Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 7705638
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7705638 bolA-like 1 [Homo sapiens]
(137 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7705638 bolA-like 1 [Homo sapiens] 274 1e-74
gi|73622130 BolA-like protein 2 [Homo sapiens] 56 8e-09
gi|85797673 bolA-like protein 2B [Homo sapiens] 56 8e-09
gi|83320070 gasdermin D [Homo sapiens] 31 0.28
gi|239751180 PREDICTED: hypothetical protein XP_002347740 [Homo ... 30 0.48
gi|239745668 PREDICTED: hypothetical protein XP_002343538 [Homo ... 30 0.48
gi|55741868 zinc finger protein 319 [Homo sapiens] 30 0.48
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 29 1.1
gi|119709822 castor homolog 1, zinc finger isoform b [Homo sapiens] 29 1.1
gi|106879204 exocyst complex component 3-like [Homo sapiens] 29 1.1
gi|239754006 PREDICTED: hypothetical protein [Homo sapiens] 29 1.4
gi|239748537 PREDICTED: hypothetical protein [Homo sapiens] 29 1.4
gi|239742520 PREDICTED: hypothetical protein [Homo sapiens] 29 1.4
gi|42476272 zinc finger protein 513 [Homo sapiens] 28 1.8
gi|86991432 GLI-Kruppel family member GLI2 [Homo sapiens] 28 2.4
gi|169164295 PREDICTED: hypothetical protein [Homo sapiens] 28 2.4
gi|239747902 PREDICTED: hypothetical protein [Homo sapiens] 28 2.4
gi|239741797 PREDICTED: hypothetical protein [Homo sapiens] 28 2.4
gi|73611906 phosphorylase kinase, beta isoform b [Homo sapiens] 27 5.3
gi|4505783 phosphorylase kinase, beta isoform a [Homo sapiens] 27 5.3
gi|239754537 PREDICTED: hypothetical protein [Homo sapiens] 27 6.9
gi|239749102 PREDICTED: hypothetical protein XP_002346913 [Homo ... 27 6.9
gi|239743131 PREDICTED: hypothetical protein XP_002342743 [Homo ... 27 6.9
gi|239508788 PREDICTED: hypothetical protein [Homo sapiens] 27 6.9
gi|28178838 isocitrate dehydrogenase 3 (NAD+) gamma isoform b pr... 27 6.9
gi|4758582 isocitrate dehydrogenase 3 (NAD+) gamma isoform a pre... 27 6.9
gi|78486586 bolA-like 3 isoform 1 [Homo sapiens] 27 6.9
gi|122937219 F-box protein 41 [Homo sapiens] 27 6.9
gi|7705495 zinc finger protein 581 [Homo sapiens] 27 6.9
gi|50541961 flavin containing monooxygenase 3 isoform 2 [Homo sa... 26 9.0
>gi|7705638 bolA-like 1 [Homo sapiens]
Length = 137
Score = 274 bits (701), Expect = 1e-74
Identities = 137/137 (100%), Positives = 137/137 (100%)
Query: 1 MLSGRLVLGLVSMAGRVCLCQGSAGSGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAV 60
MLSGRLVLGLVSMAGRVCLCQGSAGSGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAV
Sbjct: 1 MLSGRLVLGLVSMAGRVCLCQGSAGSGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAV 60
Query: 61 PPGSETHFRVAVVSSRFEGLSPLQRHRLVHAALAEELGGPVHALAIQARTPAQWRENSQL 120
PPGSETHFRVAVVSSRFEGLSPLQRHRLVHAALAEELGGPVHALAIQARTPAQWRENSQL
Sbjct: 61 PPGSETHFRVAVVSSRFEGLSPLQRHRLVHAALAEELGGPVHALAIQARTPAQWRENSQL 120
Query: 121 DTSPPCLGGNKKTLGTP 137
DTSPPCLGGNKKTLGTP
Sbjct: 121 DTSPPCLGGNKKTLGTP 137
>gi|73622130 BolA-like protein 2 [Homo sapiens]
Length = 152
Score = 56.2 bits (134), Expect = 8e-09
Identities = 42/111 (37%), Positives = 59/111 (53%), Gaps = 11/111 (9%)
Query: 9 GLVSMAGRVCLCQGSAGSGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGSETHF 68
