SFRS18 5511

Name: SFRS18	Sequence: fasta or formatted (805aa)		NCBI GI: 154146223
Description: splicing factor, arginine/serine-rich 130		Referenced in: Capping and Splicing
Other entries for this name: alt mRNA [805aa] splicing factor, arginine/serine-rich 130
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.3 35 2 C cysteine 0.0 0 0 D aspartate 6.0 48 2 E glutamate 9.4 76 4 F phenylalanine 2.1 17 1 G glycine 5.7 46 2 H histidine 2.6 21 1 I isoleucine 2.6 21 2 K lysine 9.4 76 3 L leucine 3.5 28 2 M methionine 2.4 19 2 N asparagine 3.6 29 2 P proline 6.8 55 3 Q glutamine 7.2 58 3 R arginine 11.6 93 3 S serine 14.5 117 4 T threonine 3.4 27 2 V valine 2.4 19 2 W tryptophan 1.5 12 1 Y tyrosine 1.0 8 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 splicing factor, arginine/serine-rich 130 SFRS18 1.000 splicing factor, arginine/serine-rich 130 SFRS4 0.066 splicing factor, arginine/serine-rich 4 SFRS12 0.065 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.065 splicing factor, arginine/serine-rich 12 isoform b [... PRPF38B 0.065 PRP38 pre-mRNA processing factor 38 (yeast) domain ... LOC100170229 0.061 hypothetical protein LOC100170229 LOC100286959 0.058 PREDICTED: hypothetical protein XP_002343921 SRRM2 0.054 splicing coactivator subunit SRm300 PPIG 0.052 peptidylprolyl isomerase G ZC3H13 0.051 zinc finger CCCH-type containing 13 PNN 0.048 pinin, desmosome associated protein SFRS11 0.047 splicing factor, arginine/serine-rich 11 RSRC2 0.047 arginine/serine-rich coiled-coil 2 isoform a DDX46 0.046 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 PRPF4B 0.045 serine/threonine-protein kinase PRP4K CALD1 0.044 caldesmon 1 isoform 1 RSRC1 0.044 arginine/serine-rich coiled-coil 1 TCHH 0.043 trichohyalin SON 0.041 SON DNA-binding protein isoform F SON 0.041 SON DNA-binding protein isoform B LOC731605 0.040 PREDICTED: similar to BCL2-associated transcription... BCLAF1 0.040 BCL2-associated transcription factor 1 isoform 3 [H... BCLAF1 0.040 BCL2-associated transcription factor 1 isoform 1 [Hom... THOC2 0.040 THO complex 2 LOC100131202 0.040 PREDICTED: hypothetical protein LOC731605 0.039 PREDICTED: similar to BCL2-associated transcription... LOC100133599 0.039 PREDICTED: hypothetical protein BCLAF1 0.039 BCL2-associated transcription factor 1 isoform 2 [H... RBM25 0.039 RNA binding motif protein 25 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.