Guide to the Human Genome
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Name: TBC1D2B Sequence: fasta or formatted (914aa) NCBI GI: 194018476
Description:

TBC1 domain family, member 2B isoform b

Referenced in:

Rab

Other entries for this name:
alt prot [963aa] TBC1 domain family, member 2B isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         54           3
 C cysteine            1.3         12           1
 D aspartate           5.1         47           2
 E glutamate           8.6         79           3
 F phenylalanine       3.8         35           1
 G glycine             6.5         59           5
 H histidine           1.8         16           1
 I isoleucine          3.2         29           2
 K lysine              7.0         64           3
 L leucine            11.1        101           2
 M methionine          1.5         14           2
 N asparagine          3.6         33           2
 P proline             5.8         53           3
 Q glutamine           5.8         53           2
 R arginine            5.9         54           2
 S serine              7.3         67           2
 T threonine           4.7         43           2
 V valine              5.8         53           2
 W tryptophan          1.6         15           1
 Y tyrosine            3.6         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TBC1 domain family, member 2B isoform b 
TBC1D2B               0.981   TBC1 domain family, member 2B isoform a 
TBC1D2                0.297   TBC1 domain family, member 2 
SGSM3                 0.096   small G protein signaling modulator 3 
TBC1D9                0.070   TBC1 domain family, member 9 (with GRAM domain) [Ho...
TBC1D8B               0.067   TBC1 domain family, member 8B (with GRAM domain) iso...
TBC1D8                0.066   TBC1 domain family, member 8 
GRTP1                 0.063   growth hormone regulated TBC protein 1 
TBC1D9B               0.062   TBC1 domain family, member 9B (with GRAM domain) iso...
TBC1D9B               0.062   TBC1 domain family, member 9B (with GRAM domain) iso...
TBC1D10C              0.055   TBC1 domain family, member 10C 
TBC1D10B              0.053   TBC1 domain family, member 10B 
EVI5L                 0.051   ecotropic viral integration site 5-like isoform 1 [...
EVI5L                 0.051   ecotropic viral integration site 5-like isoform 2 [H...
TBC1D10A              0.050   TBC1 domain family, member 10A 
EVI5                  0.049   ecotropic viral integration site 5 
RABGAP1L              0.047   RAB GTPase activating protein 1-like isoform A [Homo...
TBC1D30               0.045   PREDICTED: TBC1 domain family, member 30 
TBC1D30               0.045   PREDICTED: TBC1 domain family, member 30 
TBC1D30               0.045   PREDICTED: TBC1 domain family, member 30 
TBC1D1                0.044   TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member...
RABGAP1               0.043   RAB GTPase activating protein 1 
USP6NL                0.041   USP6 N-terminal like isoform 2 
TBC1D8B               0.041   TBC1 domain family, member 8B (with GRAM domain) iso...
TBC1D4                0.041   TBC1 domain family, member 4 
USP6NL                0.041   USP6 N-terminal like isoform 1 
TBC1D3F               0.033   TBC1 domain family, member 3F 
TBC1D3H               0.033   TBC1 domain family, member 3H 
TBC1D3G               0.033   TBC1 domain family, member 3G 
USP6                  0.033   ubiquitin specific protease 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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