G+VS+ G C+ S+ + A+ +R KL+ L E +E+ + + F
Sbjct: 52 GVVSLLG----CR-SSWTAAMELSAEYLREKLQRDLEAEHVEVEDTTLNRC-----SCSF 101
Query: 69 RVAVVSSRFEGLSPLQRHRLVHAALAEELGGPVHALAIQARTPAQWRENSQ 119
RV VVS++FEG LQRHRLV+A LAEEL +HA + TP QW Q
Sbjct: 102 RVLVVSAKFEGKPLLQRHRLVNACLAEEL-PHIHAFEQKTLTPDQWARERQ 151
>gi|85797673 bolA-like protein 2B [Homo sapiens]
Length = 152
Score = 56.2 bits (134), Expect = 8e-09
Identities = 42/111 (37%), Positives = 59/111 (53%), Gaps = 11/111 (9%)
Query: 9 GLVSMAGRVCLCQGSAGSGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGSETHF 68
G+VS+ G C+ S+ + A+ +R KL+ L E +E+ + + F
Sbjct: 52 GVVSLLG----CR-SSWTAAMELSAEYLREKLQRDLEAEHVEVEDTTLNRC-----SCSF 101
Query: 69 RVAVVSSRFEGLSPLQRHRLVHAALAEELGGPVHALAIQARTPAQWRENSQ 119
RV VVS++FEG LQRHRLV+A LAEEL +HA + TP QW Q
Sbjct: 102 RVLVVSAKFEGKPLLQRHRLVNACLAEEL-PHIHAFEQKTLTPDQWARERQ 151
>gi|83320070 gasdermin D [Homo sapiens]
Length = 484
Score = 31.2 bits (69), Expect = 0.28
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 10/110 (9%)
Query: 28 AIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGSETHFRVAVVSSRFEGLSPLQRHR 87
++GPVE + + VLE S G VP E V + LS Q
Sbjct: 338 SLGPVEPL------DGPAGAVLECLVLSSGMLVP---ELAIPVVYLLGALTMLSETQHKL 388
Query: 88 LVHAALAEELGGPVHALAIQARTPAQWRENSQLDTSPPCLGGNKKTLGTP 137
L A ++ L GP+ + A W+E S + + PP L GN G P
Sbjct: 389 LAEALESQTLLGPLELVGSLLEQSAPWQERSTM-SLPPGLLGNSWGEGAP 437
>gi|239751180 PREDICTED: hypothetical protein XP_002347740 [Homo
sapiens]
Length = 331
Score = 30.4 bits (67), Expect = 0.48
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 21 QGSAGSGAIGPVEAAIRTKLEEALS-PEVLELRNESGGHAVPPGSETHFRVAVVSSRFEG 79
+G+A P +T++ ALS P ELR + G +V G+ET V+ F
Sbjct: 151 RGAAEQSQGSPCVRQEKTRVSGALSRPSTTELRGRAPGGSVNAGTET---AKVLGEEFVI 207
Query: 80 LSPLQRHRLVHAALAEELGGP 100
L PL + L A +A++ GP
Sbjct: 208 LLPLLQLPLQLAPVADQGLGP 228
>gi|239745668 PREDICTED: hypothetical protein XP_002343538 [Homo
sapiens]
Length = 305
Score = 30.4 bits (67), Expect = 0.48
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 21 QGSAGSGAIGPVEAAIRTKLEEALS-PEVLELRNESGGHAVPPGSETHFRVAVVSSRFEG 79
+G+A P +T++ ALS P ELR + G +V G+ET V+ F
Sbjct: 125 RGAAEQSQGSPCVRQEKTRVSGALSRPSTTELRGRAPGGSVNAGTET---AKVLGEEFVI 181
Query: 80 LSPLQRHRLVHAALAEELGGP 100
L PL + L A +A++ GP
Sbjct: 182 LLPLLQLPLQLAPVADQGLGP 202
>gi|55741868 zinc finger protein 319 [Homo sapiens]
Length = 582
Score = 30.4 bits (67), Expect = 0.48
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 60 VPPGSETHFRVAVVSSRFEGLSPLQRHRLVHAALAEE 96
+P +E F+ V + ++ S LQ+H+L H A AE+
Sbjct: 420 LPGAAERPFKCPVCNKAYKRASALQKHQLAHCAAAEK 456
Score = 26.6 bits (57), Expect = 6.9
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 58 HAVPPGSETHFRVAVVSSRFEGLSPLQRHRLVH 90
H P E + RF+ S LQRHR VH
Sbjct: 476 HRCDPAREKPLKCPDCEKRFKYASDLQRHRRVH 508
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 29.3 bits (64), Expect = 1.1
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 26 SGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGS 64
+GA GP EA+ + +L V E NES GHAVP S
Sbjct: 917 TGAPGPHEAS----QDRSLDLTVKEPSNESNGHAVPANS 951
>gi|119709822 castor homolog 1, zinc finger isoform b [Homo sapiens]
