Guide to the Human Genome
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Name: KRTAP4-8 Sequence: fasta or formatted (193aa) NCBI GI: 239758032
Description:

PREDICTED: keratin associated protein 4-8 isoform 2

Referenced in:

Keratins

Other entries for this name:
alt prot [185aa] keratin associated protein 4.8
alt prot [185aa] PREDICTED: keratin associated protein 4.8
alt prot [195aa] PREDICTED: keratin associated protein 4-8
alt prot [220aa] PREDICTED: keratin associated protein 4-8 isoform 1
alt prot [204aa] PREDICTED: keratin associated protein 4-8 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.5          1           1
 C cysteine           34.7         67           3
 D aspartate           1.0          2           1
 E glutamate           1.0          2           1
 F phenylalanine       0.0          0           0
 G glycine             2.1          4           1
 H histidine           1.0          2           1
 I isoleucine          2.1          4           1
 K lysine              1.6          3           1
 L leucine             1.0          2           1
 M methionine          0.5          1           1
 N asparagine          1.6          3           1
 P proline             9.8         19           1
 Q glutamine           6.7         13           1
 R arginine            6.2         12           1
 S serine             17.1         33           2
 T threonine           5.2         10           2
 V valine              6.2         12           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.6          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: keratin associated protein 4-8 isoform 2... 
LOC100134267          1.000   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.976   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.976   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.967   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.967   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.950   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.895   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.895   keratin associated protein 4.8 
KRTAP4-11             0.891   keratin associated protein 4-11 
KRTAP4-9              0.869   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.864   keratin associated protein 4-9 
KRTAP4-9              0.838   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-12             0.816   keratin associated protein 4-12 
KRTAP4-5              0.775   keratin associated protein 4-5 
KRTAP4-7              0.597   keratin associated protein 4-7 
KRTAP4-7              0.597   PREDICTED: keratin associated protein 4-7 
KRTAP4-3              0.586   keratin associated protein 4-3 
KRTAP4-4              0.569   keratin associated protein 4.4 
KRTAP4-2              0.457   keratin associated protein 4-2 
LOC728318             0.431   PREDICTED: hypothetical protein 
LOC728318             0.431   PREDICTED: hypothetical protein 
LOC728318             0.429   PREDICTED: hypothetical protein 
LOC728341             0.394   PREDICTED: keratin-associated protein 9-2-like 1-li...
KRTAP9-2              0.381   keratin associated protein 9.2 
KRTAP10-11            0.379   keratin associated protein 10-11 
KRTAP10-7             0.365   keratin associated protein 10-7 
KRTAP10-5             0.361   keratin associated protein 10-5 
KRTAP9-3              0.357   keratin associated protein 9.3 
KRTAP10-6             0.357   keratin associated protein 10-6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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