Search of human proteins with 78486586

Search of human proteins with 78486586

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|78486586 bolA-like 3 isoform 1 [Homo sapiens]
         (107 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|78486586 bolA-like 3 isoform 1 [Homo sapiens]                      214   9e-57
gi|78486578 bolA-like 3 isoform 2 [Homo sapiens]                      115   6e-27
gi|73622130 BolA-like protein 2 [Homo sapiens]                         37   0.003
gi|85797673 bolA-like protein 2B [Homo sapiens]                        37   0.003
gi|126116589 fibrocystin L [Homo sapiens]                              29   0.93 
gi|153945755 zinc finger protein 608 [Homo sapiens]                    27   3.5  
gi|42542392 CCAAT/enhancer binding protein zeta [Homo sapiens]         27   4.6  
gi|71979663 growth factor receptor-bound protein 14 [Homo sapiens]     27   4.6  
gi|7705638 bolA-like 1 [Homo sapiens]                                  27   4.6  
gi|224593754 AXIN1 up-regulated 1 [Homo sapiens]                       26   6.1  
gi|239747212 PREDICTED: hypothetical protein XP_002346939 [Homo ...    26   6.1  
gi|41349472 PR domain containing 16 isoform 2 [Homo sapiens]           26   6.1  
gi|41349470 PR domain containing 16 isoform 1 [Homo sapiens]           26   6.1  
gi|22547189 serine hydroxymethyltransferase 1 (soluble) isoform ...    26   6.1  
gi|22547186 serine hydroxymethyltransferase 1 (soluble) isoform ...    26   6.1  
gi|223468634 envoplakin-like [Homo sapiens]                            26   6.1  
gi|122937416 hypothetical protein LOC85452 [Homo sapiens]              26   7.9  
gi|4758178 dynein, cytoplasmic 1, intermediate chain 1 isoform a...    26   7.9  
gi|207113124 dynein, cytoplasmic 1, intermediate chain 1 isoform...    26   7.9  
gi|207113122 dynein, cytoplasmic 1, intermediate chain 1 isoform...    26   7.9  
gi|190194384 spermatogenesis associated 16 [Homo sapiens]              26   7.9  

>gi|78486586 bolA-like 3 isoform 1 [Homo sapiens]
          Length = 107

 Score =  214 bits (546), Expect = 9e-57
 Identities = 107/107 (100%), Positives = 107/107 (100%)

Query: 1   MAAWSPAAAAPLLRGIRGLPLHHRMFATQTEGELRVTQILKEKFPRATAIKVTDISGGCG 60
           MAAWSPAAAAPLLRGIRGLPLHHRMFATQTEGELRVTQILKEKFPRATAIKVTDISGGCG
Sbjct: 1   MAAWSPAAAAPLLRGIRGLPLHHRMFATQTEGELRVTQILKEKFPRATAIKVTDISGGCG 60

Query: 61  AMYEIKIESEEFKEKRTVQQHQMVNQALKEEIKEMHGLRIFTSVPKR 107
           AMYEIKIESEEFKEKRTVQQHQMVNQALKEEIKEMHGLRIFTSVPKR
Sbjct: 61  AMYEIKIESEEFKEKRTVQQHQMVNQALKEEIKEMHGLRIFTSVPKR 107


>gi|78486578 bolA-like 3 isoform 2 [Homo sapiens]
          Length = 101

 Score =  115 bits (289), Expect = 6e-27
 Identities = 57/57 (100%), Positives = 57/57 (100%)

Query: 1  MAAWSPAAAAPLLRGIRGLPLHHRMFATQTEGELRVTQILKEKFPRATAIKVTDISG 57
          MAAWSPAAAAPLLRGIRGLPLHHRMFATQTEGELRVTQILKEKFPRATAIKVTDISG
Sbjct: 1  MAAWSPAAAAPLLRGIRGLPLHHRMFATQTEGELRVTQILKEKFPRATAIKVTDISG 57


>gi|73622130 BolA-like protein 2 [Homo sapiens]
          Length = 152

 Score = 37.4 bits (85), Expect = 0.003
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 4/72 (5%)

Query: 38  QILKEKFPR---ATAIKVTDIS-GGCGAMYEIKIESEEFKEKRTVQQHQMVNQALKEEIK 93
           + L+EK  R   A  ++V D +   C   + + + S +F+ K  +Q+H++VN  L EE+ 
Sbjct: 72  EYLREKLQRDLEAEHVEVEDTTLNRCSCSFRVLVVSAKFEGKPLLQRHRLVNACLAEELP 131