Length = 1166
Score = 29.3 bits (64), Expect = 1.1
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Query: 26 SGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGS 64
+GA GP EA+ + +L V E NES GHAVP S
Sbjct: 917 TGAPGPHEAS----QDRSLDLTVKEPSNESNGHAVPANS 951
>gi|106879204 exocyst complex component 3-like [Homo sapiens]
Length = 746
Score = 29.3 bits (64), Expect = 1.1
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 29 IGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGSETHFRVAVVSSRFEGLSPLQRHRL 88
+ ++A++ L+ AL EV E E G + P GS A+V L L+ +
Sbjct: 382 VANIQASVSQWLQNALDGEVAEWGREHGPNTDPSGSYYSPMPAIV------LQILEENIR 435
Query: 89 VHAALAEELGGPVHALAI 106
V + ++E L VH +A+
Sbjct: 436 VASLVSESLQQRVHGMAL 453
>gi|239754006 PREDICTED: hypothetical protein [Homo sapiens]
Length = 486
Score = 28.9 bits (63), Expect = 1.4
Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 9/99 (9%)
Query: 5 RLVLGLVSMAGRVCLCQGSAGSGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGS 64
RL G GR+ CQ + ++ R E +P+V E R GG V PG
Sbjct: 69 RLTEGAGGFLGRLGQCQAARDDH----LDLGARDAAEAPAAPKVAEARQGWGGSGVAPGG 124
Query: 65 ET--HFRVAVVSSRFEGLSPLQRH---RLVHAALAEELG 98
RV ++ ++ L H R H +AE+ G
Sbjct: 125 NRGGRGRVVLLGAQRGAAHELAVHAEQRAAHKHVAEDGG 163
>gi|239748537 PREDICTED: hypothetical protein [Homo sapiens]
Length = 486
Score = 28.9 bits (63), Expect = 1.4
Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 9/99 (9%)
Query: 5 RLVLGLVSMAGRVCLCQGSAGSGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGS 64
RL G GR+ CQ + ++ R E +P+V E R GG V PG
Sbjct: 69 RLTEGAGGFLGRLGQCQAARDDH----LDLGARDAAEAPAAPKVAEARQGWGGSGVAPGG 124
Query: 65 ET--HFRVAVVSSRFEGLSPLQRH---RLVHAALAEELG 98
RV ++ ++ L H R H +AE+ G
Sbjct: 125 NRGGRGRVVLLGAQRGAAHELAVHAEQRAAHKHVAEDGG 163
>gi|239742520 PREDICTED: hypothetical protein [Homo sapiens]
Length = 486
Score = 28.9 bits (63), Expect = 1.4
Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 9/99 (9%)
Query: 5 RLVLGLVSMAGRVCLCQGSAGSGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGS 64
RL G GR+ CQ + ++ R E +P+V E R GG V PG
Sbjct: 69 RLTEGAGGFLGRLGQCQAARDDH----LDLGARDAAEAPAAPKVAEARQGWGGSGVAPGG 124
Query: 65 ET--HFRVAVVSSRFEGLSPLQRH---RLVHAALAEELG 98
RV ++ ++ L H R H +AE+ G
Sbjct: 125 NRGGRGRVVLLGAQRGAAHELAVHAEQRAAHKHVAEDGG 163
>gi|42476272 zinc finger protein 513 [Homo sapiens]
Length = 541
Score = 28.5 bits (62), Expect = 1.8
Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Query: 12 SMAGRVCLCQGSAGSGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGSETHFRVA 71
+M GR C+ +G AG GA G + +L P N H E FR A
Sbjct: 334 AMCGR-CM-RGEAGGGASGGPQGPSDKGFACSLCPFATHYPNHLARHMKTHSGEKPFRCA 391
Query: 72 VVSSRFEGLSPLQRHRLVH 90
L L+RH+ VH
Sbjct: 392 RCPYASAHLDNLKRHQRVH 410
>gi|86991432 GLI-Kruppel family member GLI2 [Homo sapiens]
Length = 1586
Score = 28.1 bits (61), Expect = 2.4
Identities = 30/126 (23%), Positives = 47/126 (37%), Gaps = 12/126 (9%)
Query: 10 LVSMAGRVCLCQGSAGSGAIGPVEAAIRTKLEEALSPEV-----LELRNESGGHAVPPGS 64
L + G + + +GSG GP +L E + EV L+ R +S +
Sbjct: 758 LPPLPGSGSILENFSGSGGGGPAGLLPNPRLSELSASEVTMLSQLQERRDSS-------T 810
Query: 65 ETHFRVAVVSSRFEGLSPLQRHRLVHAALAEELGGPVHALAIQARTPAQWRENSQLDTSP 124
