Guide to the Human Genome
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Name: IL25 Sequence: fasta or formatted (177aa) NCBI GI: 12232485
Description:

interleukin 25 isoform 1 precursor

Referenced in:

Interleukins and Their Receptors

Other entries for this name:
alt prot [161aa] interleukin 25 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0          7           1
 C cysteine            5.6         10           2
 D aspartate           4.0          7           1
 E glutamate           6.2         11           2
 F phenylalanine       1.7          3           1
 G glycine             5.6         10           1
 H histidine           5.1          9           1
 I isoleucine          1.1          2           1
 K lysine              1.7          3           1
 L leucine            11.3         20           2
 M methionine          2.8          5           1
 N asparagine          2.8          5           1
 P proline             9.0         16           2
 Q glutamine           2.8          5           1
 R arginine           11.3         20           2
 S serine              9.0         16           2
 T threonine           4.0          7           1
 V valine              6.2         11           2
 W tryptophan          1.7          3           1
 Y tyrosine            4.0          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 25 isoform 1 precursor 
IL25                  0.905   interleukin 25 isoform 2 
IL17C                 0.109   interleukin 17C 
IL17B                 0.072   interleukin 17B precursor 
IL17D                 0.061   interleukin 17D precursor 
IL17F                 0.053   interleukin 17F precursor 
IL17A                 0.039   interleukin 17A precursor 
LOC100129571          0.017   PREDICTED: similar to hCG1646049 
LOC100129571          0.017   PREDICTED: similar to hCG1646049 
LOC100129571          0.017   PREDICTED: similar to hCG1646049 
C9orf79               0.014   chromosome 9 open reading frame 79 
SEMA6C                0.011   semaphorin Y 
KIAA0319L             0.011   dyslexia susceptibility 2-like 
LOC728417             0.008   PREDICTED: hypothetical protein 
LOC728417             0.008   PREDICTED: hypothetical protein 
LOC728417             0.008   PREDICTED: hypothetical protein isoform 1 
LOC729737             0.008   PREDICTED: hypothetical protein 
THBS4                 0.008   thrombospondin 4 precursor 
ENPP7                 0.008   ectonucleotide pyrophosphatase/phosphodiesterase 7 [...
PTPRN2                0.008   protein tyrosine phosphatase, receptor type, N poly...
PTPRN2                0.008   protein tyrosine phosphatase, receptor type, N poly...
PTPRN2                0.008   protein tyrosine phosphatase, receptor type, N poly...
LOC100289316          0.008   PREDICTED: hypothetical protein 
LOC100289316          0.008   PREDICTED: hypothetical protein XP_002343619 
LOC100127987          0.008   PREDICTED: hypothetical protein LOC100127987 
LOC100127987          0.008   PREDICTED: hypothetical protein LOC100127987 
LOC100127987          0.008   PREDICTED: hypothetical protein LOC100127987 
AHDC1                 0.008   AT hook, DNA binding motif, containing 1 
CDCA5                 0.006   cell division cycle associated 5 
COL11A1               0.006   alpha 1 type XI collagen isoform B preproprotein [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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