Guide to the Human Genome
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Name: LOC645146 Sequence: fasta or formatted (76aa) NCBI GI: 88943446
Description:

PREDICTED: similar to Kinase suppressor of Ras 1

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5          8           3
 C cysteine            5.3          4           1
 D aspartate           2.6          2           1
 E glutamate           6.6          5           1
 F phenylalanine       2.6          2           1
 G glycine            17.1         13           5
 H histidine           2.6          2           2
 I isoleucine          7.9          6           1
 K lysine              5.3          4           2
 L leucine            10.5          8           1
 M methionine          1.3          1           1
 N asparagine          2.6          2           1
 P proline             1.3          1           1
 Q glutamine           9.2          7           2
 R arginine            1.3          1           1
 S serine              3.9          3           1
 T threonine           6.6          5           1
 V valine              2.6          2           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to Kinase suppressor of Ras 1 [Ho... 
LOC401847             0.364   PREDICTED: similar to hCG1793095 
KSR2                  0.114   kinase suppressor of ras 2 
TBC1D2B               0.045   TBC1 domain family, member 2B isoform a 
TBC1D2B               0.045   TBC1 domain family, member 2B isoform b 
SCRT2                 0.038   scratch 2 protein 
NPAS3                 0.038   neuronal PAS domain protein 3 isoform 2 
NPAS3                 0.038   neuronal PAS domain protein 3 isoform 1 
LOC100131851          0.030   PREDICTED: hypothetical protein 
LOC100131851          0.030   PREDICTED: hypothetical protein 
LOC100130751          0.030   PREDICTED: hypothetical protein 
FOXA3                 0.023   forkhead box A3 
AGAP2                 0.023   centaurin, gamma 1 isoform PIKE-L 
HOXD13                0.023   homeobox D13 
OR8D4                 0.023   olfactory receptor, family 8, subfamily D, member 4 ...
TRIM33                0.015   tripartite motif-containing 33 protein isoform beta ...
TRIM33                0.015   tripartite motif-containing 33 protein isoform alpha...
FBXO33                0.015   F-box protein 33 
ARID1A                0.015   AT rich interactive domain 1A isoform a 
ARID1A                0.015   AT rich interactive domain 1A isoform b 
ASXL1                 0.015   additional sex combs like 1 
SH3GLB1               0.015   SH3-containing protein SH3GLB1 
OR8D1                 0.015   olfactory receptor, family 8, subfamily D, member 1 ...
KRT76                 0.015   keratin 76 
PITPNM2               0.015   phosphatidylinositol transfer protein, membrane-asso...
SOX11                 0.015   SRY-box 11 
KCNQ3                 0.015   potassium voltage-gated channel KQT-like protein 3 [H...
SLC7A8                0.015   solute carrier family 7 (cationic amino acid transpo...
ARID1B                0.015   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.015   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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