.4 bits (111), Expect = 3e-05
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLGEEQKQAYKR 255
K DPN+P+ +S+YA F + + K ++P S F + SK + W ++ ++K ++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
++ K Y + + Y P +G+ K + +P A PP
Sbjct: 63 MAKSDKARYDREMKNY--------VPPKGDKKGKKKDPNAPKRPP 99
>gi|11321591 high-mobility group box 2 [Homo sapiens]
Length = 209
Score = 77.0 bits (188), Expect = 3e-14
Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 191 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 250
K KK KKKDPN P++P SA+ LF + + IK ++P + GD +K + MW + K
Sbjct: 82 KGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDK 141
Query: 251 QAYKRKTEAAKKEYLKALAAYRA---SLVSKSSPDQGETKSTQANPP 294
Q Y++K K++Y K +AAYRA S K P + T S + N P
Sbjct: 142 QPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGR-PTGSKKKNEP 187
Score = 47.4 bits (111), Expect = 3e-05
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNP--SATFGDVSKIVASMWDSLGEEQKQAYKR 255
K DPN+P+ +S+YA F + + K ++P S F + SK + W ++ ++K ++
Sbjct: 3 KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
Query: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
++ K Y + + Y P +G+ K + +P A PP
Sbjct: 63 MAKSDKARYDREMKNY--------VPPKGDKKGKKKDPNAPKRPP 99
>gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
Length = 879
Score = 77.0 bits (188), Expect = 3e-14
Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 191 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 250
K KKKK KDPN P++P A+ LF + + IKG++P + DV K +A MW++ K
Sbjct: 756 KGEKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADK 815
Query: 251 QAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 296
Q Y++K K++Y K +AAYRA K P+ + + +A K
Sbjct: 816 QFYEKKAAKLKEKYKKDIAAYRA----KGKPNSAKKRVVKAEKSKK 857
>gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]
Length = 211
Score = 73.2 bits (178), Expect = 5e-13
Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
Query: 191 KNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQK 250
K KKK KDPN P++P SA+ LF + IKG++P + GDV+K + MW++ + K
Sbjct: 82 KGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141
Query: 251 QAYKRKTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAK 296
Q ++K K++Y K +AAY+A K P+ + +A K
Sbjct: 142 QPGEKKAAKLKEKYEKDIAAYQA----KGKPEAAKKGVVKAEKSKK 183
Score = 44.3 bits (103), Expect = 2e-04
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 15/141 (10%)
Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSAT--FGDVSKIVASMWDSLGEEQKQAYKR 255
K DP +P+ +S+YA F + + K ++ A+ F + S + W ++ ++K ++
Sbjct: 3 KGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFED 62
Query: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 315
+A K Y + + Y P +GETK +P A PK+P A S
Sbjct: 63 MAKADKTHYERQMKTY--------IPPKGETKKKFKDPNA----PKRPPSAFFLFCSEYH 110
Query: 316 PSDLQAFRSGASPASLARTLG 336
P ++ G S +A+ LG
Sbjct: 111 PK-IKGEHPGLSIGDVAKKLG 130
>gi|71143137 high-mobility group box 3 [Homo sapiens]
Length = 200
Score = 70.9 bits (172), Expect = 2e-12
Identities = 32/78 (41%), Positives = 49/78 (62%)
Query: 196 KKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKR 255
KKKKDPN P++P S + LF + + IK NP + GDV+K + MW++L + +KQ Y
Sbjct: 85 KKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYIT 144
Query: 256 KTEAAKKEYLKALAAYRA 273
K K++Y K +A Y++
Sbjct: 145 KAAKLKEKYEKDVADYKS 162
Score = 43.1 bits (100), Expect = 5e-04
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 12/105 (11%)
Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPS--ATFGDVSKIVASMWDSLGEEQKQAYKR 255
K DP +P+ +SAYA F + + K +NP F + SK + W ++ ++K +
Sbjct: 3 KGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDE 62
Query: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
