CEP290 397

Name: CEP290	Sequence: fasta or formatted (2479aa)		NCBI GI: 109255234
Description: centrosomal protein 290kDa		Referenced in: Centrosome Coiled-Coil Proteins Planar Cell Polarity
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.4 135 3 C cysteine 0.5 12 1 D aspartate 4.8 120 2 E glutamate 14.9 369 3 F phenylalanine 1.3 33 2 G glycine 2.1 53 2 H histidine 1.7 43 2 I isoleucine 5.7 142 2 K lysine 12.4 308 3 L leucine 13.1 324 2 M methionine 2.4 59 1 N asparagine 5.6 138 2 P proline 1.4 34 2 Q glutamine 7.7 190 3 R arginine 5.4 134 2 S serine 5.7 141 2 T threonine 4.0 99 3 V valine 3.9 96 2 W tryptophan 0.4 10 1 Y tyrosine 1.6 39 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 centrosomal protein 290kDa GOLGB1 0.052 golgi autoantigen, golgin subfamily b, macrogolgin ... CENPE 0.051 centromere protein E CENPF 0.046 centromere protein F GOLGA4 0.046 golgi autoantigen, golgin subfamily a, 4 CEP250 0.043 centrosomal protein 2 AKAP9 0.042 A-kinase anchor protein 9 isoform 2 AKAP9 0.042 A-kinase anchor protein 9 isoform 3 TPR 0.036 nuclear pore complex-associated protein TPR EEA1 0.035 early endosome antigen 1, 162kD TCHH 0.034 trichohyalin TRIP11 0.034 thyroid hormone receptor interactor 11 GCC2 0.033 GRIP and coiled-coil domain-containing 2 NUMA1 0.032 nuclear mitotic apparatus protein 1 MYH9 0.031 myosin, heavy polypeptide 9, non-muscle MYH11 0.031 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.031 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.031 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.031 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... PLEC1 0.031 plectin 1 isoform 11 PLEC1 0.031 plectin 1 isoform 10 PLEC1 0.031 plectin 1 isoform 8 PLEC1 0.031 plectin 1 isoform 7 PLEC1 0.031 plectin 1 isoform 6 PLEC1 0.031 plectin 1 isoform 3 PLEC1 0.031 plectin 1 isoform 2 PLEC1 0.031 plectin 1 isoform 1 CCDC88A 0.030 coiled-coil domain containing 88A isoform 1 CCDC88A 0.030 coiled-coil domain containing 88A isoform 2 MYH10 0.030 myosin, heavy polypeptide 10, non-muscle Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.