Guide to the Human Genome
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Name: BOLA3 Sequence: fasta or formatted (107aa) NCBI GI: 78486586
Description:

bolA-like 3 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {101aa} bolA-like 3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         11           4
 C cysteine            0.9          1           1
 D aspartate           0.9          1           1
 E glutamate          10.3         11           2
 F phenylalanine       3.7          4           1
 G glycine             6.5          7           2
 H histidine           3.7          4           2
 I isoleucine          7.5          8           1
 K lysine              8.4          9           1
 L leucine             7.5          8           2
 M methionine          4.7          5           1
 N asparagine          0.9          1           1
 P proline             4.7          5           1
 Q glutamine           5.6          6           2
 R arginine            7.5          8           1
 S serine              3.7          4           1
 T threonine           6.5          7           1
 V valine              4.7          5           1
 W tryptophan          0.9          1           1
 Y tyrosine            0.9          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   bolA-like 3 isoform 1 
BOLA3                 0.476   bolA-like 3 isoform 2 
BOLA2                 0.063   BolA-like protein 2 
BOLA2B                0.063   bolA-like protein 2B 
PKHD1L1               0.021   fibrocystin L 
ZNF608                0.011   zinc finger protein 608 
CEBPZ                 0.011   CCAAT/enhancer binding protein zeta 
GRB14                 0.011   growth factor receptor-bound protein 14 
BOLA1                 0.011   bolA-like 1 
CSRNP1                0.005   AXIN1 up-regulated 1 
LOC100290519          0.005   PREDICTED: hypothetical protein XP_002346939 
PRDM16                0.005   PR domain containing 16 isoform 2 
PRDM16                0.005   PR domain containing 16 isoform 1 
SHMT1                 0.005   serine hydroxymethyltransferase 1 (soluble) isoform ...
SHMT1                 0.005   serine hydroxymethyltransferase 1 (soluble) isoform ...
EVPLL                 0.005   envoplakin-like 
KIAA1751              0.005   hypothetical protein LOC85452 
DYNC1I1               0.005   dynein, cytoplasmic 1, intermediate chain 1 isoform a...
DYNC1I1               0.005   dynein, cytoplasmic 1, intermediate chain 1 isoform...
DYNC1I1               0.005   dynein, cytoplasmic 1, intermediate chain 1 isoform...
SPATA16               0.005   spermatogenesis associated 16 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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