TRIM35 37481

Name: TRIM35	Sequence: fasta or formatted (493aa)		NCBI GI: 94536782
Description: tripartite motif-containing 35 isoform 2		Referenced in: Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 35 2 C cysteine 4.7 23 2 D aspartate 4.9 24 2 E glutamate 9.5 47 2 F phenylalanine 4.1 20 1 G glycine 5.7 28 2 H histidine 4.1 20 1 I isoleucine 1.6 8 1 K lysine 4.3 21 2 L leucine 9.3 46 2 M methionine 2.2 11 1 N asparagine 1.8 9 2 P proline 4.9 24 2 Q glutamine 3.9 19 1 R arginine 9.5 47 2 S serine 7.1 35 2 T threonine 3.7 18 1 V valine 7.5 37 2 W tryptophan 1.8 9 1 Y tyrosine 2.4 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 35 isoform 2 TRIM11 0.171 tripartite motif-containing 11 TRIM21 0.157 tripartite motif protein 21 TRIM39 0.155 tripartite motif-containing 39 isoform 2 TRIM60 0.152 ring finger protein 129 TRIM75 0.152 tripartite motif-containing 75 TRIM27 0.151 ret finger protein TRIM62 0.150 tripartite motif-containing 62 TRIM39 0.148 tripartite motif-containing 39 isoform 1 TRIM58 0.146 tripartite motif-containing 58 TRIM69 0.140 tripartite motif-containing 69 isoform a TRIM7 0.140 tripartite motif-containing 7 isoform 1 TRIM68 0.138 ring finger protein 137 TRIM50 0.133 tripartite motif protein 50A TRIM17 0.127 tripartite motif-containing 17 isoform 1 TRIM17 0.127 tripartite motif-containing 17 isoform 1 TRIM4 0.119 tripartite motif protein TRIM4 isoform beta TRIM10 0.118 tripartite motif-containing 10 isoform 1 TRIM38 0.115 tripartite motif-containing 38 TRIM6 0.113 tripartite motif-containing 6 isoform 2 TRIM6 0.113 tripartite motif-containing 6 isoform 1 TRIM41 0.111 tripartite motif-containing 41 isoform 1 TRIM4 0.109 tripartite motif protein TRIM4 isoform alpha TRIM72 0.109 tripartite motif-containing 72 TRIM17 0.108 tripartite motif-containing 17 isoform 2 TRIML1 0.105 tripartite motif family-like 1 TRIM43 0.103 tripartite motif-containing 43 LOC653192 0.103 PREDICTED: Tripartite motif-containing protein 43-li... TRIM10 0.101 tripartite motif-containing 10 isoform 2 TRIM22 0.101 tripartite motif-containing 22 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.