T VS R G+SP R A G P +A + + P + + +
Sbjct: 811 STVSSAYTVSRRSSGISPYFSSRRSSEASPLGAGRPHNASSADSYDPISTDASRRSSEAS 870
Query: 125 PCLGGN 130
C GG+
Sbjct: 871 QCSGGS 876
>gi|169164295 PREDICTED: hypothetical protein [Homo sapiens]
Length = 225
Score = 28.1 bits (61), Expect = 2.4
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 14/71 (19%)
Query: 1 MLSGRLVLGLVSMAGRVCLCQGSAGSGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAV 60
+L GRLVL ++ G + + G +GP SP L R+ + G +
Sbjct: 92 LLPGRLVLPVLPTPGTRFYLRRTCRQGPVGP------------HSPSSLPRRSPAQGSVL 139
Query: 61 P-PG-SETHFR 69
P PG ETHFR
Sbjct: 140 PGPGKEETHFR 150
>gi|239747902 PREDICTED: hypothetical protein [Homo sapiens]
Length = 225
Score = 28.1 bits (61), Expect = 2.4
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 14/71 (19%)
Query: 1 MLSGRLVLGLVSMAGRVCLCQGSAGSGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAV 60
+L GRLVL ++ G + + G +GP SP L R+ + G +
Sbjct: 92 LLPGRLVLPVLPTPGTRFYLRRTCRQGPVGP------------HSPSSLPRRSPAQGSVL 139
Query: 61 P-PG-SETHFR 69
P PG ETHFR
Sbjct: 140 PGPGKEETHFR 150
>gi|239741797 PREDICTED: hypothetical protein [Homo sapiens]
Length = 225
Score = 28.1 bits (61), Expect = 2.4
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 14/71 (19%)
Query: 1 MLSGRLVLGLVSMAGRVCLCQGSAGSGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAV 60
+L GRLVL ++ G + + G +GP SP L R+ + G +
Sbjct: 92 LLPGRLVLPVLPTPGTRFYLRRTCRQGPVGP------------HSPSSLPRRSPAQGSVL 139
Query: 61 P-PG-SETHFR 69
P PG ETHFR
Sbjct: 140 PGPGKEETHFR 150
>gi|73611906 phosphorylase kinase, beta isoform b [Homo sapiens]
Length = 1086
Score = 26.9 bits (58), Expect = 5.3
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 73 VSSRFEGLSPLQRHRLVHAAL---AEELGGPVHALAIQARTPAQ 113
VS RF PL+ +VH AL ++ L ++ IQ +TP Q
Sbjct: 472 VSMRFSNQGPLENDLVVHVALIAESQRLQVFLNTYGIQTQTPQQ 515
>gi|4505783 phosphorylase kinase, beta isoform a [Homo sapiens]
Length = 1093
Score = 26.9 bits (58), Expect = 5.3
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 73 VSSRFEGLSPLQRHRLVHAAL---AEELGGPVHALAIQARTPAQ 113
VS RF PL+ +VH AL ++ L ++ IQ +TP Q
Sbjct: 479 VSMRFSNQGPLENDLVVHVALIAESQRLQVFLNTYGIQTQTPQQ 522
>gi|239754537 PREDICTED: hypothetical protein [Homo sapiens]
Length = 122
Score = 26.6 bits (57), Expect = 6.9
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Query: 2 LSGRLVLGLVSMAGRVCLCQGSAGSGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVP 61
LSG L S+ R CL G G +GP + LE + ++++ +VP
Sbjct: 44 LSGASWLHTDSVGSRCCLGPGGVGGACLGPTHS-----LEPSKEQQIMDTAETEAALSVP 98
>gi|239749102 PREDICTED: hypothetical protein XP_002346913 [Homo
sapiens]
Length = 122
Score = 26.6 bits (57), Expect = 6.9
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Query: 2 LSGRLVLGLVSMAGRVCLCQGSAGSGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVP 61
LSG L S+ R CL G G +GP + LE + ++++ +VP
Sbjct: 44 LSGASWLHTDSVGSRCCLGPGGVGGACLGPTHS-----LEPSKEQQIMDTAETEAALSVP 98
>gi|239743131 PREDICTED: hypothetical protein XP_002342743 [Homo
sapiens]
Length = 122
Score = 26.6 bits (57), Expect = 6.9
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Query: 2 LSGRLVLGLVSMAGRVCLCQGSAGSGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVP 61
