Guide to the Human Genome
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Name: MCM6 Sequence: fasta or formatted (821aa) NCBI GI: 7427519
Description:

minichromosome maintenance complex component 6

Referenced in:

Replication Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         54           4
 C cysteine            2.1         17           2
 D aspartate           6.0         49           2
 E glutamate          10.0         82           4
 F phenylalanine       3.9         32           2
 G glycine             5.2         43           2
 H histidine           2.3         19           1
 I isoleucine          6.3         52           2
 K lysine              5.4         44           2
 L leucine             9.4         77           2
 M methionine          1.5         12           1
 N asparagine          3.8         31           1
 P proline             3.5         29           1
 Q glutamine           4.3         35           2
 R arginine            7.1         58           3
 S serine              7.2         59           2
 T threonine           4.9         40           2
 V valine              7.7         63           2
 W tryptophan          0.4          3           1
 Y tyrosine            2.7         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   minichromosome maintenance complex component 6 
MCM2                  0.186   minichromosome maintenance complex component 2 [Homo...
MCM7                  0.184   minichromosome maintenance complex component 7 isofo...
MCM4                  0.175   minichromosome maintenance complex component 4 [Homo...
MCM4                  0.175   minichromosome maintenance complex component 4 [Homo...
MCM7                  0.172   minichromosome maintenance complex component 7 isofo...
MCM3                  0.170   minichromosome maintenance complex component 3 
MCM5                  0.167   minichromosome maintenance complex component 5 [Homo...
MCM8                  0.145   minichromosome maintenance complex component 8 isofo...
MCM8                  0.143   minichromosome maintenance complex component 8 isofo...
MCM9                  0.053   minichromosome maintenance complex component 9 [Homo...
SYCP1                 0.008   synaptonemal complex protein 1 
SUV420H1              0.006   suppressor of variegation 4-20 homolog 1 isoform 1 [...
CCHCR1                0.006   coiled-coil alpha-helical rod protein 1 isoform 1 [...
CCHCR1                0.006   coiled-coil alpha-helical rod protein 1 isoform 2 [...
CCHCR1                0.006   coiled-coil alpha-helical rod protein 1 isoform 3 [...
TUBGCP6               0.006   tubulin, gamma complex associated protein 6 
NIN                   0.006   ninein isoform 4 
NIN                   0.006   ninein isoform 5 
NIN                   0.006   ninein isoform 1 
NIN                   0.006   ninein isoform 2 
LOC727838             0.005   PREDICTED: similar to cancer/testis antigen family ...
C8orf45               0.005   minichromosome maintenance complex component-like i...
C8orf45               0.005   minichromosome maintenance complex component-like i...
LOC100132733          0.005   PREDICTED: similar to FLJ00310 protein 
CEP290                0.004   centrosomal protein 290kDa 
NEB                   0.004   nebulin 
C2orf39               0.004   hypothetical protein LOC92749 
CT47A1                0.004   cancer/testis antigen family 47, member A1 
CT47A2                0.004   cancer/testis antigen family 47, member A2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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