HOXD13 1871

Name: HOXD13	Sequence: fasta or formatted (343aa)		NCBI GI: 116734702
Description: homeobox D13		Referenced in: HOX Genes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 15.7 54 15 C cysteine 1.5 5 1 D aspartate 3.2 11 1 E glutamate 3.8 13 1 F phenylalanine 3.2 11 1 G glycine 9.3 32 3 H histidine 2.0 7 1 I isoleucine 2.0 7 1 K lysine 5.2 18 2 L leucine 4.1 14 1 M methionine 2.0 7 1 N asparagine 3.2 11 1 P proline 6.7 23 2 Q glutamine 3.8 13 2 R arginine 5.5 19 3 S serine 13.1 45 8 T threonine 3.5 12 1 V valine 5.8 20 2 W tryptophan 1.5 5 1 Y tyrosine 4.7 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 homeobox D13 HOXA13 0.370 homeobox A13 HOXC13 0.358 homeobox C13 HOXB13 0.289 homeobox B13 HOXD11 0.106 homeobox D11 HOXD12 0.088 homeobox D12 HOXA11 0.082 homeobox A11 HOXC11 0.082 homeobox C11 HOXC12 0.081 homeobox C12 HOXD9 0.079 homeobox D9 HOXB9 0.075 homeobox B9 HOXA10 0.073 homeobox A10 isoform a HOXD10 0.072 homeobox D10 HOXC9 0.072 homeobox C9 HOXA9 0.072 homeobox A9 HOXC10 0.070 homeobox C10 HOXA10 0.070 homeobox A10 isoform b PDX1 0.066 pancreatic and duodenal homeobox 1 MNX1 0.063 homeo box HB9 HOXB8 0.058 homeobox B8 HOXC8 0.057 homeobox C8 GSX2 0.057 GS homeobox 2 MEOX1 0.055 mesenchyme homeobox 1 isoform 3 MEOX1 0.055 mesenchyme homeobox 1 isoform 1 HOXA2 0.055 homeobox A2 HOXA5 0.055 homeobox A5 GSX1 0.055 GS homeobox 1 HOXB2 0.055 homeobox B2 HOXB5 0.054 homeobox B5 HOXD8 0.054 homeobox D8 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.