Guide to the Human Genome
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Name: MCM3 Sequence: fasta or formatted (808aa) NCBI GI: 6631095
Description:

minichromosome maintenance complex component 3

Referenced in:

Replication Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         63           3
 C cysteine            1.4         11           1
 D aspartate           8.3         67           3
 E glutamate           8.2         66           3
 F phenylalanine       2.8         23           1
 G glycine             4.7         38           2
 H histidine           2.0         16           1
 I isoleucine          5.0         40           2
 K lysine              7.5         61           4
 L leucine             8.3         67           3
 M methionine          2.5         20           1
 N asparagine          2.5         20           2
 P proline             3.6         29           1
 Q glutamine           5.0         40           2
 R arginine            6.6         53           2
 S serine              7.5         61           3
 T threonine           5.8         47           2
 V valine              7.3         59           2
 W tryptophan          0.0          0           0
 Y tyrosine            3.3         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   minichromosome maintenance complex component 3 
MCM7                  0.188   minichromosome maintenance complex component 7 isofo...
MCM2                  0.187   minichromosome maintenance complex component 2 [Homo...
MCM7                  0.179   minichromosome maintenance complex component 7 isofo...
MCM4                  0.174   minichromosome maintenance complex component 4 [Homo...
MCM4                  0.174   minichromosome maintenance complex component 4 [Homo...
MCM6                  0.174   minichromosome maintenance complex component 6 
MCM5                  0.169   minichromosome maintenance complex component 5 [Homo...
MCM8                  0.137   minichromosome maintenance complex component 8 isofo...
MCM8                  0.135   minichromosome maintenance complex component 8 isofo...
MCM9                  0.050   minichromosome maintenance complex component 9 [Homo...
CALD1                 0.016   caldesmon 1 isoform 4 
CALD1                 0.016   caldesmon 1 isoform 3 
CALD1                 0.015   caldesmon 1 isoform 1 
LOC100294088          0.015   PREDICTED: hypothetical protein, partial 
WDR87                 0.014   NYD-SP11 protein 
RGAG4                 0.014   retrotransposon gag domain containing 4 
CHAF1A                0.013   chromatin assembly factor 1, subunit A (p150) 
KIAA1009              0.013   KIAA1009 protein 
MYH11                 0.013   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.013   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.013   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.013   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
PCLO                  0.013   piccolo isoform 2 
PCLO                  0.013   piccolo isoform 1 
BRD9                  0.012   bromodomain containing 9 isoform 1 
CALD1                 0.012   caldesmon 1 isoform 5 
CALD1                 0.012   caldesmon 1 isoform 2 
TRIM26                0.012   tripartite motif-containing 26 
KIAA1529              0.012   hypothetical protein LOC57653 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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