LSG L S+ R CL G G +GP + LE + ++++ +VP
Sbjct: 44 LSGASWLHTDSVGSRCCLGPGGVGGACLGPTHS-----LEPSKEQQIMDTAETEAALSVP 98
>gi|239508788 PREDICTED: hypothetical protein [Homo sapiens]
Length = 122
Score = 26.6 bits (57), Expect = 6.9
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Query: 2 LSGRLVLGLVSMAGRVCLCQGSAGSGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVP 61
LSG L S+ R CL G G +GP + LE + ++++ +VP
Sbjct: 44 LSGASWLHTDSVGSRCCLGPGGVGGACLGPTHS-----LEPSKEQQIMDTAETEAALSVP 98
>gi|28178838 isocitrate dehydrogenase 3 (NAD+) gamma isoform b
precursor [Homo sapiens]
Length = 380
Score = 26.6 bits (57), Expect = 6.9
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 13 MAGRVCLCQGSAGSGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGSETHFRVAV 72
MA +V GSA +GP A+ + E L + RN +PP ++ R V
Sbjct: 1 MALKVATVAGSAAKAVLGP---ALLCRPWEVLGAHEVPSRNIFSEQTIPPSAKYGGRHTV 57
Query: 73 VSSRFEGLSP 82
+G+ P
Sbjct: 58 TMIPGDGIGP 67
>gi|4758582 isocitrate dehydrogenase 3 (NAD+) gamma isoform a
precursor [Homo sapiens]
Length = 393
Score = 26.6 bits (57), Expect = 6.9
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 13 MAGRVCLCQGSAGSGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGSETHFRVAV 72
MA +V GSA +GP A+ + E L + RN +PP ++ R V
Sbjct: 1 MALKVATVAGSAAKAVLGP---ALLCRPWEVLGAHEVPSRNIFSEQTIPPSAKYGGRHTV 57
Query: 73 VSSRFEGLSP 82
+G+ P
Sbjct: 58 TMIPGDGIGP 67
>gi|78486586 bolA-like 3 isoform 1 [Homo sapiens]
Length = 107
Score = 26.6 bits (57), Expect = 6.9
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 63 GSETHFRVAVVSSRFEGLSPLQRHRLVHAALAEELGGPVHALAIQARTP 111
G + + + S F+ +Q+H++V+ AL EE+ +H L I P
Sbjct: 58 GCGAMYEIKIESEEFKEKRTVQQHQMVNQALKEEI-KEMHGLRIFTSVP 105
>gi|122937219 F-box protein 41 [Homo sapiens]
Length = 936
Score = 26.6 bits (57), Expect = 6.9
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 12 SMAGRVCLCQGSA----GSGAIGPVEAAIRTKLEEALSPEVLELR 52
+MAG + C+ SA GSG E ++ E +SPE+L++R
Sbjct: 571 AMAGPLSSCRLSARPEGGSGRGRRAERVSPSRSNEVISPEILKMR 615
>gi|7705495 zinc finger protein 581 [Homo sapiens]
Length = 197
Score = 26.6 bits (57), Expect = 6.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 57 GHAVPPGSETHFRVAVVSSRFEGLSPLQRHRLVHA 91
G + PG + + V S FE +S LQRH + H+
Sbjct: 76 GASGAPGQKKCYSCPVCSRVFEYMSYLQRHSITHS 110
>gi|50541961 flavin containing monooxygenase 3 isoform 2 [Homo
sapiens]
Length = 532
Score = 26.2 bits (56), Expect = 9.0
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 25 GSGAIGPVEAAIRTKLEEALSPEVLELRNESGG 57
G+G G A+IR+ LEE L P E N+ GG
Sbjct: 9 GAGVSGL--ASIRSCLEEGLEPTCFEKSNDIGG 39
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,972,496
Number of Sequences: 37866
Number of extensions: 278879
Number of successful extensions: 911
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 899
Number of HSP's gapped (non-prelim): 50
length of query: 137
length of database: 18,247,518
effective HSP length: 91
effective length of query: 46
effective length of database: 14,801,712
effective search space: 680878752
effective search space used: 680878752
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.