Guide to the Human Genome
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Name: BOLA1 Sequence: fasta or formatted (137aa) NCBI GI: 7705638
Description:

bolA-like 1

Referenced in:

Additional Conserved Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.9         15           2
 C cysteine            2.2          3           1
 D aspartate           0.7          1           1
 E glutamate           8.0         11           2
 F phenylalanine       1.5          2           1
 G glycine            11.7         16           2
 H histidine           3.6          5           1
 I isoleucine          2.2          3           1
 K lysine              2.2          3           2
 L leucine            13.1         18           1
 M methionine          1.5          2           1
 N asparagine          2.2          3           1
 P proline             7.3         10           2
 Q glutamine           3.6          5           1
 R arginine            7.3         10           1
 S serine              8.8         12           2
 T threonine           4.4          6           1
 V valine              8.0         11           2
 W tryptophan          0.7          1           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bolA-like 1 
BOLA2                 0.124   BolA-like protein 2 
BOLA2B                0.124   bolA-like protein 2B 
GSDMD                 0.024   gasdermin D 
LOC100290241          0.020   PREDICTED: hypothetical protein XP_002347740 
LOC100288617          0.020   PREDICTED: hypothetical protein XP_002343538 
ZNF319                0.020   zinc finger protein 319 
CASZ1                 0.016   castor homolog 1, zinc finger isoform a 
CASZ1                 0.016   castor homolog 1, zinc finger isoform b 
EXOC3L                0.016   exocyst complex component 3-like 
LOC100127944          0.016   PREDICTED: hypothetical protein 
LOC100127944          0.016   PREDICTED: hypothetical protein 
LOC100127944          0.016   PREDICTED: hypothetical protein 
ZNF513                0.012   zinc finger protein 513 
GLI2                  0.012   GLI-Kruppel family member GLI2 
LOC100131316          0.012   PREDICTED: hypothetical protein 
LOC100131316          0.012   PREDICTED: hypothetical protein 
LOC100131316          0.012   PREDICTED: hypothetical protein 
PHKB                  0.008   phosphorylase kinase, beta isoform b 
PHKB                  0.008   phosphorylase kinase, beta isoform a 
LOC100292340          0.008   PREDICTED: hypothetical protein 
LOC100291090          0.008   PREDICTED: hypothetical protein XP_002346913 
LOC100288256          0.008   PREDICTED: hypothetical protein XP_002342743 
LOC100288256          0.008   PREDICTED: hypothetical protein 
IDH3G                 0.008   isocitrate dehydrogenase 3 (NAD+) gamma isoform b pr...
IDH3G                 0.008   isocitrate dehydrogenase 3 (NAD+) gamma isoform a pre...
BOLA3                 0.008   bolA-like 3 isoform 1 
FBXO41                0.008   F-box protein 41 
ZNF581                0.008   zinc finger protein 581 
FMO3                  0.004   flavin containing monooxygenase 3 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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