+A K Y + + Y P +G K N P + PP
Sbjct: 63 MAKADKVRYDREMKDY--------GPAKGGKKKKDPNAPKR--PP 97
>gi|239742753 PREDICTED: similar to high mobility group box 3
isoform 2 [Homo sapiens]
Length = 183
Score = 70.5 bits (171), Expect = 3e-12
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 150 SPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKK--KKKKDPNEPQKP 207
SP SK + + + +E+S+ +K ++ K P K KKKKDP+ P++P
Sbjct: 17 SPEFSKKCSERWKTMSGKEKSKFDEMAKTDK---VHCDREMKGPAKGGKKKKDPSAPKRP 73
Query: 208 VSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKA 267
S + LF + + IK NP + GDV+K + MW++L + +KQ Y KT K++Y K
Sbjct: 74 PSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKD 133
Query: 268 LA 269
+A
Sbjct: 134 VA 135
>gi|169168462 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 204
Score = 70.1 bits (170), Expect = 4e-12
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 188 KKAKNPKK--KKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSL 245
++ K P K KKKKDP+ P++P S + LF + + IK NP + GDV+K + MW++L
Sbjct: 70 REMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNL 129
Query: 246 GEEQKQAYKRKTEAAKKEYLKALA 269
+ +KQ Y KT K++Y K +A
Sbjct: 130 NDSEKQPYITKTAKLKEKYEKDVA 153
Score = 35.4 bits (80), Expect = 0.11
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKT 257
K DP +P+ +SAY F + + K +NP F + SK + W ++ ++K +
Sbjct: 3 KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61
Query: 258 EAAK 261
+ K
Sbjct: 62 KTDK 65
>gi|169168166 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 204
Score = 70.1 bits (170), Expect = 4e-12
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 188 KKAKNPKK--KKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSL 245
++ K P K KKKKDP+ P++P S + LF + + IK NP + GDV+K + MW++L
Sbjct: 70 REMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNL 129
Query: 246 GEEQKQAYKRKTEAAKKEYLKALA 269
+ +KQ Y KT K++Y K +A
Sbjct: 130 NDSEKQPYITKTAKLKEKYEKDVA 153
Score = 35.4 bits (80), Expect = 0.11
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKT 257
K DP +P+ +SAY F + + K +NP F + SK + W ++ ++K +
Sbjct: 3 KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61
Query: 258 EAAK 261
+ K
Sbjct: 62 KTDK 65
>gi|113416897 PREDICTED: similar to high mobility group box 3
isoform 1 [Homo sapiens]
Length = 201
Score = 70.1 bits (170), Expect = 4e-12
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 188 KKAKNPKK--KKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSL 245
++ K P K KKKKDP+ P++P S + LF + + IK NP + GDV+K + MW++L
Sbjct: 70 REMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNL 129
Query: 246 GEEQKQAYKRKTEAAKKEYLKALA 269
+ +KQ Y KT K++Y K +A
Sbjct: 130 NDSEKQPYITKTAKLKEKYEKDVA 153
Score = 35.4 bits (80), Expect = 0.11
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKT 257
K DP +P+ +SAY F + + K +NP F + SK + W ++ ++K +
Sbjct: 3 KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61
Query: 258 EAAK 261
+ K
Sbjct: 62 KTDK 65
>gi|83715964 high-mobility group 20B [Homo sapiens]
Length = 317
Score = 67.8 bits (164), Expect = 2e-11
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 149 PSPPGSKSATPSPSSSTQEEESEVHFKISGEKRPSA--------DPGKKAKNPKKKKKKD 200
P PG+ +A + Q V K + P A +P KK PK KK+K
Sbjct: 5 PKQPGAAAAPAGGKAPGQHGGFVVTVKQERGEGPRAGEKGSHEEEPVKKRGWPKGKKRKK 64
Query: 201 --PNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTE 258
PN P+ PV+ Y F + + I+ ++P F +++K++ + W L +KQ Y + E
Sbjct: 65 ILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAE 124
Query: 259 AAKKEYLKALAAYRASLVSKSSPDQGETK 287
K++Y+K L AY+ S K ++ + K
Sbjct: 125 REKQQYMKELRAYQQSEAYKMCTEKIQEK 153
>gi|169212060 PREDICTED: high mobility group protein B3-like
