Guide to the Human Genome
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Name: BCLAF1 Sequence: fasta or formatted (920aa) NCBI GI: 7661958
Description:

BCL2-associated transcription factor 1 isoform 1

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Other entries for this name:
alt prot [869aa] BCL2-associated transcription factor 1 isoform 2
alt prot [747aa] BCL2-associated transcription factor 1 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         32           2
 C cysteine            0.2          2           1
 D aspartate           6.0         55           2
 E glutamate           9.3         86           3
 F phenylalanine       3.2         29           2
 G glycine             6.3         58           4
 H histidine           3.4         31           2
 I isoleucine          2.2         20           1
 K lysine             10.0         92           2
 L leucine             3.3         30           2
 M methionine          1.0          9           1
 N asparagine          2.9         27           2
 P proline             5.3         49           2
 Q glutamine           3.4         31           1
 R arginine           12.4        114           3
 S serine             16.4        151           5
 T threonine           4.6         42           2
 V valine              2.6         24           2
 W tryptophan          0.7          6           1
 Y tyrosine            3.5         32           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BCL2-associated transcription factor 1 isoform 1 [Hom... 
BCLAF1                0.898   BCL2-associated transcription factor 1 isoform 2 [H...
LOC731605             0.884   PREDICTED: similar to BCL2-associated transcription...
LOC731605             0.878   PREDICTED: similar to BCL2-associated transcription...
BCLAF1                0.444   BCL2-associated transcription factor 1 isoform 3 [H...
THRAP3                0.277   thyroid hormone receptor associated protein 3 [Homo...
CXorf23               0.043   hypothetical protein LOC256643 
SRRM2                 0.043   splicing coactivator subunit SRm300 
LOC100170229          0.039   hypothetical protein LOC100170229 
SFRS4                 0.038   splicing factor, arginine/serine-rich 4 
SFRS18                0.035   splicing factor, arginine/serine-rich 130 
SFRS18                0.035   splicing factor, arginine/serine-rich 130 
SFRS16                0.035   splicing factor, arginine/serine-rich 16 
SFRS12                0.033   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.033   splicing factor, arginine/serine-rich 12 isoform b [...
SRRM1                 0.032   serine/arginine repetitive matrix 1 
RBBP6                 0.031   retinoblastoma-binding protein 6 isoform 1 
SFRS11                0.031   splicing factor, arginine/serine-rich 11 
ZC3H13                0.030   zinc finger CCCH-type containing 13 
SON                   0.030   SON DNA-binding protein isoform F 
SON                   0.030   SON DNA-binding protein isoform B 
SFRS2B                0.029   splicing factor, arginine/serine-rich 2B 
DDX46                 0.029   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
NKTR                  0.029   natural killer-tumor recognition sequence 
DSPP                  0.029   dentin sialophosphoprotein preproprotein 
RBBP6                 0.028   retinoblastoma-binding protein 6 isoform 2 
PRPF38B               0.028   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
PPIG                  0.028   peptidylprolyl isomerase G 
AFF4                  0.027   ALL1 fused gene from 5q31 
RSRC2                 0.026   arginine/serine-rich coiled-coil 2 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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