SHMT1 15127

Name: SHMT1	Sequence: fasta or formatted (483aa)		NCBI GI: 22547186
Description: serine hydroxymethyltransferase 1 (soluble) isoform 1		Referenced in: Amino Acid Catabolism Amino Acid Biosynthesis and Selected Derivatives Vitamin Pathways, Coenzymes, and 1-Carbon Metabolism
Other entries for this name: alt prot [444aa] serine hydroxymethyltransferase 1 (soluble) isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.1 44 2 C cysteine 2.1 10 1 D aspartate 4.8 23 1 E glutamate 6.2 30 2 F phenylalanine 3.5 17 2 G glycine 8.5 41 2 H histidine 3.3 16 1 I isoleucine 4.6 22 2 K lysine 6.2 30 3 L leucine 10.6 51 2 M methionine 2.1 10 1 N asparagine 4.1 20 2 P proline 4.6 22 1 Q glutamine 3.5 17 1 R arginine 5.0 24 1 S serine 6.2 30 2 T threonine 5.2 25 4 V valine 6.2 30 2 W tryptophan 0.4 2 1 Y tyrosine 3.9 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 serine hydroxymethyltransferase 1 (soluble) isoform ... SHMT1 0.898 serine hydroxymethyltransferase 1 (soluble) isoform ... SHMT2 0.620 serine hydroxymethyltransferase 2 (mitochondrial) [H... SUPT5H 0.008 suppressor of Ty 5 homolog isoform a SUPT5H 0.008 suppressor of Ty 5 homolog isoform a SUPT5H 0.008 suppressor of Ty 5 homolog isoform a SLC9A1 0.004 solute carrier family 9, isoform A1 SUPT5H 0.004 suppressor of Ty 5 homolog isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.