TRIM60 15584

Name: TRIM60	Sequence: fasta or formatted (471aa)		NCBI GI: 22749269
Description: ring finger protein 129		Referenced in: Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.8 13 2 C cysteine 4.2 20 1 D aspartate 4.2 20 2 E glutamate 7.9 37 2 F phenylalanine 4.9 23 1 G glycine 3.8 18 2 H histidine 2.1 10 2 I isoleucine 5.5 26 2 K lysine 7.9 37 3 L leucine 11.0 52 2 M methionine 1.5 7 1 N asparagine 4.9 23 2 P proline 4.7 22 2 Q glutamine 5.3 25 1 R arginine 6.4 30 2 S serine 7.6 36 2 T threonine 3.6 17 2 V valine 6.2 29 2 W tryptophan 1.3 6 1 Y tyrosine 4.2 20 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ring finger protein 129 TRIM75 0.429 tripartite motif-containing 75 TRIM39 0.388 tripartite motif-containing 39 isoform 2 TRIM39 0.371 tripartite motif-containing 39 isoform 1 TRIM58 0.266 tripartite motif-containing 58 TRIM11 0.264 tripartite motif-containing 11 TRIM21 0.259 tripartite motif protein 21 TRIM27 0.257 ret finger protein TRIM61 0.237 tripartite motif-containing 61 TRIM17 0.232 tripartite motif-containing 17 isoform 1 TRIM17 0.232 tripartite motif-containing 17 isoform 1 TRIM68 0.232 ring finger protein 137 TRIM34 0.226 tripartite motif protein 34 isoform 1 TRIM34 0.226 tripartite motif protein 34 isoform 1 TRIM6-TRIM34 0.226 tripartite motif-containing 6 and tripartite motif-c... TRIM38 0.216 tripartite motif-containing 38 TRIM6 0.212 tripartite motif-containing 6 isoform 2 TRIM6 0.212 tripartite motif-containing 6 isoform 1 TRIM5 0.211 tripartite motif protein TRIM5 isoform alpha TRIML1 0.209 tripartite motif family-like 1 TRIM41 0.209 tripartite motif-containing 41 isoform 1 TRIM4 0.203 tripartite motif protein TRIM4 isoform beta TRIM17 0.202 tripartite motif-containing 17 isoform 2 TRIM10 0.199 tripartite motif-containing 10 isoform 1 TRIM22 0.196 tripartite motif-containing 22 TRIM7 0.196 tripartite motif-containing 7 isoform 1 TRIM4 0.194 tripartite motif protein TRIM4 isoform alpha TRIM69 0.192 tripartite motif-containing 69 isoform a MEFV 0.176 Mediterranean fever protein TRIM43 0.173 tripartite motif-containing 43 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.