Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FAM24A Sequence: fasta or formatted (105aa) NCBI GI: 71274136
Description:

family with sequence similarity 24, member A

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.4         13           2
 C cysteine            8.6          9           3
 D aspartate           5.7          6           1
 E glutamate           2.9          3           1
 F phenylalanine       2.9          3           1
 G glycine             3.8          4           1
 H histidine           1.9          2           1
 I isoleucine          3.8          4           1
 K lysine              8.6          9           1
 L leucine             9.5         10           2
 M methionine          5.7          6           1
 N asparagine          3.8          4           1
 P proline             4.8          5           2
 Q glutamine           1.9          2           1
 R arginine            1.9          2           1
 S serine              8.6          9           2
 T threonine           3.8          4           2
 V valine              7.6          8           2
 W tryptophan          1.0          1           1
 Y tyrosine            1.0          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   family with sequence similarity 24, member A 
FAM24B                0.598   hypothetical protein LOC196792 
VWF                   0.026   von Willebrand factor preproprotein 
ZC3H12B               0.021   zinc finger CCCH-type containing 12B 
CBLC                  0.015   Cas-Br-M (murine) ecotropic retroviral transforming...
CBLC                  0.015   Cas-Br-M (murine) ecotropic retroviral transforming...
LST1                  0.010   leukocyte specific transcript 1 isoform 1 
ANK3                  0.010   ankyrin 3 isoform 2 
KRTAP4-8              0.005   PREDICTED: keratin associated protein 4-8 isoform 3...
KRTAP4-8              0.005   PREDICTED: keratin associated protein 4-8 isoform 2...
KRTAP4-8              0.005   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.005   PREDICTED: similar to keratin associated protein 4-...
LOC100134267          0.005   PREDICTED: similar to keratin associated protein 4-...
LOC100134267          0.005   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.005   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-9              0.005   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-8              0.005   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.005   keratin associated protein 4.8 
KRTAP4-9              0.005   keratin associated protein 4-9 
TACSTD2               0.005   tumor-associated calcium signal transducer 2 precur...
KRTAP9-9              0.005   keratin associated protein 9-9 
LOC728318             0.005   PREDICTED: hypothetical protein 
LOC728341             0.005   PREDICTED: keratin-associated protein 9-2-like 1-li...
LOC728318             0.005   PREDICTED: hypothetical protein 
LOC728318             0.005   PREDICTED: hypothetical protein 
NOTCH4                0.005   notch4 preproprotein 
STRA8                 0.005   STRA8 
KRTAP9-8              0.005   keratin associated protein 9.8 
KRTAP9-2              0.005   keratin associated protein 9.2 
KRTAP9-4              0.005   keratin associated protein 9-4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press