protein-like [Homo sapiens]
Length = 207
Score = 66.2 bits (160), Expect = 6e-11
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 154 SKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYAL 213
SK + + +++E+S+ + +K K K KKKDPN P++P S + L
Sbjct: 42 SKKCSERWKTMSKKEKSKFNELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFL 101
Query: 214 FFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRA 273
F + K NP GDV+K + MW +L + +KQ Y + K++Y K +A Y++
Sbjct: 102 FCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKS 161
Query: 274 SLVSKSSPDQGETKSTQ 290
KS +G K Q
Sbjct: 162 K--GKSDGAKGPAKVAQ 176
Score = 41.6 bits (96), Expect = 0.002
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSA--TFGDVSKIVASMWDSLGEEQKQAYKR 255
K DP +P+ +SAYA F + + K +NP F + SK + W ++ +++K +
Sbjct: 3 KGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNE 62
Query: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
+A K Y + + Y P +G K +P A PP
Sbjct: 63 LAKADKVHYDQEIKDY--------GPAKGGKKK---DPNAPKRPP 96
>gi|239745831 PREDICTED: high mobility group protein B3-like
protein-like [Homo sapiens]
Length = 207
Score = 66.2 bits (160), Expect = 6e-11
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 154 SKSATPSPSSSTQEEESEVHFKISGEKRPSADPGKKAKNPKKKKKKDPNEPQKPVSAYAL 213
SK + + +++E+S+ + +K K K KKKDPN P++P S + L
Sbjct: 42 SKKCSERWKTMSKKEKSKFNELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFL 101
Query: 214 FFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRA 273
F + K NP GDV+K + MW +L + +KQ Y + K++Y K +A Y++
Sbjct: 102 FCSEFCPKSKSTNPGIPIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKS 161
Query: 274 SLVSKSSPDQGETKSTQ 290
KS +G K Q
Sbjct: 162 K--GKSDGAKGPAKVAQ 176
Score = 41.6 bits (96), Expect = 0.002
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSA--TFGDVSKIVASMWDSLGEEQKQAYKR 255
K DP +P+ +SAYA F + + K +NP F + SK + W ++ +++K +
Sbjct: 3 KGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNE 62
Query: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPP 300
+A K Y + + Y P +G K +P A PP
Sbjct: 63 LAKADKVHYDQEIKDY--------GPAKGGKKK---DPNAPKRPP 96
>gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]
Length = 984
Score = 66.2 bits (160), Expect = 6e-11
Identities = 109/406 (26%), Positives = 155/406 (38%), Gaps = 45/406 (11%)
Query: 45 DHEASYHSLCHGLTPNGLLPAYSYQAMDLPAIMVSNMLAQDSHLLSGQLPTIQEMVHSEV 104
D S HS L NG+ ++ + L + N + D HL + + S
Sbjct: 79 DSSGSGHSAFEPLVANGVPASFVPKPGSLKRGL--NSQSSDDHL---NKRSRSSSMSSLT 133
Query: 105 AAYDSGRPGPLLGRPAMLASHMSALSQSQLISQMGIRSSIAHSSPSPPGSKSATPS-PSS 163
AY SG P R A+ +S+ S SQL + G SS SP S+S TP P+
Sbjct: 134 GAYASGIPSS--SRNAITSSYSSTRGISQLWKRNGPSSS---PFSSPASSRSQTPERPAK 188
Query: 164 STQEEESEVHFKISGEKRPSA----DPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQ 219
+EEE H S P A G+KA + +KK++ N P S+ R Q
Sbjct: 189 KIREEELCHH---SSSSTPLAADRESQGEKAADTTPRKKQNSNSQSTPGSS-GQRKRKVQ 244
Query: 220 AAIKGQNPSATFGDVSKIVASMW-DSLGEEQK-------QAYKRKTEAAKKEYLKALAAY 271
+ T ++ S+ + L E+K QA + K++AA +
Sbjct: 245 LLPSRRGEQLTLPPPPQLGYSITAEDLDLEKKASLQWFNQALEDKSDAASNSVTETPPIT 304
Query: 272 RASLVSKSSPDQGETKSTQANPPAKMLPPK-QPMYAMPGLASFLTPSDLQAFRSGASPAS 330
+ S + A+PP +L P P+ + L TP L A A+
Sbjct: 305 QPSFTFTLPA------AAPASPPTSLLAPSTNPL--LESLKKMQTPPSLPPCPESAGAAT 356
Query: 331 LARTLGSK--SLLPGLSASPPPPPSFPLSPTLHQQLSLPPHAQGALLSPPVSMSPAPQ-- 386
K SLLP L S PP SP+ S PP L+ P SM PA
Sbjct: 357 TEALSPPKTPSLLPPLGLSQSGPPGLLPSPSFD---SKPPTTLLGLIPAP-SMVPATDTK 412
Query: 387 -PPVLPTPMALQVQLAMSPSPPGPQDFPHISEFPSSSGSCSPGPSN 431
PP L A + Q +PSP Q F ++ S S +P S+
Sbjct: 413 APPTLQAETATKPQATSAPSPAPKQSFLFGTQNTSPSSPAAPAASS 458
>gi|169184027 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 208
