Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: IL17B Sequence: fasta or formatted (180aa) NCBI GI: 7657228
Description:

interleukin 17B precursor

Referenced in:

Interleukins and Their Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9          7           1
 C cysteine            4.4          8           1
 D aspartate           2.8          5           1
 E glutamate           5.6         10           2
 F phenylalanine       2.8          5           1
 G glycine             5.6         10           1
 H histidine           1.7          3           1
 I isoleucine          3.9          7           1
 K lysine              3.3          6           1
 L leucine            10.0         18           2
 M methionine          4.4          8           1
 N asparagine          3.9          7           1
 P proline            11.7         21           4
 Q glutamine           5.0          9           1
 R arginine           10.0         18           3
 S serine              7.8         14           2
 T threonine           2.8          5           1
 V valine              7.2         13           1
 W tryptophan          1.7          3           1
 Y tyrosine            1.7          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 17B precursor 
IL17D                 0.130   interleukin 17D precursor 
IL17C                 0.096   interleukin 17C 
IL17F                 0.090   interleukin 17F precursor 
IL17A                 0.085   interleukin 17A precursor 
IL25                  0.073   interleukin 25 isoform 2 
IL25                  0.073   interleukin 25 isoform 1 precursor 
KANK3                 0.023   ankyrin repeat domain 47 
CCDC48                0.017   coiled-coil domain containing 48 
ACIN1                 0.014   apoptotic chromatin condensation inducer 1 
COBL                  0.014   cordon-bleu homolog 
TSC22D2               0.011   TSC22 domain family, member 2 
PLEKHA4               0.011   pleckstrin homology domain containing family A memb...
PLEKHA4               0.011   pleckstrin homology domain containing family A memb...
TMEM108               0.011   transmembrane protein 108 
TMEM108               0.011   transmembrane protein 108 
C6orf222              0.011   hypothetical protein LOC389384 
LRRC16B               0.011   leucine rich repeat containing 16B 
LOC100293375          0.008   PREDICTED: hypothetical protein 
MLL4                  0.008   myeloid/lymphoid or mixed-lineage leukemia 4 
LOC100292180          0.008   PREDICTED: hypothetical protein 
LOC100288278          0.008   PREDICTED: hypothetical protein 
LOC100288278          0.008   PREDICTED: hypothetical protein XP_002342826 
LOC100288278          0.008   PREDICTED: hypothetical protein 
C1QL4                 0.008   complement component 1, q subcomponent-like 4 
ITPKC                 0.008   inositol 1,4,5-trisphosphate 3-kinase C 
COL9A2                0.008   alpha 2 type IX collagen 
ARHGEF1               0.008   Rho guanine nucleotide exchange factor 1 isoform 1 [...
MAPKBP1               0.008   mitogen-activated protein kinase binding protein 1 ...
MAPKBP1               0.008   mitogen-activated protein kinase binding protein 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press