Query: 94  EMHGLRIFTSVP 105
            +H     T  P
Sbjct: 132 HIHAFEQKTLTP 143


>gi|85797673 bolA-like protein 2B [Homo sapiens]
          Length = 152

 Score = 37.4 bits (85), Expect = 0.003
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 4/72 (5%)

Query: 38  QILKEKFPR---ATAIKVTDIS-GGCGAMYEIKIESEEFKEKRTVQQHQMVNQALKEEIK 93
           + L+EK  R   A  ++V D +   C   + + + S +F+ K  +Q+H++VN  L EE+ 
Sbjct: 72  EYLREKLQRDLEAEHVEVEDTTLNRCSCSFRVLVVSAKFEGKPLLQRHRLVNACLAEELP 131

Query: 94  EMHGLRIFTSVP 105
            +H     T  P
Sbjct: 132 HIHAFEQKTLTP 143


>gi|126116589 fibrocystin L [Homo sapiens]
          Length = 4243

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 9/62 (14%)

Query: 2    AAWSPAAAAPLLRGIRGLPLHHRMFATQTEGELRVTQILK----EKFPRATAIKVTDISG 57
            + W    A P+ R     P+HH  F +     L +TQ +     + FP+  ++K TD  G
Sbjct: 4057 SGWIKVTAQPVERS--AFPVHHVAFVSSL---LVITQPVAAQPGQPFPQQPSVKATDSDG 4111

Query: 58   GC 59
             C
Sbjct: 4112 NC 4113


>gi|153945755 zinc finger protein 608 [Homo sapiens]
          Length = 1512

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 29   QTEGELRVTQILKEKFPRATAIKVTDISGGCGAMYEIKIESEEFK--EKRTVQQHQMVNQ 86
            Q   EL   + LKE  PR T  K + +     ++  IK E +E K  + +++++ ++ N 
Sbjct: 1255 QKSEELDREKKLKEDSPRKTPNKESGVPSLPVSLTSIKEEPKEAKHPDSQSMEESKLKND 1314

Query: 87   ALKEEI--KEMHGLRIFTSVP 105
              K  +  K+  G R+  S P
Sbjct: 1315 DRKTPVNWKDSRGTRVAVSSP 1335


>gi|42542392 CCAAT/enhancer binding protein zeta [Homo sapiens]
          Length = 1054

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 13  LRGIRGLPLHHRMFATQTEGELRVTQILKEKFPRATAIKVTDISGGCGAMYEIKIESEEF 72
           ++ IR LP++ + F  + E ++ V ++   ++ +  A+K            E  ++ EEF
Sbjct: 786 IKDIRHLPVNSKEFLAKEESQIPVDEVFFHRYYKKVAVKEKQKRDADEESIE-DVDDEEF 844

Query: 73  KE 74
           +E
Sbjct: 845 EE 846


>gi|71979663 growth factor receptor-bound protein 14 [Homo sapiens]
          Length = 540

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 12/22 (54%), Positives = 15/22 (68%)

Query: 20  PLHHRMFATQTEGELRVTQILK 41
           P H   FAT+T GE+  TQIL+
Sbjct: 205 PEHMVSFATETNGEISPTQILQ 226


>gi|7705638 bolA-like 1 [Homo sapiens]
          Length = 137

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 58  GCGAMYEIKIESEEFKEKRTVQQHQMVNQALKEEI-KEMHGLRIFTSVP 105
           G    + + + S  F+    +Q+H++V+ AL EE+   +H L I    P
Sbjct: 63  GSETHFRVAVVSSRFEGLSPLQRHRLVHAALAEELGGPVHALAIQARTP 111


>gi|224593754 AXIN1 up-regulated 1 [Homo sapiens]
          Length = 589

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 6/58 (10%)

Query: 44  FPRATAIKVTDISGGCGAMYEIKIES------EEFKEKRTVQQHQMVNQALKEEIKEM 95
           FPR          GGC     ++  +       EF +++   +H+ + Q LKEE  EM
Sbjct: 94  FPRCQGFTSVPSRGGCTLGMALRHSACRRFSLAEFAQEQARARHEKLRQRLKEEKLEM 151


>gi|239747212 PREDICTED: hypothetical protein XP_002346939 [Homo
           sapiens]
          Length = 1158

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 47  ATAIKVTDISGGCGAMYEIKIESEEFKEKRTVQQHQMVNQALKE 90
           A  +K   + GG G  +E K     F  K +++QH +++   +E
Sbjct: 166 AEELKPEGLGGGSGQAHECKDCERMFPNKYSLEQHMVIHTEERE 209


>gi|41349472 PR domain containing 16 isoform 2 [Homo sapiens]
          Length = 1256