Score = 65.5 bits (158), Expect = 1e-10
Identities = 30/73 (41%), Positives = 44/73 (60%)
Query: 194 KKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAY 253
K KKKDPN P++P S + LF + + IK NP + GDV+K + MW++L + +KQ Y
Sbjct: 82 KGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY 141
Query: 254 KRKTEAAKKEYLK 266
K K++Y K
Sbjct: 142 VTKAAKLKEKYEK 154
Score = 34.3 bits (77), Expect = 0.25
Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 18/141 (12%)
Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPS--ATFGDVSKIVASMWDSLGEEQKQAYKR 255
K DP +PQ +SAYA + K +NP F + SK + W ++ ++K +
Sbjct: 3 KGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKFGE 62
Query: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 315
+A + Y + D G K + P PK+P S
Sbjct: 63 MAKADEVCY------------DREMKDYGPAKGGKKKDPN---APKRPPSGFFLFCSEFR 107
Query: 316 PSDLQAFRSGASPASLARTLG 336
P +++ G S +A+ LG
Sbjct: 108 PK-IKSTNPGISIGDVAKKLG 127
>gi|113421073 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 208
Score = 65.5 bits (158), Expect = 1e-10
Identities = 30/73 (41%), Positives = 44/73 (60%)
Query: 194 KKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAY 253
K KKKDPN P++P S + LF + + IK NP + GDV+K + MW++L + +KQ Y
Sbjct: 82 KGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY 141
Query: 254 KRKTEAAKKEYLK 266
K K++Y K
Sbjct: 142 VTKAAKLKEKYEK 154
Score = 34.3 bits (77), Expect = 0.25
Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 18/141 (12%)
Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPS--ATFGDVSKIVASMWDSLGEEQKQAYKR 255
K DP +PQ +SAYA + K +NP F + SK + W ++ ++K +
Sbjct: 3 KGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKFGE 62
Query: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 315
+A + Y + D G K + P PK+P S
Sbjct: 63 MAKADEVCY------------DREMKDYGPAKGGKKKDPN---APKRPPSGFFLFCSEFR 107
Query: 316 PSDLQAFRSGASPASLARTLG 336
P +++ G S +A+ LG
Sbjct: 108 PK-IKSTNPGISIGDVAKKLG 127
>gi|113420668 PREDICTED: similar to high mobility group box 3 [Homo
sapiens]
Length = 208
Score = 65.5 bits (158), Expect = 1e-10
Identities = 30/73 (41%), Positives = 44/73 (60%)
Query: 194 KKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAY 253
K KKKDPN P++P S + LF + + IK NP + GDV+K + MW++L + +KQ Y
Sbjct: 82 KGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY 141
Query: 254 KRKTEAAKKEYLK 266
K K++Y K
Sbjct: 142 VTKAAKLKEKYEK 154
Score = 34.3 bits (77), Expect = 0.25
Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 18/141 (12%)
Query: 198 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPS--ATFGDVSKIVASMWDSLGEEQKQAYKR 255
K DP +PQ +SAYA + K +NP F + SK + W ++ ++K +
Sbjct: 3 KGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKFGE 62
Query: 256 KTEAAKKEYLKALAAYRASLVSKSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLT 315
+A + Y + D G K + P PK+P S
Sbjct: 63 MAKADEVCY------------DREMKDYGPAKGGKKKDPN---APKRPPSGFFLFCSEFR 107
Query: 316 PSDLQAFRSGASPASLARTLG 336
P +++ G S +A+ LG
Sbjct: 108 PK-IKSTNPGISIGDVAKKLG 127
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.125 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,028,420
Number of Sequences: 37866
Number of extensions: 1529428
Number of successful extensions: 18387
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 1254
Number of HSP's that attempted gapping in prelim test: 10818
Number of HSP's gapped (non-prelim): 5918
length of query: 464
length of database: 18,247,518
effective HSP length: 106
effective length of query: 358
effective length of database: 14,233,722
effective search space: 5095672476
effective search space used: 5095672476
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.