CCDC48 15663

Name: CCDC48	Sequence: fasta or formatted (598aa)		NCBI GI: 228008351
Description: coiled-coil domain containing 48		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.0 78 4 C cysteine 2.0 12 1 D aspartate 5.4 32 2 E glutamate 10.9 65 3 F phenylalanine 1.5 9 1 G glycine 7.9 47 2 H histidine 2.5 15 2 I isoleucine 1.2 7 1 K lysine 1.7 10 2 L leucine 12.7 76 2 M methionine 1.0 6 1 N asparagine 1.5 9 1 P proline 5.4 32 2 Q glutamine 5.7 34 2 R arginine 11.4 68 5 S serine 5.5 33 3 T threonine 4.5 27 2 V valine 4.5 27 2 W tryptophan 0.8 5 1 Y tyrosine 1.0 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 48 SPTBN5 0.023 spectrin, beta, non-erythrocytic 5 CEP250 0.021 centrosomal protein 2 NUMA1 0.021 nuclear mitotic apparatus protein 1 CROCC 0.021 ciliary rootlet coiled-coil MYH8 0.021 myosin, heavy chain 8, skeletal muscle, perinatal [... MYH7B 0.020 myosin, heavy polypeptide 7B, cardiac muscle, beta ... MYH10 0.018 myosin, heavy polypeptide 10, non-muscle MYH2 0.018 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.018 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH14 0.017 myosin, heavy chain 14 isoform 1 MYH14 0.017 myosin, heavy chain 14 isoform 2 MYH14 0.017 myosin, heavy chain 14 isoform 3 CDC2L1 0.017 cell division cycle 2-like 1 (PITSLRE proteins) isof... DCTN1 0.017 dynactin 1 isoform 4 DCTN1 0.017 dynactin 1 isoform 3 DCTN1 0.017 dynactin 1 isoform 2 DCTN1 0.017 dynactin 1 isoform 1 CDC2L2 0.017 cell division cycle 2-like 2 isoform 4 CDC2L2 0.017 cell division cycle 2-like 2 isoform 1 CDC2L1 0.017 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.017 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.017 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.017 cell division cycle 2-like 1 (PITSLRE proteins) isof... PLEC1 0.017 plectin 1 isoform 11 PLEC1 0.017 plectin 1 isoform 10 PLEC1 0.017 plectin 1 isoform 8 PLEC1 0.017 plectin 1 isoform 7 PLEC1 0.017 plectin 1 isoform 6 PLEC1 0.017 plectin 1 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.