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 47  ATAIKVTDISGGCGAMYEIKIESEEFKEKRTVQQHQMVNQALKE 90
           A  +K   + GG G  +E K     F  K +++QH +++   +E
Sbjct: 265 AEELKPEGLGGGSGQAHECKDCERMFPNKYSLEQHMVIHTEERE 308


>gi|41349470 PR domain containing 16 isoform 1 [Homo sapiens]
          Length = 1275

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 47  ATAIKVTDISGGCGAMYEIKIESEEFKEKRTVQQHQMVNQALKE 90
           A  +K   + GG G  +E K     F  K +++QH +++   +E
Sbjct: 265 AEELKPEGLGGGSGQAHECKDCERMFPNKYSLEQHMVIHTEERE 308


>gi|22547189 serine hydroxymethyltransferase 1 (soluble) isoform 2
           [Homo sapiens]
          Length = 444

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 12/41 (29%), Positives = 22/41 (53%)

Query: 65  IKIESEEFKEKRTVQQHQMVNQALKEEIKEMHGLRIFTSVP 105
           ++   +EFKE+    ++Q   QAL+EE++    L     +P
Sbjct: 402 VRATLKEFKERLAGDKYQAAVQALREEVESFASLFPLPGLP 442


>gi|22547186 serine hydroxymethyltransferase 1 (soluble) isoform 1
           [Homo sapiens]
          Length = 483

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 12/41 (29%), Positives = 22/41 (53%)

Query: 65  IKIESEEFKEKRTVQQHQMVNQALKEEIKEMHGLRIFTSVP 105
           ++   +EFKE+    ++Q   QAL+EE++    L     +P
Sbjct: 441 VRATLKEFKERLAGDKYQAAVQALREEVESFASLFPLPGLP 481


>gi|223468634 envoplakin-like [Homo sapiens]
          Length = 301

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 65  IKIESEEFKEKRTVQQHQMVNQALKEEIKEMHGLR 99
           ++ E E FK+   + Q Q VNQ L+E+ K M  LR
Sbjct: 219 VRREYEHFKQHELLSQEQSVNQ-LEEDGKRMVELR 252


>gi|122937416 hypothetical protein LOC85452 [Homo sapiens]
          Length = 762

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 8/31 (25%), Positives = 23/31 (74%)

Query: 64  EIKIESEEFKEKRTVQQHQMVNQALKEEIKE 94
           E++ +   F+E++ +++ +++++ LKEE +E
Sbjct: 343 ELEAQKRAFEEEQKLRKQEIISRILKEEAEE 373


>gi|4758178 dynein, cytoplasmic 1, intermediate chain 1 isoform a
           [Homo sapiens]
          Length = 645

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 68  ESEEFKEKRTVQQHQMVNQALKEEIKE 94
           E EE  E +  Q  ++ NQ  K+E+KE
Sbjct: 184 EDEEMVESKVGQDSELENQDKKQEVKE 210


>gi|207113124 dynein, cytoplasmic 1, intermediate chain 1 isoform c
           [Homo sapiens]
          Length = 608

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 68  ESEEFKEKRTVQQHQMVNQALKEEIKE 94
           E EE  E +  Q  ++ NQ  K+E+KE
Sbjct: 147 EDEEMVESKVGQDSELENQDKKQEVKE 173


>gi|207113122 dynein, cytoplasmic 1, intermediate chain 1 isoform b
           [Homo sapiens]
          Length = 628

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 68  ESEEFKEKRTVQQHQMVNQALKEEIKE 94
           E EE  E +  Q  ++ NQ  K+E+KE
Sbjct: 167 EDEEMVESKVGQDSELENQDKKQEVKE 193


>gi|190194384 spermatogenesis associated 16 [Homo sapiens]
          Length = 569

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 8/82 (9%)

Query: 17  RGLPL---HHRMFATQTEGELRVTQIL-KEKFPRATAIKVTDISGG----CGAMYEIKIE 68
           R LP+   H   F    E  +R  + + K   P    I+ T ++G      G M +++  
Sbjct: 403 RKLPIFTEHKTPFGLTREDTVRQMETMGKRILPILDFIRSTQLNGSFPASSGVMEKLQYA 462

Query: 69  SEEFKEKRTVQQHQMVNQALKE 90
           S   + +R  +Q Q++NQA+ E
Sbjct: 463 SLLSQLQRVKEQSQVINQAMAE 484


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.132    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,775,385
Number of Sequences: 37866
Number of extensions: 134580
Number of successful extensions: 482
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 468
Number of HSP's gapped (non-prelim): 21
length of query: 107
length of database: 18,247,518
effective HSP length: 77
effective length of query: 30
effective length of database: 15,331,836
effective search space: 459955080
effective search space used: 459955080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.